RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CCDC146Q8IYE0 955 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 TMC2Q8TDI7 906 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 CCDC102AQ96A19 550 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 ANP32EQ9BTT0 268 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 VIRMAQ69YN4 1812 aaKnown RBP3.94□□□□□ -1.78
CHD9-216ENST00000565803 TNRC6CQ9HCJ0 1690 aaKnown RBP3.94□□□□□ -1.78
CHD9-216ENST00000565803 ERBINQ96RT1 1412 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 FMN2Q9NZ56 1722 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 NPHP1O15259 732 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 HOXB1P14653 301 aaPredicted RBP3.94□□□□□ -1.78
CHD9-216ENST00000565803 ARMCX6Q7L4S7 300 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 DHX38Q92620 1227 aaKnown RBP3.94□□□□□ -1.78
CHD9-216ENST00000565803 MPHOSPH6Q99547 160 aaKnown RBP3.94□□□□□ -1.78
CHD9-216ENST00000565803 EPAS1Q99814 870 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 ZSWIM4Q9H7M6 989 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 RBM47A0AV96 593 aaKnown RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 POM121CA8CG34 1229 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 HSPA6P17066 643 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 USP5P45974 858 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 CCAR1Q8IX12 1150 aaKnown RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 AFAP1Q8N556 730 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 DNAJC5GQ8N7S2 189 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 IPO4Q8TEX9 1081 aaKnown RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 CDCA7Q9BWT1 371 aaPredicted RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 TRIM34Q9BYJ4 488 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 KIF13BQ9NQT8 1826 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 LMOD1P29536 600 aaPredicted RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 KRBA2Q6ZNG9 492 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 WDR75Q8IWA0 830 aaKnown RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 PDILTQ8N807 584 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 SNRKQ9NRH2 765 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 SBNO2Q9Y2G9 1366 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 PARNO95453 639 aaKnown RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 DNAJA1P31689 397 aaKnown RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 EN1Q05925 392 aaPredicted RBP3.93□□□□□ -1.78
CHD9-216ENST00000565803 PTPROQ16827 1216 aa3.93□□□□□ -1.78
CHD9-216ENST00000565803 HOXA2O43364 376 aa3.92□□□□□ -1.78
CHD9-216ENST00000565803 STK10O94804 968 aaKnown RBP3.92□□□□□ -1.78
CHD9-216ENST00000565803 AMHR2Q16671 573 aa3.92□□□□□ -1.78
CHD9-216ENST00000565803 PROCA1Q8NCQ7 364 aaPredicted RBP3.92□□□□□ -1.78
CHD9-216ENST00000565803 LRRC59Q96AG4 307 aaKnown RBP3.92□□□□□ -1.78
CHD9-216ENST00000565803 TCEAL9Q9UHQ7 104 aa3.92□□□□□ -1.78
CHD9-216ENST00000565803 C11orf95C9JLR9 678 aaPredicted RBP3.92□□□□□ -1.78
CHD9-216ENST00000565803 DPYSL4O14531 572 aa3.92□□□□□ -1.78
CHD9-216ENST00000565803 SAFB2Q14151 953 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD9-216ENST00000565803 EVI5LQ96CN4 794 aa3.92□□□□□ -1.78
CHD9-216ENST00000565803 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.92□□□□□ -1.78
CHD9-216ENST00000565803 CHPF2Q9P2E5 772 aa3.92□□□□□ -1.78
CHD9-216ENST00000565803 SALL2Q9Y467 1007 aaPredicted RBP3.92□□□□□ -1.78
CHD9-216ENST00000565803 EVI5O60447 810 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 ERCC3P19447 782 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 ARID4AP29374 1257 aaPredicted RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 PTGDRQ13258 359 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 PPP4R4Q6NUP7 873 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 BRINP3Q76B58 766 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 PRPF38AQ8NAV1 312 aaKnown RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 PMM1Q92871 262 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 USTQ9Y2C2 406 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 TBX22Q9Y458 520 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 KIAA1551Q9HCM1 1747 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 CLGNO14967 610 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 S100BP04271 92 aaPredicted RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 MARSP56192 900 aaKnown RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 HDGFL1Q5TGJ6 251 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 CAMKK2Q96RR4 588 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 CCDC189A1A4V9 331 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 CALRP27797 417 aaKnown RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 RNF187Q5TA31 235 aaPredicted RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 RINLQ6ZS11 566 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 GPATCH3Q96I76 525 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 NAP1L4Q99733 375 aaKnown RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 ISY1Q9ULR0 285 aaKnown RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 PKD1L3Q7Z443 1732 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 C1orf167Q5SNV9 1468 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 TOPAZ1Q8N9V7 1692 aa3.91□□□□□ -1.78
CHD9-216ENST00000565803 SPAG9O60271 1321 aaKnown RBP3.91□□□□□ -1.78
CHD9-216ENST00000565803 CSPP1Q1MSJ5 1256 aa3.9□□□□□ -1.78
CHD9-216ENST00000565803 CASC1Q6TDU7 716 aa3.9□□□□□ -1.78
CHD9-216ENST00000565803 GIGYF2Q6Y7W6 1299 aaKnown RBP3.9□□□□□ -1.78
CHD9-216ENST00000565803 RBM46Q8TBY0 533 aaKnown RBP3.9□□□□□ -1.78
CHD9-216ENST00000565803 LNPKQ9C0E8 428 aa3.9□□□□□ -1.78
CHD9-216ENST00000565803 UBA5Q9GZZ9 404 aa3.9□□□□□ -1.78
CHD9-216ENST00000565803 LMO7Q8WWI1 1683 aa3.9□□□□□ -1.78
CHD9-216ENST00000565803 LTKP29376 864 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 BMS1Q14692 1282 aaKnown RBP3.9□□□□□ -1.79
CHD9-216ENST00000565803 ERICH6BQ5W0A0 696 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 GJD4Q96KN9 370 aaPredicted RBP3.9□□□□□ -1.79
CHD9-216ENST00000565803 MTA3Q9BTC8 594 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 PCDHGA10Q9Y5H3 936 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 CEP162Q5TB80 1403 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 ZC3H4Q9UPT8 1303 aaKnown RBP3.9□□□□□ -1.79
CHD9-216ENST00000565803 NHSQ6T4R5 1651 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 ATP7BP35670 1465 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 GRXCR2A6NFK2 248 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 SEC24BO95487 1268 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 ATP2B1P20020 1258 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 BRD3Q15059 726 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 VPS72Q15906 364 aa3.9□□□□□ -1.79
CHD9-216ENST00000565803 MEX3CQ5U5Q3 659 aaKnown RBP3.9□□□□□ -1.79
CHD9-216ENST00000565803 C19orf44Q9H6X5 657 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms