RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 LAMB4A4D0S4 1761 aa26.18■■□□□ 1.78
CMTM3-207ENST00000564060 ZBTB1Q9Y2K1 713 aa26.18■■□□□ 1.78
CMTM3-207ENST00000564060 COL15A1P39059 1388 aa26.18■■□□□ 1.78
CMTM3-207ENST00000564060 KIF13BQ9NQT8 1826 aa26.17■■□□□ 1.78
CMTM3-207ENST00000564060 GYS1P13807 737 aa26.17■■□□□ 1.78
CMTM3-207ENST00000564060 ZPR1O75312 459 aa26.16■■□□□ 1.78
CMTM3-207ENST00000564060 MMP10P09238 476 aa26.16■■□□□ 1.78
CMTM3-207ENST00000564060 RIPK4P57078 832 aa26.15■■□□□ 1.78
CMTM3-207ENST00000564060 RUNDC1Q96C34 613 aa26.15■■□□□ 1.78
CMTM3-207ENST00000564060 CHD4Q14839 1912 aa26.15■■□□□ 1.78
CMTM3-207ENST00000564060 KCNQ3O43525 872 aa26.14■■□□□ 1.78
CMTM3-207ENST00000564060 SNRPA1P09661 255 aaKnown RBP26.14■■□□□ 1.78
CMTM3-207ENST00000564060 TMPOP42166 694 aaKnown RBP26.14■■□□□ 1.78
CMTM3-207ENST00000564060 NPM2Q86SE8 214 aaKnown RBP26.14■■□□□ 1.78
CMTM3-207ENST00000564060 A0A087WZG4 1122 aa26.13■■□□□ 1.77
CMTM3-207ENST00000564060 CANXP27824 592 aaKnown RBP26.13■■□□□ 1.77
CMTM3-207ENST00000564060 ANP32CO43423 234 aa26.12■■□□□ 1.77
CMTM3-207ENST00000564060 CCDC146Q8IYE0 955 aa26.12■■□□□ 1.77
CMTM3-207ENST00000564060 SRP68Q9UHB9 627 aaKnown RBP26.12■■□□□ 1.77
CMTM3-207ENST00000564060 NARFQ9UHQ1 456 aa26.12■■□□□ 1.77
CMTM3-207ENST00000564060 ADAMTS8Q9UP79 889 aa26.12■■□□□ 1.77
CMTM3-207ENST00000564060 PARP3Q9Y6F1 533 aa26.12■■□□□ 1.77
CMTM3-207ENST00000564060 SCN7AQ01118 1682 aa26.12■■□□□ 1.77
CMTM3-207ENST00000564060 NLGN2Q8NFZ4 835 aa26.11■■□□□ 1.77
CMTM3-207ENST00000564060 IL6STP40189 918 aaPredicted RBP26.1■■□□□ 1.77
CMTM3-207ENST00000564060 EIF5P55010 431 aaKnown RBP26.1■■□□□ 1.77
CMTM3-207ENST00000564060 GPR162Q16538 588 aa26.09■■□□□ 1.77
CMTM3-207ENST00000564060 THUMPD2Q9BTF0 503 aaKnown RBP26.09■■□□□ 1.77
CMTM3-207ENST00000564060 USPL1Q5W0Q7 1092 aa26.08■■□□□ 1.77
CMTM3-207ENST00000564060 BCORQ6W2J9 1755 aa26.07■■□□□ 1.76
CMTM3-207ENST00000564060 FKBP8Q14318 412 aa26.07■■□□□ 1.76
CMTM3-207ENST00000564060 BABAM1Q9NWV8 329 aa26.07■■□□□ 1.76
CMTM3-207ENST00000564060 MIS18AQ9NYP9 233 aa26.07■■□□□ 1.76
CMTM3-207ENST00000564060 C10orf71Q711Q0 1435 aa26.06■■□□□ 1.76
CMTM3-207ENST00000564060 USP16Q9Y5T5 823 aa26.06■■□□□ 1.76
CMTM3-207ENST00000564060 AFDNP55196 1824 aaKnown RBP26.06■■□□□ 1.76
CMTM3-207ENST00000564060 A1BGP04217 495 aa26.05■■□□□ 1.76
CMTM3-207ENST00000564060 NEUROD2Q15784 382 aa26.05■■□□□ 1.76
CMTM3-207ENST00000564060 PELP1Q8IZL8 1130 aaKnown RBP26.05■■□□□ 1.76
CMTM3-207ENST00000564060 ZNF330Q9Y3S2 320 aaPredicted RBP26.05■■□□□ 1.76
CMTM3-207ENST00000564060 TSPYL4Q9UJ04 414 aa26.04■■□□□ 1.76
CMTM3-207ENST00000564060 RRP7AQ9Y3A4 280 aaKnown RBP26.04■■□□□ 1.76
CMTM3-207ENST00000564060 N4BP2Q86UW6 1770 aaPredicted RBP26.04■■□□□ 1.76
CMTM3-207ENST00000564060 KIAA1551Q9HCM1 1747 aa26.03■■□□□ 1.76
CMTM3-207ENST00000564060 EIF4A1P60842 406 aaKnown RBP26.03■■□□□ 1.76
CMTM3-207ENST00000564060 NRXN2Q9P2S2 1712 aa26.02■■□□□ 1.76
CMTM3-207ENST00000564060 PRAMEF22A3QJZ6 481 aa26.02■■□□□ 1.76
CMTM3-207ENST00000564060 TGFB2P61812 414 aa26.02■■□□□ 1.76
CMTM3-207ENST00000564060 TM4SF1P30408 202 aa26.01■■□□□ 1.75
CMTM3-207ENST00000564060 GRIN3BO60391 1043 aa26■■□□□ 1.75
CMTM3-207ENST00000564060 GIGYF1O75420 1035 aaPredicted RBP26■■□□□ 1.75
CMTM3-207ENST00000564060 BRCA1P38398 1863 aaKnown RBP26■■□□□ 1.75
CMTM3-207ENST00000564060 POLRMTO00411 1230 aaKnown RBP25.99■■□□□ 1.75
CMTM3-207ENST00000564060 YY1P25490 414 aa25.99■■□□□ 1.75
CMTM3-207ENST00000564060 DDR1Q08345 913 aa25.99■■□□□ 1.75
CMTM3-207ENST00000564060 BCL2L12Q9HB09 334 aa25.99■■□□□ 1.75
CMTM3-207ENST00000564060 PXDNLA1KZ92 1463 aa25.98■■□□□ 1.75
CMTM3-207ENST00000564060 NFIXQ14938 502 aa25.98■■□□□ 1.75
CMTM3-207ENST00000564060 DZIP3Q86Y13 1208 aaKnown RBP25.98■■□□□ 1.75
CMTM3-207ENST00000564060 TRIM35Q9UPQ4 493 aa25.98■■□□□ 1.75
CMTM3-207ENST00000564060 TBC1D2BQ9UPU7 963 aa25.98■■□□□ 1.75
CMTM3-207ENST00000564060 MRS2Q9HD23 443 aa25.97■■□□□ 1.75
CMTM3-207ENST00000564060 ZNF652Q9Y2D9 606 aa25.96■■□□□ 1.75
CMTM3-207ENST00000564060 APAF1O14727 1248 aa25.95■■□□□ 1.74
CMTM3-207ENST00000564060 CALD1Q05682 793 aaKnown RBP25.95■■□□□ 1.74
CMTM3-207ENST00000564060 ERBB4Q15303 1308 aa25.94■■□□□ 1.74
CMTM3-207ENST00000564060 RGL2O15211 777 aa25.94■■□□□ 1.74
CMTM3-207ENST00000564060 CAMTA2O94983 1202 aa25.94■■□□□ 1.74
CMTM3-207ENST00000564060 YBX3P16989 372 aaKnown RBP eCLIP25.94■■□□□ 1.741e-6■■□□□ 12.5
CMTM3-207ENST00000564060 PIP4K2AP48426 406 aaPredicted RBP25.94■■□□□ 1.74
CMTM3-207ENST00000564060 CCDC184Q52MB2 194 aa25.94■■□□□ 1.74
CMTM3-207ENST00000564060 CARMIL3Q8ND23 1372 aa25.94■■□□□ 1.74
CMTM3-207ENST00000564060 NBPF26B4DH59 902 aa25.93■■□□□ 1.74
CMTM3-207ENST00000564060 NBPF10Q6P3W6 841 aaKnown RBP25.93■■□□□ 1.74
CMTM3-207ENST00000564060 NBPF15Q8N660 670 aa25.93■■□□□ 1.74
CMTM3-207ENST00000564060 ARFGEF1Q9Y6D6 1849 aa25.93■■□□□ 1.74
CMTM3-207ENST00000564060 CHL1O00533 1208 aa25.92■■□□□ 1.74
CMTM3-207ENST00000564060 SERPINB2P05120 415 aa25.92■■□□□ 1.74
CMTM3-207ENST00000564060 CLEC4GQ6UXB4 293 aa25.92■■□□□ 1.74
CMTM3-207ENST00000564060 LAS1LQ9Y4W2 734 aaKnown RBP25.92■■□□□ 1.74
CMTM3-207ENST00000564060 DLEC1Q9Y238 1755 aa25.92■■□□□ 1.74
CMTM3-207ENST00000564060 NUP98P52948 1817 aa25.91■■□□□ 1.74
CMTM3-207ENST00000564060 TBC1D9BQ66K14 1250 aa25.91■■□□□ 1.74
CMTM3-207ENST00000564060 BICDL1Q6ZP65 573 aa25.91■■□□□ 1.74
CMTM3-207ENST00000564060 UTRNP46939 3433 aa25.9■■□□□ 1.74
CMTM3-207ENST00000564060 CFAP44Q96MT7 982 aa25.9■■□□□ 1.74
CMTM3-207ENST00000564060 SETDB2Q96T68 719 aa25.9■■□□□ 1.74
CMTM3-207ENST00000564060 GOLGB1Q14789 3259 aaKnown RBP25.89■■□□□ 1.73
CMTM3-207ENST00000564060 A0A0G2JLW4 131 aa25.88■■□□□ 1.73
CMTM3-207ENST00000564060 DPEP1P16444 411 aa25.88■■□□□ 1.73
CMTM3-207ENST00000564060 ANKRD31Q8N7Z5 1873 aa25.87■■□□□ 1.73
CMTM3-207ENST00000564060 NPHP1O15259 732 aa25.86■■□□□ 1.73
CMTM3-207ENST00000564060 KIF6Q6ZMV9 814 aa25.86■■□□□ 1.73
CMTM3-207ENST00000564060 IFT57Q9NWB7 429 aa25.86■■□□□ 1.73
CMTM3-207ENST00000564060 PIM2Q9P1W9 311 aa25.86■■□□□ 1.73
CMTM3-207ENST00000564060 HOXB7P09629 217 aa25.85■■□□□ 1.73
CMTM3-207ENST00000564060 MYL6BP14649 208 aa25.85■■□□□ 1.73
CMTM3-207ENST00000564060 EIF2S2P20042 333 aaKnown RBP25.85■■□□□ 1.73
CMTM3-207ENST00000564060 GNAI1P63096 354 aa25.85■■□□□ 1.73
CMTM3-207ENST00000564060 WWC3Q9ULE0 1092 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms