RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 LRRC4BQ9NT99 713 aa15.45■□□□□ 0.06
NR4A1-220ENST00000564201 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
NR4A1-220ENST00000564201 SLC27A3Q5K4L6 730 aa15.44■□□□□ 0.06
NR4A1-220ENST00000564201 TRMT2AQ8IZ69 625 aaKnown RBP15.44■□□□□ 0.06
NR4A1-220ENST00000564201 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
NR4A1-220ENST00000564201 USP16Q9Y5T5 823 aa15.44■□□□□ 0.06
NR4A1-220ENST00000564201 TWISTNBQ3B726 338 aaPredicted RBP15.43■□□□□ 0.06
NR4A1-220ENST00000564201 VSIG10Q8N0Z9 540 aa15.43■□□□□ 0.06
NR4A1-220ENST00000564201 C5P01031 1676 aa15.43■□□□□ 0.06
NR4A1-220ENST00000564201 LINC00116Q8NCU8 138 aa15.42■□□□□ 0.06
NR4A1-220ENST00000564201 TEX13AQ9BXU3 409 aaPredicted RBP15.42■□□□□ 0.06
NR4A1-220ENST00000564201 TJP1Q07157 1748 aa15.42■□□□□ 0.06
NR4A1-220ENST00000564201 RGPD3A6NKT7 1758 aaPredicted RBP15.41■□□□□ 0.06
NR4A1-220ENST00000564201 RGPD4Q7Z3J3 1758 aa15.41■□□□□ 0.06
NR4A1-220ENST00000564201 STARD3NLO95772 234 aa15.41■□□□□ 0.06
NR4A1-220ENST00000564201 TCERG1O14776 1098 aaKnown RBP15.4■□□□□ 0.06
NR4A1-220ENST00000564201 CYP19A1P11511 503 aaPredicted RBP15.4■□□□□ 0.06
NR4A1-220ENST00000564201 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
NR4A1-220ENST00000564201 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
NR4A1-220ENST00000564201 TAF1LQ8IZX4 1826 aa15.4■□□□□ 0.06
NR4A1-220ENST00000564201 VAMP4O75379 141 aa15.39■□□□□ 0.05
NR4A1-220ENST00000564201 A1BGP04217 495 aa15.39■□□□□ 0.05
NR4A1-220ENST00000564201 HOXB7P09629 217 aa15.39■□□□□ 0.05
NR4A1-220ENST00000564201 CRKLP46109 303 aaKnown RBP15.39■□□□□ 0.05
NR4A1-220ENST00000564201 ZNF831Q5JPB2 1677 aa15.38■□□□□ 0.05
NR4A1-220ENST00000564201 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
NR4A1-220ENST00000564201 AK7Q96M32 723 aa15.38■□□□□ 0.05
NR4A1-220ENST00000564201 CCDC87Q9NVE4 849 aa15.38■□□□□ 0.05
NR4A1-220ENST00000564201 ZNF330Q9Y3S2 320 aaPredicted RBP15.38■□□□□ 0.05
NR4A1-220ENST00000564201 LAMB4A4D0S4 1761 aa15.38■□□□□ 0.05
NR4A1-220ENST00000564201 RREB1Q92766 1687 aa15.38■□□□□ 0.05
NR4A1-220ENST00000564201 COL5A3P25940 1745 aaPredicted RBP15.37■□□□□ 0.05
NR4A1-220ENST00000564201 CCDC30Q5VVM6 783 aa15.37■□□□□ 0.05
NR4A1-220ENST00000564201 INTS5Q6P9B9 1019 aaKnown RBP15.37■□□□□ 0.05
NR4A1-220ENST00000564201 ZBTB1Q9Y2K1 713 aa15.37■□□□□ 0.05
NR4A1-220ENST00000564201 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
NR4A1-220ENST00000564201 MYH14Q7Z406 1995 aaKnown RBP15.36■□□□□ 0.05
NR4A1-220ENST00000564201 CICQ96RK0 1608 aaPredicted RBP15.36■□□□□ 0.05
NR4A1-220ENST00000564201 GNPATO15228 680 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 ANXA1P04083 346 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 MYL6BP14649 208 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 ZNF827Q17R98 1081 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 SMIM5Q71RC9 77 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 CHPF2Q9P2E5 772 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 NUP188Q5SRE5 1749 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 SOS1Q07889 1333 aaPredicted RBP15.36■□□□□ 0.05
NR4A1-220ENST00000564201 CNTNAP4Q9C0A0 1308 aa15.36■□□□□ 0.05
NR4A1-220ENST00000564201 NBPF26B4DH59 902 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 PHF14O94880 888 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 HMGB2P26583 209 aaKnown RBP15.35■□□□□ 0.05
NR4A1-220ENST00000564201 PROSER3Q2NL68 480 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 RC3H1Q5TC82 1133 aaKnown RBP15.35■□□□□ 0.05
NR4A1-220ENST00000564201 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 NBPF10Q6P3W6 841 aaKnown RBP15.35■□□□□ 0.05
NR4A1-220ENST00000564201 NBPF15Q8N660 670 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 STK31Q9BXU1 1019 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
NR4A1-220ENST00000564201 STK32BQ9NY57 414 aa15.35■□□□□ 0.05
NR4A1-220ENST00000564201 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
NR4A1-220ENST00000564201 ARXQ96QS3 562 aa15.34■□□□□ 0.05
NR4A1-220ENST00000564201 BCL2L13Q9BXK5 485 aa15.34■□□□□ 0.05
NR4A1-220ENST00000564201 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
NR4A1-220ENST00000564201 TFCP2L1Q9NZI6 479 aa15.34■□□□□ 0.05
NR4A1-220ENST00000564201 RPS6KA4O75676 772 aa15.33■□□□□ 0.04
NR4A1-220ENST00000564201 CT47B1P0C2W7 299 aaPredicted RBP15.33■□□□□ 0.04
NR4A1-220ENST00000564201 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
NR4A1-220ENST00000564201 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.04
NR4A1-220ENST00000564201 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
NR4A1-220ENST00000564201 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
NR4A1-220ENST00000564201 PDIA6Q15084 440 aa15.32■□□□□ 0.04
NR4A1-220ENST00000564201 SLC15A2Q16348 729 aa15.32■□□□□ 0.04
NR4A1-220ENST00000564201 AMIGO3Q86WK7 504 aa15.32■□□□□ 0.04
NR4A1-220ENST00000564201 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
NR4A1-220ENST00000564201 DDX21Q9NR30 783 aaKnown RBP eCLIP15.32■□□□□ 0.04
NR4A1-220ENST00000564201 ERBB4Q15303 1308 aa15.32■□□□□ 0.04
NR4A1-220ENST00000564201 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
NR4A1-220ENST00000564201 AIMP1Q12904 312 aaKnown RBP15.31■□□□□ 0.04
NR4A1-220ENST00000564201 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
NR4A1-220ENST00000564201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.3■□□□□ 0.04
NR4A1-220ENST00000564201 RARSP54136 660 aaKnown RBP15.3■□□□□ 0.04
NR4A1-220ENST00000564201 EIF5P55010 431 aaKnown RBP15.3■□□□□ 0.04
NR4A1-220ENST00000564201 TRAPPC3LQ5T215 181 aa15.3■□□□□ 0.04
NR4A1-220ENST00000564201 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
NR4A1-220ENST00000564201 XAGE3Q8WTP9 111 aa15.3■□□□□ 0.04
NR4A1-220ENST00000564201 ZNF428Q96B54 188 aa15.3■□□□□ 0.04
NR4A1-220ENST00000564201 PHAXQ9H814 394 aaKnown RBP15.3■□□□□ 0.04
NR4A1-220ENST00000564201 HYPKQ9NX55 129 aa15.3■□□□□ 0.04
NR4A1-220ENST00000564201 COL15A1P39059 1388 aa15.29■□□□□ 0.04
NR4A1-220ENST00000564201 ALDH1L2Q3SY69 923 aa15.29■□□□□ 0.04
NR4A1-220ENST00000564201 COPS6Q7L5N1 327 aa15.29■□□□□ 0.04
NR4A1-220ENST00000564201 G2E3Q7L622 706 aa15.29■□□□□ 0.04
NR4A1-220ENST00000564201 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
NR4A1-220ENST00000564201 ARHGEF1Q92888 912 aaKnown RBP15.29■□□□□ 0.04
NR4A1-220ENST00000564201 RCAN3Q9UKA8 241 aa15.29■□□□□ 0.04
NR4A1-220ENST00000564201 TBC1D2BQ9UPU7 963 aa15.29■□□□□ 0.04
NR4A1-220ENST00000564201 TUBGCP6Q96RT7 1819 aa15.29■□□□□ 0.04
NR4A1-220ENST00000564201 BCAR3O75815 825 aa15.28■□□□□ 0.04
NR4A1-220ENST00000564201 SSFA2P28290 1259 aa15.28■□□□□ 0.04
NR4A1-220ENST00000564201 RFC4P35249 363 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms