RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
LPCAT4-204ENST00000563240 NEFMP07197 916 aa20.28■□□□□ 0.84
LPCAT4-204ENST00000563240 DPEP1P16444 411 aa20.28■□□□□ 0.84
LPCAT4-204ENST00000563240 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
LPCAT4-204ENST00000563240 COL15A1P39059 1388 aa20.28■□□□□ 0.84
LPCAT4-204ENST00000563240 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
LPCAT4-204ENST00000563240 CHD4Q14839 1912 aa20.27■□□□□ 0.84
LPCAT4-204ENST00000563240 TGFB2P61812 414 aa20.27■□□□□ 0.84
LPCAT4-204ENST00000563240 BCS1LQ9Y276 419 aa20.27■□□□□ 0.84
LPCAT4-204ENST00000563240 PXDNLA1KZ92 1463 aa20.26■□□□□ 0.83
LPCAT4-204ENST00000563240 TM4SF1P30408 202 aa20.26■□□□□ 0.83
LPCAT4-204ENST00000563240 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
LPCAT4-204ENST00000563240 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
LPCAT4-204ENST00000563240 A1BGP04217 495 aa20.25■□□□□ 0.83
LPCAT4-204ENST00000563240 BICDL1Q6ZP65 573 aa20.25■□□□□ 0.83
LPCAT4-204ENST00000563240 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
LPCAT4-204ENST00000563240 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
LPCAT4-204ENST00000563240 POLRMTO00411 1230 aaKnown RBP20.24■□□□□ 0.83
LPCAT4-204ENST00000563240 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
LPCAT4-204ENST00000563240 NFIXQ14938 502 aa20.24■□□□□ 0.83
LPCAT4-204ENST00000563240 RALBP1Q15311 655 aa20.24■□□□□ 0.83
LPCAT4-204ENST00000563240 BCL2L12Q9HB09 334 aa20.24■□□□□ 0.83
LPCAT4-204ENST00000563240 TBC1D2BQ9UPU7 963 aa20.24■□□□□ 0.83
LPCAT4-204ENST00000563240 GOLGB1Q14789 3259 aaKnown RBP20.23■□□□□ 0.83
LPCAT4-204ENST00000563240 HTATSF1O43719 755 aaKnown RBP20.23■□□□□ 0.83
LPCAT4-204ENST00000563240 PIP4K2AP48426 406 aaPredicted RBP20.23■□□□□ 0.83
LPCAT4-204ENST00000563240 USP16Q9Y5T5 823 aa20.23■□□□□ 0.83
LPCAT4-204ENST00000563240 UBR2Q8IWV8 1755 aa20.22■□□□□ 0.83
LPCAT4-204ENST00000563240 PLEKHF1Q96S99 279 aa20.22■□□□□ 0.83
LPCAT4-204ENST00000563240 A0A087WZG4 1122 aa20.21■□□□□ 0.83
LPCAT4-204ENST00000563240 KCNA3P22001 575 aa20.21■□□□□ 0.83
LPCAT4-204ENST00000563240 CHRNA5P30532 468 aa20.21■□□□□ 0.83
LPCAT4-204ENST00000563240 TAF7Q15545 349 aaPredicted RBP20.21■□□□□ 0.83
LPCAT4-204ENST00000563240 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
LPCAT4-204ENST00000563240 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
LPCAT4-204ENST00000563240 MAPK8IP3Q9UPT6 1336 aa20.21■□□□□ 0.83
LPCAT4-204ENST00000563240 SERPINB2P05120 415 aa20.2■□□□□ 0.82
LPCAT4-204ENST00000563240 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
LPCAT4-204ENST00000563240 SIPA1L3O60292 1781 aaPredicted RBP20.2■□□□□ 0.82
LPCAT4-204ENST00000563240 N4BP2Q86UW6 1770 aaPredicted RBP20.19■□□□□ 0.82
LPCAT4-204ENST00000563240 SNRPA1P09661 255 aaKnown RBP20.19■□□□□ 0.82
LPCAT4-204ENST00000563240 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
LPCAT4-204ENST00000563240 NFE2L2Q16236 605 aa20.19■□□□□ 0.82
LPCAT4-204ENST00000563240 ZNF526Q8TF50 670 aaPredicted RBP20.19■□□□□ 0.82
LPCAT4-204ENST00000563240 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
LPCAT4-204ENST00000563240 PIM2Q9P1W9 311 aa20.19■□□□□ 0.82
LPCAT4-204ENST00000563240 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
LPCAT4-204ENST00000563240 ATP10DQ9P241 1426 aa20.17■□□□□ 0.82
LPCAT4-204ENST00000563240 DALRD3Q5D0E6 543 aaKnown RBP20.16■□□□□ 0.82
LPCAT4-204ENST00000563240 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
LPCAT4-204ENST00000563240 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
LPCAT4-204ENST00000563240 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
LPCAT4-204ENST00000563240 DZIP3Q86Y13 1208 aaKnown RBP20.15■□□□□ 0.82
LPCAT4-204ENST00000563240 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
LPCAT4-204ENST00000563240 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
LPCAT4-204ENST00000563240 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.81
LPCAT4-204ENST00000563240 CAMTA2O94983 1202 aa20.13■□□□□ 0.81
LPCAT4-204ENST00000563240 RIPK4P57078 832 aa20.13■□□□□ 0.81
LPCAT4-204ENST00000563240 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
LPCAT4-204ENST00000563240 GPBP1L1Q9HC44 474 aaPredicted RBP20.13■□□□□ 0.81
LPCAT4-204ENST00000563240 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
LPCAT4-204ENST00000563240 C1QTNF8P60827 252 aa20.12■□□□□ 0.81
LPCAT4-204ENST00000563240 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
LPCAT4-204ENST00000563240 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
LPCAT4-204ENST00000563240 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
LPCAT4-204ENST00000563240 NPHP1O15259 732 aa20.11■□□□□ 0.81
LPCAT4-204ENST00000563240 NEUROD2Q15784 382 aa20.11■□□□□ 0.81
LPCAT4-204ENST00000563240 C2CD5Q86YS7 1000 aa20.11■□□□□ 0.81
LPCAT4-204ENST00000563240 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
LPCAT4-204ENST00000563240 SETDB2Q96T68 719 aa20.11■□□□□ 0.81
LPCAT4-204ENST00000563240 CARMIL3Q8ND23 1372 aa20.1■□□□□ 0.81
LPCAT4-204ENST00000563240 ADCY9O60503 1353 aa20.09■□□□□ 0.81
LPCAT4-204ENST00000563240 H0YIN7 160 aa20.09■□□□□ 0.81
LPCAT4-204ENST00000563240 EIF4A1P60842 406 aaKnown RBP20.09■□□□□ 0.81
LPCAT4-204ENST00000563240 WDR43Q15061 677 aaKnown RBP eCLIP20.09■□□□□ 0.81
LPCAT4-204ENST00000563240 TMPOP42166 694 aaKnown RBP20.08■□□□□ 0.81
LPCAT4-204ENST00000563240 PRR5LQ6MZQ0 368 aa20.08■□□□□ 0.81
LPCAT4-204ENST00000563240 C9orf131Q5VYM1 1079 aa20.07■□□□□ 0.8
LPCAT4-204ENST00000563240 PRKRIP1Q9H875 184 aaPredicted RBP20.07■□□□□ 0.8
LPCAT4-204ENST00000563240 TSPYL4Q9UJ04 414 aa20.07■□□□□ 0.8
LPCAT4-204ENST00000563240 DLG5Q8TDM6 1919 aa20.07■□□□□ 0.8
LPCAT4-204ENST00000563240 AFDNP55196 1824 aaKnown RBP20.06■□□□□ 0.8
LPCAT4-204ENST00000563240 TTLL6Q8N841 843 aa20.06■□□□□ 0.8
LPCAT4-204ENST00000563240 CNBD1Q8NA66 436 aa20.06■□□□□ 0.8
LPCAT4-204ENST00000563240 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.8
LPCAT4-204ENST00000563240 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
LPCAT4-204ENST00000563240 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
LPCAT4-204ENST00000563240 FAM177BA6PVY3 158 aa20.05■□□□□ 0.8
LPCAT4-204ENST00000563240 BRIP1Q9BX63 1249 aa20.05■□□□□ 0.8
LPCAT4-204ENST00000563240 ZNF652Q9Y2D9 606 aa20.05■□□□□ 0.8
LPCAT4-204ENST00000563240 MYL6BP14649 208 aa20.04■□□□□ 0.8
LPCAT4-204ENST00000563240 PDE6BP35913 854 aa20.04■□□□□ 0.8
LPCAT4-204ENST00000563240 HLFQ16534 295 aa20.04■□□□□ 0.8
LPCAT4-204ENST00000563240 NBPF5PQ86XG9 351 aaPredicted RBP20.04■□□□□ 0.8
LPCAT4-204ENST00000563240 ZNF219Q9P2Y4 722 aaPredicted RBP20.04■□□□□ 0.8
LPCAT4-204ENST00000563240 SCN7AQ01118 1682 aa20.03■□□□□ 0.8
LPCAT4-204ENST00000563240 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
LPCAT4-204ENST00000563240 NRXN2Q9P2S2 1712 aa20.03■□□□□ 0.8
LPCAT4-204ENST00000563240 ST5P78524 1137 aa20.03■□□□□ 0.8
LPCAT4-204ENST00000563240 LMOD3Q0VAK6 560 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms