RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 AMIGO3Q86WK7 504 aa18.02■□□□□ 0.48
CNOT1-206ENST00000564557 SYT17Q9BSW7 474 aa18.02■□□□□ 0.48
CNOT1-206ENST00000564557 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.48
CNOT1-206ENST00000564557 TAF7Q15545 349 aaPredicted RBP18.01■□□□□ 0.47
CNOT1-206ENST00000564557 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
CNOT1-206ENST00000564557 ARHGEF1Q92888 912 aaKnown RBP18.01■□□□□ 0.47
CNOT1-206ENST00000564557 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
CNOT1-206ENST00000564557 RIPK4P57078 832 aa18■□□□□ 0.47
CNOT1-206ENST00000564557 COL5A3P25940 1745 aaPredicted RBP17.99■□□□□ 0.47
CNOT1-206ENST00000564557 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
CNOT1-206ENST00000564557 LMOD3Q0VAK6 560 aa17.99■□□□□ 0.47
CNOT1-206ENST00000564557 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
CNOT1-206ENST00000564557 NLGN1Q8N2Q7 840 aa17.99■□□□□ 0.47
CNOT1-206ENST00000564557 PNISRQ8TF01 805 aaKnown RBP17.99■□□□□ 0.47
CNOT1-206ENST00000564557 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
CNOT1-206ENST00000564557 ZPR1O75312 459 aa17.98■□□□□ 0.47
CNOT1-206ENST00000564557 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
CNOT1-206ENST00000564557 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
CNOT1-206ENST00000564557 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
CNOT1-206ENST00000564557 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
CNOT1-206ENST00000564557 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
CNOT1-206ENST00000564557 ADAMTS8Q9UP79 889 aa17.97■□□□□ 0.47
CNOT1-206ENST00000564557 TJP1Q07157 1748 aa17.97■□□□□ 0.47
CNOT1-206ENST00000564557 KCNQ3O43525 872 aa17.96■□□□□ 0.47
CNOT1-206ENST00000564557 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
CNOT1-206ENST00000564557 POLA2Q14181 598 aa17.96■□□□□ 0.47
CNOT1-206ENST00000564557 MYH14Q7Z406 1995 aaKnown RBP17.96■□□□□ 0.47
CNOT1-206ENST00000564557 SIPA1L3O60292 1781 aaPredicted RBP17.95■□□□□ 0.46
CNOT1-206ENST00000564557 SNRPA1P09661 255 aaKnown RBP17.95■□□□□ 0.46
CNOT1-206ENST00000564557 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
CNOT1-206ENST00000564557 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
CNOT1-206ENST00000564557 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
CNOT1-206ENST00000564557 DLG5Q8TDM6 1919 aa17.94■□□□□ 0.46
CNOT1-206ENST00000564557 A0A087WZG4 1122 aa17.94■□□□□ 0.46
CNOT1-206ENST00000564557 MMP10P09238 476 aa17.94■□□□□ 0.46
CNOT1-206ENST00000564557 THUMPD2Q9BTF0 503 aaKnown RBP17.94■□□□□ 0.46
CNOT1-206ENST00000564557 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
CNOT1-206ENST00000564557 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
CNOT1-206ENST00000564557 SOS1Q07889 1333 aaPredicted RBP17.94■□□□□ 0.46
CNOT1-206ENST00000564557 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
CNOT1-206ENST00000564557 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
CNOT1-206ENST00000564557 COL24A1Q17RW2 1714 aa17.93■□□□□ 0.46
CNOT1-206ENST00000564557 GYS1P13807 737 aa17.93■□□□□ 0.46
CNOT1-206ENST00000564557 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
CNOT1-206ENST00000564557 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
CNOT1-206ENST00000564557 CD2APQ9Y5K6 639 aa17.93■□□□□ 0.46
CNOT1-206ENST00000564557 GPR162Q16538 588 aa17.92■□□□□ 0.46
CNOT1-206ENST00000564557 USP42Q9H9J4 1324 aaKnown RBP17.92■□□□□ 0.46
CNOT1-206ENST00000564557 COL15A1P39059 1388 aa17.91■□□□□ 0.46
CNOT1-206ENST00000564557 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
CNOT1-206ENST00000564557 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
CNOT1-206ENST00000564557 A1BGP04217 495 aa17.9■□□□□ 0.46
CNOT1-206ENST00000564557 IL6STP40189 918 aaPredicted RBP17.9■□□□□ 0.46
CNOT1-206ENST00000564557 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
CNOT1-206ENST00000564557 NARFQ9UHQ1 456 aa17.9■□□□□ 0.46
CNOT1-206ENST00000564557 USP16Q9Y5T5 823 aa17.9■□□□□ 0.46
CNOT1-206ENST00000564557 NLGN2Q8NFZ4 835 aa17.89■□□□□ 0.45
CNOT1-206ENST00000564557 EIF5P55010 431 aaKnown RBP17.88■□□□□ 0.45
CNOT1-206ENST00000564557 FKBP8Q14318 412 aa17.88■□□□□ 0.45
CNOT1-206ENST00000564557 LAS1LQ9Y4W2 734 aaKnown RBP17.88■□□□□ 0.45
CNOT1-206ENST00000564557 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
CNOT1-206ENST00000564557 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
CNOT1-206ENST00000564557 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
CNOT1-206ENST00000564557 APAF1O14727 1248 aa17.86■□□□□ 0.45
CNOT1-206ENST00000564557 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
CNOT1-206ENST00000564557 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
CNOT1-206ENST00000564557 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
CNOT1-206ENST00000564557 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
CNOT1-206ENST00000564557 CALD1Q05682 793 aaKnown RBP17.84■□□□□ 0.45
CNOT1-206ENST00000564557 CCDC184Q52MB2 194 aa17.84■□□□□ 0.45
CNOT1-206ENST00000564557 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
CNOT1-206ENST00000564557 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
CNOT1-206ENST00000564557 GRIN3BO60391 1043 aa17.83■□□□□ 0.44
CNOT1-206ENST00000564557 BICDL1Q6ZP65 573 aa17.83■□□□□ 0.44
CNOT1-206ENST00000564557 NPHP1O15259 732 aa17.82■□□□□ 0.44
CNOT1-206ENST00000564557 TM4SF1P30408 202 aa17.82■□□□□ 0.44
CNOT1-206ENST00000564557 TGFB2P61812 414 aa17.82■□□□□ 0.44
CNOT1-206ENST00000564557 NFIXQ14938 502 aa17.82■□□□□ 0.44
CNOT1-206ENST00000564557 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
CNOT1-206ENST00000564557 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
CNOT1-206ENST00000564557 EIF2S2P20042 333 aaKnown RBP17.81■□□□□ 0.44
CNOT1-206ENST00000564557 YY1P25490 414 aa17.81■□□□□ 0.44
CNOT1-206ENST00000564557 DDR1Q08345 913 aa17.81■□□□□ 0.44
CNOT1-206ENST00000564557 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
CNOT1-206ENST00000564557 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
CNOT1-206ENST00000564557 SERPINB2P05120 415 aa17.8■□□□□ 0.44
CNOT1-206ENST00000564557 BCL2L12Q9HB09 334 aa17.8■□□□□ 0.44
CNOT1-206ENST00000564557 CHL1O00533 1208 aa17.79■□□□□ 0.44
CNOT1-206ENST00000564557 MYL6BP14649 208 aa17.79■□□□□ 0.44
CNOT1-206ENST00000564557 SETDB2Q96T68 719 aa17.79■□□□□ 0.44
CNOT1-206ENST00000564557 WWC3Q9ULE0 1092 aa17.79■□□□□ 0.44
CNOT1-206ENST00000564557 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
CNOT1-206ENST00000564557 CAMTA2O94983 1202 aa17.78■□□□□ 0.44
CNOT1-206ENST00000564557 GNAI1P63096 354 aa17.78■□□□□ 0.44
CNOT1-206ENST00000564557 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
CNOT1-206ENST00000564557 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
CNOT1-206ENST00000564557 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
CNOT1-206ENST00000564557 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
CNOT1-206ENST00000564557 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
CNOT1-206ENST00000564557 A0A0G2JLW4 131 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms