RNA–Protein interactions for RNA: ENST00000563185.6

NAE1-209, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-209ENST00000563185 USP42Q9H9J4 1324 aaKnown RBP28.35■■■□□ 2.13
NAE1-209ENST00000563185 CANXP27824 592 aaKnown RBP28.34■■■□□ 2.13
NAE1-209ENST00000563185 RIPK4P57078 832 aa28.34■■■□□ 2.13
NAE1-209ENST00000563185 PNISRQ8TF01 805 aaKnown RBP28.34■■■□□ 2.13
NAE1-209ENST00000563185 SRP68Q9UHB9 627 aaKnown RBP28.34■■■□□ 2.13
NAE1-209ENST00000563185 ADAMTS8Q9UP79 889 aa28.33■■■□□ 2.13
NAE1-209ENST00000563185 CCDC146Q8IYE0 955 aa28.32■■■□□ 2.12
NAE1-209ENST00000563185 RUNDC1Q96C34 613 aa28.32■■■□□ 2.12
NAE1-209ENST00000563185 SNRPA1P09661 255 aaKnown RBP28.31■■■□□ 2.12
NAE1-209ENST00000563185 TMPOP42166 694 aaKnown RBP28.31■■■□□ 2.12
NAE1-209ENST00000563185 LMOD3Q0VAK6 560 aa28.31■■■□□ 2.12
NAE1-209ENST00000563185 GPR162Q16538 588 aa28.31■■■□□ 2.12
NAE1-209ENST00000563185 THUMPD2Q9BTF0 503 aaKnown RBP28.31■■■□□ 2.12
NAE1-209ENST00000563185 MIS18AQ9NYP9 233 aa28.31■■■□□ 2.12
NAE1-209ENST00000563185 COL15A1P39059 1388 aa28.31■■■□□ 2.12
NAE1-209ENST00000563185 PARP3Q9Y6F1 533 aa28.3■■■□□ 2.12
NAE1-209ENST00000563185 GOLGB1Q14789 3259 aaKnown RBP28.3■■■□□ 2.12
NAE1-209ENST00000563185 A0A087WZG4 1122 aa28.29■■■□□ 2.12
NAE1-209ENST00000563185 FKBP8Q14318 412 aa28.29■■■□□ 2.12
NAE1-209ENST00000563185 USPL1Q5W0Q7 1092 aa28.29■■■□□ 2.12
NAE1-209ENST00000563185 NPM2Q86SE8 214 aaKnown RBP28.29■■■□□ 2.12
NAE1-209ENST00000563185 NARFQ9UHQ1 456 aa28.29■■■□□ 2.12
NAE1-209ENST00000563185 EIF5P55010 431 aaKnown RBP28.28■■■□□ 2.12
NAE1-209ENST00000563185 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
NAE1-209ENST00000563185 UTRNP46939 3433 aa28.28■■■□□ 2.12
NAE1-209ENST00000563185 C4AP0C0L4 1744 aa28.27■■■□□ 2.12
NAE1-209ENST00000563185 DLG5Q8TDM6 1919 aa28.26■■■□□ 2.11
NAE1-209ENST00000563185 A1BGP04217 495 aa28.26■■■□□ 2.11
NAE1-209ENST00000563185 IL6STP40189 918 aaPredicted RBP28.26■■■□□ 2.11
NAE1-209ENST00000563185 RRP7AQ9Y3A4 280 aaKnown RBP28.26■■■□□ 2.11
NAE1-209ENST00000563185 USP16Q9Y5T5 823 aa28.26■■■□□ 2.11
NAE1-209ENST00000563185 ANP32CO43423 234 aa28.25■■■□□ 2.11
NAE1-209ENST00000563185 NEUROD2Q15784 382 aa28.25■■■□□ 2.11
NAE1-209ENST00000563185 ZNF330Q9Y3S2 320 aaPredicted RBP28.25■■■□□ 2.11
NAE1-209ENST00000563185 PRAMEF22A3QJZ6 481 aa28.24■■■□□ 2.11
NAE1-209ENST00000563185 TM4SF1P30408 202 aa28.21■■■□□ 2.11
NAE1-209ENST00000563185 YY1P25490 414 aa28.2■■■□□ 2.1
NAE1-209ENST00000563185 EIF4A1P60842 406 aaKnown RBP28.2■■■□□ 2.1
NAE1-209ENST00000563185 DDR1Q08345 913 aa28.2■■■□□ 2.1
NAE1-209ENST00000563185 BABAM1Q9NWV8 329 aa28.2■■■□□ 2.1
NAE1-209ENST00000563185 TSPYL4Q9UJ04 414 aa28.2■■■□□ 2.1
NAE1-209ENST00000563185 GRIN3BO60391 1043 aa28.19■■■□□ 2.1
NAE1-209ENST00000563185 TGFB2P61812 414 aa28.19■■■□□ 2.1
NAE1-209ENST00000563185 TBC1D2BQ9UPU7 963 aa28.19■■■□□ 2.1
NAE1-209ENST00000563185 GIGYF1O75420 1035 aaPredicted RBP28.18■■■□□ 2.1
NAE1-209ENST00000563185 BCL2L12Q9HB09 334 aa28.18■■■□□ 2.1
NAE1-209ENST00000563185 C10orf71Q711Q0 1435 aa28.18■■■□□ 2.1
NAE1-209ENST00000563185 POLRMTO00411 1230 aaKnown RBP28.17■■■□□ 2.1
NAE1-209ENST00000563185 NFIXQ14938 502 aa28.17■■■□□ 2.1
NAE1-209ENST00000563185 YBX3P16989 372 aaKnown RBP eCLIP28.16■■■□□ 2.15e-10■□□□□ 11.1
NAE1-209ENST00000563185 PIP4K2AP48426 406 aaPredicted RBP28.16■■■□□ 2.1
NAE1-209ENST00000563185 TRIM35Q9UPQ4 493 aa28.16■■■□□ 2.1
NAE1-209ENST00000563185 DZIP3Q86Y13 1208 aaKnown RBP28.15■■■□□ 2.1
NAE1-209ENST00000563185 CCDC184Q52MB2 194 aa28.14■■■□□ 2.1
NAE1-209ENST00000563185 KDM3BQ7LBC6 1761 aa28.14■■■□□ 2.09
NAE1-209ENST00000563185 NBPF26B4DH59 902 aa28.12■■■□□ 2.09
NAE1-209ENST00000563185 APAF1O14727 1248 aa28.12■■■□□ 2.09
NAE1-209ENST00000563185 CAMTA2O94983 1202 aa28.12■■■□□ 2.09
NAE1-209ENST00000563185 NBPF10Q6P3W6 841 aaKnown RBP28.12■■■□□ 2.09
NAE1-209ENST00000563185 BICDL1Q6ZP65 573 aa28.12■■■□□ 2.09
NAE1-209ENST00000563185 NBPF15Q8N660 670 aa28.12■■■□□ 2.09
NAE1-209ENST00000563185 MRS2Q9HD23 443 aa28.12■■■□□ 2.09
NAE1-209ENST00000563185 PXDNLA1KZ92 1463 aa28.11■■■□□ 2.09
NAE1-209ENST00000563185 A0A0G2JLW4 131 aa28.11■■■□□ 2.09
NAE1-209ENST00000563185 SERPINB2P05120 415 aa28.11■■■□□ 2.09
NAE1-209ENST00000563185 TBC1D9BQ66K14 1250 aa28.1■■■□□ 2.09
NAE1-209ENST00000563185 WWC3Q9ULE0 1092 aa28.1■■■□□ 2.09
NAE1-209ENST00000563185 LAS1LQ9Y4W2 734 aaKnown RBP28.1■■■□□ 2.09
NAE1-209ENST00000563185 CHL1O00533 1208 aa28.09■■■□□ 2.09
NAE1-209ENST00000563185 DPEP1P16444 411 aa28.09■■■□□ 2.09
NAE1-209ENST00000563185 ZNF652Q9Y2D9 606 aa28.08■■■□□ 2.09
NAE1-209ENST00000563185 KIF13BQ9NQT8 1826 aa28.08■■■□□ 2.09
NAE1-209ENST00000563185 CLEC4GQ6UXB4 293 aa28.07■■■□□ 2.08
NAE1-209ENST00000563185 SETDB2Q96T68 719 aa28.07■■■□□ 2.08
NAE1-209ENST00000563185 CALD1Q05682 793 aaKnown RBP28.06■■■□□ 2.08
NAE1-209ENST00000563185 RGL2O15211 777 aa28.05■■■□□ 2.08
NAE1-209ENST00000563185 CARMIL3Q8ND23 1372 aa28.05■■■□□ 2.08
NAE1-209ENST00000563185 SCN7AQ01118 1682 aa28.04■■■□□ 2.08
NAE1-209ENST00000563185 ERBB4Q15303 1308 aa28.04■■■□□ 2.08
NAE1-209ENST00000563185 CFAP44Q96MT7 982 aa28.04■■■□□ 2.08
NAE1-209ENST00000563185 LAMB4A4D0S4 1761 aa28.04■■■□□ 2.08
NAE1-209ENST00000563185 EIF2S2P20042 333 aaKnown RBP28.03■■■□□ 2.08
NAE1-209ENST00000563185 NGEFQ8N5V2 710 aa28.03■■■□□ 2.08
NAE1-209ENST00000563185 BCS1LQ9Y276 419 aa28.03■■■□□ 2.08
NAE1-209ENST00000563185 MYL6BP14649 208 aa28.02■■■□□ 2.08
NAE1-209ENST00000563185 KCNA3P22001 575 aa28.02■■■□□ 2.08
NAE1-209ENST00000563185 PIM2Q9P1W9 311 aa28.02■■■□□ 2.08
NAE1-209ENST00000563185 NPHP1O15259 732 aa28.01■■■□□ 2.07
NAE1-209ENST00000563185 CHRNA5P30532 468 aa28■■■□□ 2.07
NAE1-209ENST00000563185 KIF6Q6ZMV9 814 aa28■■■□□ 2.07
NAE1-209ENST00000563185 IFT57Q9NWB7 429 aa27.99■■■□□ 2.07
NAE1-209ENST00000563185 N4BP2Q86UW6 1770 aaPredicted RBP27.99■■■□□ 2.07
NAE1-209ENST00000563185 CHD4Q14839 1912 aa27.98■■■□□ 2.07
NAE1-209ENST00000563185 KIAA1551Q9HCM1 1747 aa27.98■■■□□ 2.07
NAE1-209ENST00000563185 ERVV-1B6SEH8 477 aa27.98■■■□□ 2.07
NAE1-209ENST00000563185 GNAI1P63096 354 aa27.98■■■□□ 2.07
NAE1-209ENST00000563185 DALRD3Q5D0E6 543 aaKnown RBP27.98■■■□□ 2.07
NAE1-209ENST00000563185 PRR5LQ6MZQ0 368 aa27.98■■■□□ 2.07
NAE1-209ENST00000563185 CNBD1Q8NA66 436 aa27.98■■■□□ 2.07
NAE1-209ENST00000563185 BRIP1Q9BX63 1249 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms