RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 THUMPD2Q9BTF0 503 aaKnown RBP21.52■■□□□ 1.04
PKD1-226ENST00000562425 CCDC87Q9NVE4 849 aa21.52■■□□□ 1.04
PKD1-226ENST00000562425 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
PKD1-226ENST00000562425 APAF1O14727 1248 aa21.51■■□□□ 1.03
PKD1-226ENST00000562425 KCNQ3O43525 872 aa21.51■■□□□ 1.03
PKD1-226ENST00000562425 NLGN2Q8NFZ4 835 aa21.51■■□□□ 1.03
PKD1-226ENST00000562425 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
PKD1-226ENST00000562425 SNRPA1P09661 255 aaKnown RBP21.5■■□□□ 1.03
PKD1-226ENST00000562425 INTS5Q6P9B9 1019 aaKnown RBP21.5■■□□□ 1.03
PKD1-226ENST00000562425 BABAM1Q9NWV8 329 aa21.5■■□□□ 1.03
PKD1-226ENST00000562425 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
PKD1-226ENST00000562425 CICQ96RK0 1608 aaPredicted RBP21.5■■□□□ 1.03
PKD1-226ENST00000562425 UBR2Q8IWV8 1755 aa21.49■■□□□ 1.03
PKD1-226ENST00000562425 AMIGO3Q86WK7 504 aa21.49■■□□□ 1.03
PKD1-226ENST00000562425 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
PKD1-226ENST00000562425 RFC4P35249 363 aa21.48■■□□□ 1.03
PKD1-226ENST00000562425 TRIM35Q9UPQ4 493 aa21.48■■□□□ 1.03
PKD1-226ENST00000562425 TJP1Q07157 1748 aa21.48■■□□□ 1.03
PKD1-226ENST00000562425 UBR3Q6ZT12 1888 aa21.47■■□□□ 1.03
PKD1-226ENST00000562425 SMIM5Q71RC9 77 aa21.47■■□□□ 1.03
PKD1-226ENST00000562425 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
PKD1-226ENST00000562425 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
PKD1-226ENST00000562425 CD2APQ9Y5K6 639 aa21.47■■□□□ 1.03
PKD1-226ENST00000562425 CALD1Q05682 793 aaKnown RBP21.46■■□□□ 1.03
PKD1-226ENST00000562425 YBX3P16989 372 aaKnown RBP eCLIP21.45■■□□□ 1.02
PKD1-226ENST00000562425 NPM2Q86SE8 214 aaKnown RBP21.45■■□□□ 1.02
PKD1-226ENST00000562425 CEP350Q5VT06 3117 aa21.44■■□□□ 1.02
PKD1-226ENST00000562425 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
PKD1-226ENST00000562425 MSL1Q68DK7 614 aa21.44■■□□□ 1.02
PKD1-226ENST00000562425 NLGN1Q8N2Q7 840 aa21.44■■□□□ 1.02
PKD1-226ENST00000562425 ZBTB1Q9Y2K1 713 aa21.44■■□□□ 1.02
PKD1-226ENST00000562425 EIF4A1P60842 406 aaKnown RBP21.43■■□□□ 1.02
PKD1-226ENST00000562425 FAM9BQ8IZU0 186 aa21.43■■□□□ 1.02
PKD1-226ENST00000562425 SOS1Q07889 1333 aaPredicted RBP21.43■■□□□ 1.02
PKD1-226ENST00000562425 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
PKD1-226ENST00000562425 A0A087WZG4 1122 aa21.42■■□□□ 1.02
PKD1-226ENST00000562425 USP16Q9Y5T5 823 aa21.42■■□□□ 1.02
PKD1-226ENST00000562425 CHL1O00533 1208 aa21.41■■□□□ 1.02
PKD1-226ENST00000562425 ZPR1O75312 459 aa21.41■■□□□ 1.02
PKD1-226ENST00000562425 IL6STP40189 918 aaPredicted RBP21.41■■□□□ 1.02
PKD1-226ENST00000562425 NCBP3Q53F19 620 aaKnown RBP21.41■■□□□ 1.02
PKD1-226ENST00000562425 LAS1LQ9Y4W2 734 aaKnown RBP21.41■■□□□ 1.02
PKD1-226ENST00000562425 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
PKD1-226ENST00000562425 A1BGP04217 495 aa21.4■■□□□ 1.02
PKD1-226ENST00000562425 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
PKD1-226ENST00000562425 CFAP44Q96MT7 982 aa21.4■■□□□ 1.02
PKD1-226ENST00000562425 COL15A1P39059 1388 aa21.39■■□□□ 1.02
PKD1-226ENST00000562425 EIF5P55010 431 aaKnown RBP21.39■■□□□ 1.01
PKD1-226ENST00000562425 CCDC27Q2M243 656 aa21.39■■□□□ 1.01
PKD1-226ENST00000562425 USP42Q9H9J4 1324 aaKnown RBP21.38■■□□□ 1.01
PKD1-226ENST00000562425 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
PKD1-226ENST00000562425 GYS1P13807 737 aa21.38■■□□□ 1.01
PKD1-226ENST00000562425 GNAI1P63096 354 aa21.38■■□□□ 1.01
PKD1-226ENST00000562425 NARFQ9UHQ1 456 aa21.38■■□□□ 1.01
PKD1-226ENST00000562425 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
PKD1-226ENST00000562425 IFT57Q9NWB7 429 aa21.37■■□□□ 1.01
PKD1-226ENST00000562425 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
PKD1-226ENST00000562425 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
PKD1-226ENST00000562425 SRP68Q9UHB9 627 aaKnown RBP21.36■■□□□ 1.01
PKD1-226ENST00000562425 ATP10DQ9P241 1426 aa21.36■■□□□ 1.01
PKD1-226ENST00000562425 MMP10P09238 476 aa21.34■■□□□ 1.01
PKD1-226ENST00000562425 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
PKD1-226ENST00000562425 WWC1Q8IX03 1113 aa21.34■■□□□ 1.01
PKD1-226ENST00000562425 ADCY9O60503 1353 aa21.34■■□□□ 1.01
PKD1-226ENST00000562425 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
PKD1-226ENST00000562425 PARP3Q9Y6F1 533 aa21.33■■□□□ 1.01
PKD1-226ENST00000562425 ERBB4Q15303 1308 aa21.32■■□□□ 1
PKD1-226ENST00000562425 FKBP8Q14318 412 aa21.32■■□□□ 1
PKD1-226ENST00000562425 MBIPQ9NS73 344 aa21.32■■□□□ 1
PKD1-226ENST00000562425 TBC1D2BQ9UPU7 963 aa21.32■■□□□ 1
PKD1-226ENST00000562425 NBPF26B4DH59 902 aa21.31■■□□□ 1
PKD1-226ENST00000562425 NBPF10Q6P3W6 841 aaKnown RBP21.31■■□□□ 1
PKD1-226ENST00000562425 DZIP3Q86Y13 1208 aaKnown RBP21.31■■□□□ 1
PKD1-226ENST00000562425 NBPF15Q8N660 670 aa21.31■■□□□ 1
PKD1-226ENST00000562425 GPBP1L1Q9HC44 474 aaPredicted RBP21.31■■□□□ 1
PKD1-226ENST00000562425 C4AP0C0L4 1744 aa21.3■■□□□ 1
PKD1-226ENST00000562425 HOXB7P09629 217 aa21.3■■□□□ 1
PKD1-226ENST00000562425 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
PKD1-226ENST00000562425 PIP4K2AP48426 406 aaPredicted RBP21.3■■□□□ 1
PKD1-226ENST00000562425 IL16Q14005 1332 aa21.29■■□□□ 1
PKD1-226ENST00000562425 WDR63Q8IWG1 891 aa21.29■■□□□ 1
PKD1-226ENST00000562425 SALL2Q9Y467 1007 aaPredicted RBP21.29■■□□□ 1
PKD1-226ENST00000562425 TM4SF1P30408 202 aa21.28■■□□□ 1
PKD1-226ENST00000562425 CHMP4AQ9BY43 222 aa21.28■■□□□ 1
PKD1-226ENST00000562425 BCL2L12Q9HB09 334 aa21.27■■□□□ 1
PKD1-226ENST00000562425 ZNF652Q9Y2D9 606 aa21.27■■□□□ 1
PKD1-226ENST00000562425 LAMB4A4D0S4 1761 aa21.27■■□□□ 1
PKD1-226ENST00000562425 RGL2O15211 777 aa21.26■□□□□ 0.99
PKD1-226ENST00000562425 CAMTA2O94983 1202 aa21.26■□□□□ 0.99
PKD1-226ENST00000562425 MYL6BP14649 208 aa21.26■□□□□ 0.99
PKD1-226ENST00000562425 DUSP27Q5VZP5 1158 aa21.26■□□□□ 0.99
PKD1-226ENST00000562425 CLEC4GQ6UXB4 293 aa21.26■□□□□ 0.99
PKD1-226ENST00000562425 NFIXQ14938 502 aa21.25■□□□□ 0.99
PKD1-226ENST00000562425 KRT24Q2M2I5 525 aa21.25■□□□□ 0.99
PKD1-226ENST00000562425 MIER1Q8N108 512 aa21.25■□□□□ 0.99
PKD1-226ENST00000562425 KIF13BQ9NQT8 1826 aa21.25■□□□□ 0.99
PKD1-226ENST00000562425 HDGFL1Q5TGJ6 251 aa21.24■□□□□ 0.99
PKD1-226ENST00000562425 KIF6Q6ZMV9 814 aa21.24■□□□□ 0.99
PKD1-226ENST00000562425 POLRMTO00411 1230 aaKnown RBP21.23■□□□□ 0.99
PKD1-226ENST00000562425 DDR1Q08345 913 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms