RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 USP17L13C9JLJ4 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L12C9JPN9 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L11C9JVI0 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L21D6R901 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L18D6R9N7 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L22D6RA61 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L17D6RBQ6 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L19D6RCP7 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L20D6RJB6 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 USP17L24Q0WX57 530 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 CRTC2Q53ET0 693 aaPredicted RBP7.74□□□□□ -1.17
GDE1-202ENST00000563645 EFHC2Q5JST6 749 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 VRTNQ9H8Y1 702 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 ZDHHC3Q9NYG2 299 aa7.74□□□□□ -1.17
GDE1-202ENST00000563645 SEC13P55735 322 aa7.73□□□□□ -1.17
GDE1-202ENST00000563645 PTK7Q13308 1070 aa7.73□□□□□ -1.17
GDE1-202ENST00000563645 TEAD4Q15561 434 aa7.73□□□□□ -1.17
GDE1-202ENST00000563645 TSEN2Q8NCE0 465 aaKnown RBP7.73□□□□□ -1.17
GDE1-202ENST00000563645 ZDHHC1Q8WTX9 485 aa7.73□□□□□ -1.17
GDE1-202ENST00000563645 AIDAQ96BJ3 306 aa7.73□□□□□ -1.17
GDE1-202ENST00000563645 MBIPQ9NS73 344 aa7.73□□□□□ -1.17
GDE1-202ENST00000563645 FAM181BA6NEQ2 426 aa7.72□□□□□ -1.17
GDE1-202ENST00000563645 SLURP2P0DP57 97 aa7.72□□□□□ -1.17
GDE1-202ENST00000563645 TATP17735 454 aaPredicted RBP7.72□□□□□ -1.17
GDE1-202ENST00000563645 UBAP2LQ14157 1087 aaKnown RBP7.72□□□□□ -1.17
GDE1-202ENST00000563645 TBCELQ5QJ74 424 aa7.72□□□□□ -1.17
GDE1-202ENST00000563645 TSPAN10Q9H1Z9 355 aaPredicted RBP7.72□□□□□ -1.17
GDE1-202ENST00000563645 PARP3Q9Y6F1 533 aa7.72□□□□□ -1.17
GDE1-202ENST00000563645 PSMA6P60900 246 aaKnown RBP7.71□□□□□ -1.18
GDE1-202ENST00000563645 SRSF11Q05519 484 aaKnown RBP7.71□□□□□ -1.18
GDE1-202ENST00000563645 DPYDQ12882 1025 aa7.71□□□□□ -1.18
GDE1-202ENST00000563645 ANKMY2Q8IV38 441 aa7.71□□□□□ -1.18
GDE1-202ENST00000563645 CFHR5Q9BXR6 569 aa7.71□□□□□ -1.18
GDE1-202ENST00000563645 SERTM1A2A2V5 107 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 ADAMTS2O95450 1211 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 NOS2P35228 1153 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 TXLNAP40222 546 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 NLRP8Q86W28 1048 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 ZNF232Q9UNY5 417 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 PHF24Q9UPV7 400 aa7.7□□□□□ -1.18
GDE1-202ENST00000563645 EML1O00423 815 aa7.69□□□□□ -1.18
GDE1-202ENST00000563645 HIRAP54198 1017 aaPredicted RBP7.69□□□□□ -1.18
GDE1-202ENST00000563645 ARSJQ5FYB0 599 aaPredicted RBP7.69□□□□□ -1.18
GDE1-202ENST00000563645 FIGNL1Q6PIW4 674 aa7.69□□□□□ -1.18
GDE1-202ENST00000563645 POTEAQ6S8J7 498 aa7.69□□□□□ -1.18
GDE1-202ENST00000563645 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
GDE1-202ENST00000563645 CHMP3Q9Y3E7 222 aa7.69□□□□□ -1.18
GDE1-202ENST00000563645 IGF1RP08069 1367 aa7.69□□□□□ -1.18
GDE1-202ENST00000563645 A0A1W2PNR3 127 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 MX2P20592 715 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 RFX1P22670 979 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 SH3PXD2AQ5TCZ1 1133 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 ZNF385CQ66K41 422 aaPredicted RBP7.68□□□□□ -1.18
GDE1-202ENST00000563645 C14orf37Q86TY3 774 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
GDE1-202ENST00000563645 ARXQ96QS3 562 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 ZIC5Q96T25 663 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 NDFIP2Q9NV92 336 aa7.68□□□□□ -1.18
GDE1-202ENST00000563645 C21orf2O43822 256 aa7.67□□□□□ -1.18
GDE1-202ENST00000563645 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
GDE1-202ENST00000563645 BICDL1Q6ZP65 573 aa7.67□□□□□ -1.18
GDE1-202ENST00000563645 SVOPQ8N4V2 548 aa7.67□□□□□ -1.18
GDE1-202ENST00000563645 ABHD17AQ96GS6 310 aa7.67□□□□□ -1.18
GDE1-202ENST00000563645 ZCCHC2Q9C0B9 1178 aaKnown RBP7.67□□□□□ -1.18
GDE1-202ENST00000563645 NSFL1CQ9UNZ2 370 aaKnown RBP7.67□□□□□ -1.18
GDE1-202ENST00000563645 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
GDE1-202ENST00000563645 GPC6Q9Y625 555 aaPredicted RBP7.67□□□□□ -1.18
GDE1-202ENST00000563645 ARID3CA6NKF2 412 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 BNIP3LO60238 219 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 CDCA8Q53HL2 280 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 STAG2Q8N3U4 1231 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 GAS2L2Q8NHY3 880 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 WHAMMQ8TF30 809 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 SERPINA10Q9UK55 444 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 GJA3Q9Y6H8 435 aa7.66□□□□□ -1.18
GDE1-202ENST00000563645 ATXN7O15265 892 aaPredicted RBP7.65□□□□□ -1.18
GDE1-202ENST00000563645 FGFR3P22607 806 aa7.65□□□□□ -1.18
GDE1-202ENST00000563645 MAP2K3P46734 347 aa7.65□□□□□ -1.18
GDE1-202ENST00000563645 SAMD5Q5TGI4 173 aa7.65□□□□□ -1.18
GDE1-202ENST00000563645 C1orf53Q5VUE5 145 aa7.65□□□□□ -1.18
GDE1-202ENST00000563645 ATAD2Q6PL18 1390 aa7.65□□□□□ -1.18
GDE1-202ENST00000563645 RHPN1Q8TCX5 695 aa7.65□□□□□ -1.18
GDE1-202ENST00000563645 SCG3Q8WXD2 468 aaKnown RBP7.65□□□□□ -1.18
GDE1-202ENST00000563645 HINFPQ9BQA5 517 aa7.65□□□□□ -1.18
GDE1-202ENST00000563645 NOVA2Q9UNW9 492 aaKnown RBP7.65□□□□□ -1.18
GDE1-202ENST00000563645 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.64□□□□□ -1.19
GDE1-202ENST00000563645 FAM157BP0CG42 384 aa7.64□□□□□ -1.19
GDE1-202ENST00000563645 IGFBP4P22692 258 aa7.64□□□□□ -1.19
GDE1-202ENST00000563645 LYPD4Q6UWN0 246 aa7.64□□□□□ -1.19
GDE1-202ENST00000563645 FAM200AQ8TCP9 573 aa7.64□□□□□ -1.19
GDE1-202ENST00000563645 C2orf49Q9BVC5 232 aaPredicted RBP7.64□□□□□ -1.19
GDE1-202ENST00000563645 PHACTR1Q9C0D0 580 aa7.64□□□□□ -1.19
GDE1-202ENST00000563645 DCDC2BA2VCK2 349 aa7.63□□□□□ -1.19
GDE1-202ENST00000563645 CELA2BP08218 269 aaPredicted RBP7.63□□□□□ -1.19
GDE1-202ENST00000563645 SRPK2P78362 688 aaKnown RBP7.63□□□□□ -1.19
GDE1-202ENST00000563645 MAP3K10Q02779 954 aa7.63□□□□□ -1.19
GDE1-202ENST00000563645 ELOAQ14241 798 aaKnown RBP7.63□□□□□ -1.19
GDE1-202ENST00000563645 C7orf43Q8WVR3 580 aa7.63□□□□□ -1.19
GDE1-202ENST00000563645 HCN4Q9Y3Q4 1203 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms