RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 IFNL2Q8IZJ0 200 aa9.18□□□□□ -0.94
SCAPER-205ENST00000562948 ACSBG1Q96GR2 724 aa9.18□□□□□ -0.94
SCAPER-205ENST00000562948 NAP1L5Q96NT1 182 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 NOB1Q9ULX3 412 aaKnown RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 PCDH11YQ9BZA8 1340 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 CLUAP1Q96AJ1 413 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 ATG3Q9NT62 314 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 CASZ1Q86V15 1759 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 BTBD11A6QL63 1104 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 HSP90AA1P07900 732 aaKnown RBP9.17□□□□□ -0.94
SCAPER-205ENST00000562948 RRP9O43818 475 aaKnown RBP9.17□□□□□ -0.94
SCAPER-205ENST00000562948 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 NGEFQ8N5V2 710 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 CRBNQ96SW2 442 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 RREB1Q92766 1687 aa9.17□□□□□ -0.94
SCAPER-205ENST00000562948 GNAI1P63096 354 aa9.16□□□□□ -0.94
SCAPER-205ENST00000562948 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
SCAPER-205ENST00000562948 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
SCAPER-205ENST00000562948 PRIM1P49642 420 aaKnown RBP9.16□□□□□ -0.94
SCAPER-205ENST00000562948 NBPF14Q5TI25 921 aa9.16□□□□□ -0.94
SCAPER-205ENST00000562948 NBPF10Q6P3W6 841 aaKnown RBP9.16□□□□□ -0.94
SCAPER-205ENST00000562948 NBPF15Q8N660 670 aa9.16□□□□□ -0.94
SCAPER-205ENST00000562948 PNNQ9H307 717 aaKnown RBP9.16□□□□□ -0.94
SCAPER-205ENST00000562948 TNS1Q9HBL0 1735 aaKnown RBP9.16□□□□□ -0.94
SCAPER-205ENST00000562948 COL4A1P02462 1669 aa9.16□□□□□ -0.94
SCAPER-205ENST00000562948 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.94
SCAPER-205ENST00000562948 SPG7Q9UQ90 795 aa9.15□□□□□ -0.94
SCAPER-205ENST00000562948 CICQ96RK0 1608 aaPredicted RBP9.15□□□□□ -0.94
SCAPER-205ENST00000562948 F6X3S4 739 aa9.15□□□□□ -0.94
SCAPER-205ENST00000562948 FBXO41Q8TF61 875 aa9.15□□□□□ -0.94
SCAPER-205ENST00000562948 MYH16Q9H6N6 1097 aa9.15□□□□□ -0.94
SCAPER-205ENST00000562948 PLEKHG2Q9H7P9 1386 aa9.15□□□□□ -0.94
SCAPER-205ENST00000562948 RTF1Q92541 710 aaKnown RBP9.15□□□□□ -0.95
SCAPER-205ENST00000562948 CHPF2Q9P2E5 772 aa9.15□□□□□ -0.95
SCAPER-205ENST00000562948 C1orf141Q5JVX7 400 aa9.14□□□□□ -0.95
SCAPER-205ENST00000562948 DDRGK1Q96HY6 314 aa9.14□□□□□ -0.95
SCAPER-205ENST00000562948 THRAP3Q9Y2W1 955 aaKnown RBP9.14□□□□□ -0.95
SCAPER-205ENST00000562948 ADCY9O60503 1353 aa9.14□□□□□ -0.95
SCAPER-205ENST00000562948 PTCD1O75127 700 aaKnown RBP9.14□□□□□ -0.95
SCAPER-205ENST00000562948 DDB1Q16531 1140 aa9.14□□□□□ -0.95
SCAPER-205ENST00000562948 NUP98P52948 1817 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 RBM10P98175 930 aaKnown RBP9.13□□□□□ -0.95
SCAPER-205ENST00000562948 COG6Q9Y2V7 657 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 BRPF1P55201 1214 aaPredicted RBP9.13□□□□□ -0.95
SCAPER-205ENST00000562948 SEPT12Q8IYM1 358 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 CCDC9Q9Y3X0 531 aaKnown RBP9.13□□□□□ -0.95
SCAPER-205ENST00000562948 C4AP0C0L4 1744 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 C4BP0C0L5 1744 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 SLC4A2P04920 1241 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 ITPK1Q13572 414 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 ILDR1Q86SU0 546 aaPredicted RBP9.13□□□□□ -0.95
SCAPER-205ENST00000562948 PCDHB15Q9Y5E8 787 aa9.13□□□□□ -0.95
SCAPER-205ENST00000562948 AFDNP55196 1824 aaKnown RBP9.12□□□□□ -0.95
SCAPER-205ENST00000562948 EXOC5O00471 708 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 PDE4AP27815 886 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 PROM2Q8N271 834 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 TMEM57Q8N5G2 664 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 SMC4Q9NTJ3 1288 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 LMOD3Q0VAK6 560 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 SIRT2Q8IXJ6 389 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 LRRC4BQ9NT99 713 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 ZNF831Q5JPB2 1677 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 TAF1P21675 1872 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 ERVV-2B6SEH9 535 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 IGHDP01880 384 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 A1BGP04217 495 aa9.12□□□□□ -0.95
SCAPER-205ENST00000562948 ABCC4O15439 1325 aa9.11□□□□□ -0.95
SCAPER-205ENST00000562948 EIF2S2P20042 333 aaKnown RBP9.11□□□□□ -0.95
SCAPER-205ENST00000562948 UBR3Q6ZT12 1888 aa9.11□□□□□ -0.95
SCAPER-205ENST00000562948 TEFQ10587 303 aa9.11□□□□□ -0.95
SCAPER-205ENST00000562948 CABP4P57796 275 aa9.1□□□□□ -0.95
SCAPER-205ENST00000562948 MEX3CQ5U5Q3 659 aaKnown RBP9.1□□□□□ -0.95
SCAPER-205ENST00000562948 ATF7IPQ6VMQ6 1270 aa9.1□□□□□ -0.95
SCAPER-205ENST00000562948 PDE4CQ08493 712 aa9.1□□□□□ -0.95
SCAPER-205ENST00000562948 ALDH1L2Q3SY69 923 aa9.1□□□□□ -0.95
SCAPER-205ENST00000562948 SYTL4Q96C24 671 aaPredicted RBP9.1□□□□□ -0.95
SCAPER-205ENST00000562948 C1orf115Q9H7X2 142 aa9.09□□□□□ -0.95
SCAPER-205ENST00000562948 RRAGDQ9NQL2 400 aaPredicted RBP9.09□□□□□ -0.95
SCAPER-205ENST00000562948 CEP350Q5VT06 3117 aa9.09□□□□□ -0.95
SCAPER-205ENST00000562948 ZBTB7BO15156 539 aaPredicted RBP9.09□□□□□ -0.95
SCAPER-205ENST00000562948 AAMPQ13685 434 aa9.09□□□□□ -0.95
SCAPER-205ENST00000562948 BCORQ6W2J9 1755 aa9.09□□□□□ -0.95
SCAPER-205ENST00000562948 INTS5Q6P9B9 1019 aaKnown RBP9.09□□□□□ -0.96
SCAPER-205ENST00000562948 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.96
SCAPER-205ENST00000562948 TRPC5Q9UL62 973 aaPredicted RBP9.09□□□□□ -0.96
SCAPER-205ENST00000562948 ATP10DQ9P241 1426 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 FGD1P98174 961 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 TTLL7Q6ZT98 887 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.08□□□□□ -0.96
SCAPER-205ENST00000562948 ANKRD36CQ5JPF3 1778 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 KDM2BQ8NHM5 1336 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 MYL6BP14649 208 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 FLIIQ13045 1269 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 HDGFL1Q5TGJ6 251 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 KAZALD1Q96I82 304 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 BACH2Q9BYV9 841 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 BABAM1Q9NWV8 329 aa9.08□□□□□ -0.96
SCAPER-205ENST00000562948 LINC00116Q8NCU8 138 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms