RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 ESF1Q9H501 851 aaKnown RBP7.41□□□□□ -1.22
RBFOX1-216ENST00000564850 DNAAF2Q9NVR5 837 aaKnown RBP7.41□□□□□ -1.22
RBFOX1-216ENST00000564850 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
RBFOX1-216ENST00000564850 M0R082 166 aa7.4□□□□□ -1.22
RBFOX1-216ENST00000564850 ZNF417Q8TAU3 575 aa7.4□□□□□ -1.22
RBFOX1-216ENST00000564850 ZNF587Q96SQ5 575 aaPredicted RBP7.4□□□□□ -1.22
RBFOX1-216ENST00000564850 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
RBFOX1-216ENST00000564850 SCTRP47872 440 aa7.39□□□□□ -1.23
RBFOX1-216ENST00000564850 IL2RAP01589 272 aa7.38□□□□□ -1.23
RBFOX1-216ENST00000564850 SSTR4P31391 388 aa7.38□□□□□ -1.23
RBFOX1-216ENST00000564850 NRG1Q02297 640 aaPredicted RBP7.38□□□□□ -1.23
RBFOX1-216ENST00000564850 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
RBFOX1-216ENST00000564850 OSBPL3Q9H4L5 887 aa7.38□□□□□ -1.23
RBFOX1-216ENST00000564850 RTN4Q9NQC3 1192 aaKnown RBP7.38□□□□□ -1.23
RBFOX1-216ENST00000564850 TRAK2O60296 914 aa7.37□□□□□ -1.23
RBFOX1-216ENST00000564850 SELPP16109 830 aa7.37□□□□□ -1.23
RBFOX1-216ENST00000564850 CLK2P49760 499 aaKnown RBP7.37□□□□□ -1.23
RBFOX1-216ENST00000564850 TNP2Q05952 138 aa7.37□□□□□ -1.23
RBFOX1-216ENST00000564850 COL9A3Q14050 684 aaPredicted RBP7.37□□□□□ -1.23
RBFOX1-216ENST00000564850 TBC1D9Q6ZT07 1266 aa7.37□□□□□ -1.23
RBFOX1-216ENST00000564850 PRDM6Q9NQX0 595 aa7.37□□□□□ -1.23
RBFOX1-216ENST00000564850 KHNYNO15037 678 aaKnown RBP7.36□□□□□ -1.23
RBFOX1-216ENST00000564850 GNRH1P01148 92 aa7.36□□□□□ -1.23
RBFOX1-216ENST00000564850 RNF20Q5VTR2 975 aa7.35□□□□□ -1.23
RBFOX1-216ENST00000564850 LENG1Q96BZ8 264 aaPredicted RBP7.35□□□□□ -1.23
RBFOX1-216ENST00000564850 HCN2Q9UL51 889 aa7.35□□□□□ -1.23
RBFOX1-216ENST00000564850 OAS3Q9Y6K5 1087 aaKnown RBP7.35□□□□□ -1.23
RBFOX1-216ENST00000564850 TRAPPC3LQ5T215 181 aa7.34□□□□□ -1.23
RBFOX1-216ENST00000564850 RHBDD1Q8TEB9 315 aa7.34□□□□□ -1.23
RBFOX1-216ENST00000564850 SSBP4Q9BWG4 385 aaPredicted RBP7.34□□□□□ -1.23
RBFOX1-216ENST00000564850 FHDC1Q9C0D6 1143 aaPredicted RBP7.34□□□□□ -1.23
RBFOX1-216ENST00000564850 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.23
RBFOX1-216ENST00000564850 NID1P14543 1247 aa7.33□□□□□ -1.24
RBFOX1-216ENST00000564850 PCDHB11Q9Y5F2 797 aa7.33□□□□□ -1.24
RBFOX1-216ENST00000564850 GP2P55259 537 aaKnown RBP7.32□□□□□ -1.24
RBFOX1-216ENST00000564850 C8orf86Q6ZUL3 223 aa7.32□□□□□ -1.24
RBFOX1-216ENST00000564850 USP21Q9UK80 565 aa7.32□□□□□ -1.24
RBFOX1-216ENST00000564850 HRH3Q9Y5N1 445 aa7.32□□□□□ -1.24
RBFOX1-216ENST00000564850 ALBP02768 609 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 LCE4AQ5TA78 99 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 SHISA2Q6UWI4 295 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 SYT9Q86SS6 491 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 MICALL1Q8N3F8 863 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 C1orf216Q8TAB5 229 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 EPS8L1Q8TE68 723 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 MDFIQ99750 246 aa7.31□□□□□ -1.24
RBFOX1-216ENST00000564850 CD97P48960 835 aa7.3□□□□□ -1.24
RBFOX1-216ENST00000564850 XAGE2Q96GT9 111 aa7.3□□□□□ -1.24
RBFOX1-216ENST00000564850 ADARB2-AS1A8MUL3 147 aa7.29□□□□□ -1.24
RBFOX1-216ENST00000564850 ATP4AP20648 1035 aa7.29□□□□□ -1.24
RBFOX1-216ENST00000564850 RAC1P63000 192 aa7.29□□□□□ -1.24
RBFOX1-216ENST00000564850 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
RBFOX1-216ENST00000564850 STARD13Q9Y3M8 1113 aa7.29□□□□□ -1.24
RBFOX1-216ENST00000564850 A0A0A0MRY4 1105 aa7.28□□□□□ -1.24
RBFOX1-216ENST00000564850 FAM157BP0CG42 384 aa7.28□□□□□ -1.24
RBFOX1-216ENST00000564850 BARGINQ6ZT62 677 aa7.28□□□□□ -1.24
RBFOX1-216ENST00000564850 POLR3EQ9NVU0 708 aa7.28□□□□□ -1.24
RBFOX1-216ENST00000564850 A0A1W2PNR3 127 aa7.27□□□□□ -1.25
RBFOX1-216ENST00000564850 SIN3BO75182 1162 aa7.27□□□□□ -1.25
RBFOX1-216ENST00000564850 ARSJQ5FYB0 599 aaPredicted RBP7.27□□□□□ -1.25
RBFOX1-216ENST00000564850 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.25
RBFOX1-216ENST00000564850 ESCO1Q5FWF5 840 aa7.25□□□□□ -1.25
RBFOX1-216ENST00000564850 SLC51AQ86UW1 340 aa7.25□□□□□ -1.25
RBFOX1-216ENST00000564850 AIDAQ96BJ3 306 aa7.25□□□□□ -1.25
RBFOX1-216ENST00000564850 STRN4Q9NRL3 753 aa7.25□□□□□ -1.25
RBFOX1-216ENST00000564850 ATP1B4Q9UN42 357 aaPredicted RBP7.25□□□□□ -1.25
RBFOX1-216ENST00000564850 GJA3Q9Y6H8 435 aa7.25□□□□□ -1.25
RBFOX1-216ENST00000564850 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
RBFOX1-216ENST00000564850 AP1G2O75843 785 aa7.23□□□□□ -1.25
RBFOX1-216ENST00000564850 MYCP01106 439 aaPredicted RBP7.23□□□□□ -1.25
RBFOX1-216ENST00000564850 FSTP19883 344 aa7.23□□□□□ -1.25
RBFOX1-216ENST00000564850 TLR1Q15399 786 aa7.23□□□□□ -1.25
RBFOX1-216ENST00000564850 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
RBFOX1-216ENST00000564850 ZBBXA8MT70 800 aa7.22□□□□□ -1.25
RBFOX1-216ENST00000564850 KIAA1324LA8MWY0 1029 aaPredicted RBP7.22□□□□□ -1.25
RBFOX1-216ENST00000564850 LILRB5O75023 590 aa7.22□□□□□ -1.25
RBFOX1-216ENST00000564850 ADH7P40394 386 aa7.22□□□□□ -1.25
RBFOX1-216ENST00000564850 TNFRSF25Q93038 417 aa7.22□□□□□ -1.25
RBFOX1-216ENST00000564850 RSPH6AQ9H0K4 717 aa7.22□□□□□ -1.25
RBFOX1-216ENST00000564850 HMX1Q9NP08 348 aaPredicted RBP7.22□□□□□ -1.25
RBFOX1-216ENST00000564850 TRIM66O15016 1216 aa7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 EFSO43281 561 aa7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 ZMYND10O75800 440 aa7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 SAMD5Q5TGI4 173 aa7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 OGFOD2Q6N063 350 aa7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 C20orf204Q6ZNR8 217 aa7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 CCER1Q8TC90 406 aaPredicted RBP7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 WFDC12Q8WWY7 111 aa7.2□□□□□ -1.26
RBFOX1-216ENST00000564850 C8AP07357 584 aa7.19□□□□□ -1.26
RBFOX1-216ENST00000564850 TATP17735 454 aaPredicted RBP7.19□□□□□ -1.26
RBFOX1-216ENST00000564850 IREB2P48200 963 aaKnown RBP7.19□□□□□ -1.26
RBFOX1-216ENST00000564850 NBPF1Q3BBV0 1214 aa7.19□□□□□ -1.26
RBFOX1-216ENST00000564850 MED26O95402 600 aa7.18□□□□□ -1.26
RBFOX1-216ENST00000564850 FMR1NBQ8N0W7 255 aaPredicted RBP7.18□□□□□ -1.26
RBFOX1-216ENST00000564850 ZIC5Q96T25 663 aa7.18□□□□□ -1.26
RBFOX1-216ENST00000564850 NIFKQ9BYG3 293 aaKnown RBP7.18□□□□□ -1.26
RBFOX1-216ENST00000564850 FBXO45P0C2W1 286 aa7.17□□□□□ -1.26
RBFOX1-216ENST00000564850 NOS3P29474 1203 aa7.17□□□□□ -1.26
RBFOX1-216ENST00000564850 USP17L8P0C7I0 530 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms