RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 MSX1P28360 303 aa6.67□□□□□ -1.34
CAPN3-212ENST00000564503 GSK3AP49840 483 aa6.67□□□□□ -1.34
CAPN3-212ENST00000564503 PCDHGA11Q9Y5H2 935 aa6.67□□□□□ -1.34
CAPN3-212ENST00000564503 WDR97A6NE52 1622 aa6.67□□□□□ -1.34
CAPN3-212ENST00000564503 TMEM229AB2RXF0 380 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 SMTNP53814 917 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 NFATC2IPQ8NCF5 419 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 RUBCNLQ9H714 662 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 SERTAD1Q9UHV2 236 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 CCNB3Q8WWL7 1395 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 CUX1P39880 1505 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
CAPN3-212ENST00000564503 POM121CA8CG34 1229 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 LZTS3O60299 673 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-212ENST00000564503 CSB-PGBD3P0DP91 1061 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 MX2P20592 715 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 MARSP56192 900 aaKnown RBP6.65□□□□□ -1.34
CAPN3-212ENST00000564503 MAP3K10Q02779 954 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 UBAP2LQ14157 1087 aaKnown RBP6.65□□□□□ -1.34
CAPN3-212ENST00000564503 EML3Q32P44 896 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 PGBD3Q8N328 593 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 SLC4A9Q96Q91 983 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 CFHR5Q9BXR6 569 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 NOD1Q9Y239 953 aa6.65□□□□□ -1.34
CAPN3-212ENST00000564503 ARHGAP35Q9NRY4 1499 aa6.65□□□□□ -1.35
CAPN3-212ENST00000564503 PLA2G4AP47712 749 aa6.64□□□□□ -1.35
CAPN3-212ENST00000564503 LBRQ14739 615 aaKnown RBP6.64□□□□□ -1.35
CAPN3-212ENST00000564503 TMEM132AQ24JP5 1023 aa6.64□□□□□ -1.35
CAPN3-212ENST00000564503 ADAMTS19Q8TE59 1207 aa6.64□□□□□ -1.35
CAPN3-212ENST00000564503 ACDQ96AP0 544 aa6.64□□□□□ -1.35
CAPN3-212ENST00000564503 NIFKQ9BYG3 293 aaKnown RBP6.64□□□□□ -1.35
CAPN3-212ENST00000564503 KIF27Q86VH2 1401 aa6.64□□□□□ -1.35
CAPN3-212ENST00000564503 A6NJY4 79 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 CDK2AP1O14519 115 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 BCRP11274 1271 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 GTF2IP78347 998 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 RASSF7Q02833 373 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 NCOA4Q13772 614 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 EFHC2Q5JST6 749 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 HDGFL1Q5TGJ6 251 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 TBC1D9Q6ZT07 1266 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 DEPDC4Q8N2C3 294 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 TMEM151AQ8N4L1 468 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 AIDAQ96BJ3 306 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 ENAMQ9NRM1 1142 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 NSFL1CQ9UNZ2 370 aaKnown RBP6.63□□□□□ -1.35
CAPN3-212ENST00000564503 PHF24Q9UPV7 400 aa6.63□□□□□ -1.35
CAPN3-212ENST00000564503 KIF21AQ7Z4S6 1674 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 PCF11O94913 1555 aaKnown RBP6.62□□□□□ -1.35
CAPN3-212ENST00000564503 SETD5Q9C0A6 1442 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 RAB3GAP2Q9H2M9 1393 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 USP17L5A8MUK1 530 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 RNF225M0QZC1 329 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-212ENST00000564503 GDF11O95390 407 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 NEFLP07196 543 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 MTFR1Q15390 333 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 KANK4Q5T7N3 995 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-212ENST00000564503 ZNF295-AS1Q8N0V1 137 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 BCL11AQ9H165 835 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 CRISPLD1Q9H336 500 aa6.62□□□□□ -1.35
CAPN3-212ENST00000564503 IQSEC3Q9UPP2 1182 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-212ENST00000564503 BACH1O14867 736 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 IRS1P35568 1242 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 MAP2K3P46734 347 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
CAPN3-212ENST00000564503 SCARF2Q96GP6 870 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-212ENST00000564503 NDFIP2Q9NV92 336 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 PODXL2Q9NZ53 605 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 USP3Q9Y6I4 520 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 LRRIQ1Q96JM4 1722 aa6.61□□□□□ -1.35
CAPN3-212ENST00000564503 LRRC9Q6ZRR7 1453 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 CCER2I3L3R5 266 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 BNIP3LO60238 219 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 ATP4AP20648 1035 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 PSME1Q06323 249 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 C1orf216Q8TAB5 229 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 CLUAP1Q96AJ1 413 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 KLRG1Q96E93 195 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 ABHD17AQ96GS6 310 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 OXCT2Q9BYC2 517 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-212ENST00000564503 ZCCHC2Q9C0B9 1178 aaKnown RBP6.6□□□□□ -1.35
CAPN3-212ENST00000564503 ZNF358Q9NW07 568 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 CABP1Q9NZU7 370 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 ATXN7L1Q9ULK2 861 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-212ENST00000564503 GCC2Q8IWJ2 1684 aa6.6□□□□□ -1.35
CAPN3-212ENST00000564503 ZBTB7BO15156 539 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-212ENST00000564503 PLEKHM2Q8IWE5 1019 aa6.59□□□□□ -1.35
CAPN3-212ENST00000564503 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
CAPN3-212ENST00000564503 UCN2Q96RP3 112 aa6.59□□□□□ -1.35
CAPN3-212ENST00000564503 LRRC4BQ9NT99 713 aa6.59□□□□□ -1.35
CAPN3-212ENST00000564503 DNAAF2Q9NVR5 837 aaKnown RBP6.59□□□□□ -1.35
CAPN3-212ENST00000564503 SCHIP1Q9P0W5 487 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-212ENST00000564503 CC2D2AQ9P2K1 1620 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 CNTNAP5Q8WYK1 1306 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 A0A1W2PNR3 127 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 USP17L3A6NCW0 530 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 USP17L4A6NCW7 530 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 C2CD2LO14523 706 aa6.58□□□□□ -1.36
CAPN3-212ENST00000564503 OIP5O43482 229 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms