RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 C4AP0C0L4 1744 aa23.59■■□□□ 1.37
CMTM3-204ENST00000562357 CANXP27824 592 aaKnown RBP23.58■■□□□ 1.37
CMTM3-204ENST00000562357 DCTN1Q14203 1278 aa23.57■■□□□ 1.36
CMTM3-204ENST00000562357 SIPA1L3O60292 1781 aaPredicted RBP23.57■■□□□ 1.36
CMTM3-204ENST00000562357 A0A087WZG4 1122 aa23.56■■□□□ 1.36
CMTM3-204ENST00000562357 FKBP8Q14318 412 aa23.56■■□□□ 1.36
CMTM3-204ENST00000562357 NFE2L2Q16236 605 aa23.56■■□□□ 1.36
CMTM3-204ENST00000562357 USPL1Q5W0Q7 1092 aa23.56■■□□□ 1.36
CMTM3-204ENST00000562357 YBX3P16989 372 aaKnown RBP eCLIP23.55■■□□□ 1.364e-8■■□□□ 14.1
CMTM3-204ENST00000562357 PLEKHF1Q96S99 279 aa23.55■■□□□ 1.36
CMTM3-204ENST00000562357 NARFQ9UHQ1 456 aa23.55■■□□□ 1.36
CMTM3-204ENST00000562357 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
CMTM3-204ENST00000562357 TAF7Q15545 349 aaPredicted RBP23.54■■□□□ 1.36
CMTM3-204ENST00000562357 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
CMTM3-204ENST00000562357 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
CMTM3-204ENST00000562357 C10orf71Q711Q0 1435 aa23.53■■□□□ 1.36
CMTM3-204ENST00000562357 KCNQ3O43525 872 aa23.53■■□□□ 1.36
CMTM3-204ENST00000562357 TGFB2P61812 414 aa23.53■■□□□ 1.36
CMTM3-204ENST00000562357 SNRPA1P09661 255 aaKnown RBP23.52■■□□□ 1.36
CMTM3-204ENST00000562357 IL6STP40189 918 aaPredicted RBP23.51■■□□□ 1.35
CMTM3-204ENST00000562357 EIF5P55010 431 aaKnown RBP23.51■■□□□ 1.35
CMTM3-204ENST00000562357 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
CMTM3-204ENST00000562357 CHD4Q14839 1912 aa23.49■■□□□ 1.35
CMTM3-204ENST00000562357 DDR1Q08345 913 aa23.49■■□□□ 1.35
CMTM3-204ENST00000562357 LMOD3Q0VAK6 560 aa23.49■■□□□ 1.35
CMTM3-204ENST00000562357 PRKRIP1Q9H875 184 aaPredicted RBP23.49■■□□□ 1.35
CMTM3-204ENST00000562357 A1BGP04217 495 aa23.48■■□□□ 1.35
CMTM3-204ENST00000562357 PXDNLA1KZ92 1463 aa23.48■■□□□ 1.35
CMTM3-204ENST00000562357 POLRMTO00411 1230 aaKnown RBP23.47■■□□□ 1.35
CMTM3-204ENST00000562357 TM4SF1P30408 202 aa23.47■■□□□ 1.35
CMTM3-204ENST00000562357 UTRNP46939 3433 aa23.47■■□□□ 1.35
CMTM3-204ENST00000562357 RIPK4P57078 832 aa23.46■■□□□ 1.35
CMTM3-204ENST00000562357 NFIXQ14938 502 aa23.46■■□□□ 1.35
CMTM3-204ENST00000562357 USP16Q9Y5T5 823 aa23.46■■□□□ 1.35
CMTM3-204ENST00000562357 A0A0G2JLW4 131 aa23.45■■□□□ 1.34
CMTM3-204ENST00000562357 ZNF784Q8NCA9 323 aaPredicted RBP23.45■■□□□ 1.34
CMTM3-204ENST00000562357 MIS18AQ9NYP9 233 aa23.45■■□□□ 1.34
CMTM3-204ENST00000562357 KIF13BQ9NQT8 1826 aa23.45■■□□□ 1.34
CMTM3-204ENST00000562357 DPEP1P16444 411 aa23.44■■□□□ 1.34
CMTM3-204ENST00000562357 THUMPD2Q9BTF0 503 aaKnown RBP23.44■■□□□ 1.34
CMTM3-204ENST00000562357 TBC1D2BQ9UPU7 963 aa23.44■■□□□ 1.34
CMTM3-204ENST00000562357 BICDL1Q6ZP65 573 aa23.43■■□□□ 1.34
CMTM3-204ENST00000562357 BCL2L12Q9HB09 334 aa23.43■■□□□ 1.34
CMTM3-204ENST00000562357 BCS1LQ9Y276 419 aa23.43■■□□□ 1.34
CMTM3-204ENST00000562357 DLG5Q8TDM6 1919 aa23.42■■□□□ 1.34
CMTM3-204ENST00000562357 TMPOP42166 694 aaKnown RBP23.42■■□□□ 1.34
CMTM3-204ENST00000562357 DZIP3Q86Y13 1208 aaKnown RBP23.42■■□□□ 1.34
CMTM3-204ENST00000562357 CCDC146Q8IYE0 955 aa23.42■■□□□ 1.34
CMTM3-204ENST00000562357 PRAMEF22A3QJZ6 481 aa23.41■■□□□ 1.34
CMTM3-204ENST00000562357 SERPINB2P05120 415 aa23.41■■□□□ 1.34
CMTM3-204ENST00000562357 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
CMTM3-204ENST00000562357 PIM2Q9P1W9 311 aa23.41■■□□□ 1.34
CMTM3-204ENST00000562357 NPHP1O15259 732 aa23.4■■□□□ 1.34
CMTM3-204ENST00000562357 TSPYL4Q9UJ04 414 aa23.4■■□□□ 1.34
CMTM3-204ENST00000562357 ZNF652Q9Y2D9 606 aa23.4■■□□□ 1.34
CMTM3-204ENST00000562357 GOLGB1Q14789 3259 aaKnown RBP23.4■■□□□ 1.34
CMTM3-204ENST00000562357 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.33
CMTM3-204ENST00000562357 CARMIL3Q8ND23 1372 aa23.39■■□□□ 1.33
CMTM3-204ENST00000562357 EIF4A1P60842 406 aaKnown RBP23.38■■□□□ 1.33
CMTM3-204ENST00000562357 NEUROD2Q15784 382 aa23.38■■□□□ 1.33
CMTM3-204ENST00000562357 TBC1D9BQ66K14 1250 aa23.38■■□□□ 1.33
CMTM3-204ENST00000562357 SETDB2Q96T68 719 aa23.38■■□□□ 1.33
CMTM3-204ENST00000562357 SCN7AQ01118 1682 aa23.38■■□□□ 1.33
CMTM3-204ENST00000562357 N4BP2Q86UW6 1770 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-204ENST00000562357 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-204ENST00000562357 GIGYF1O75420 1035 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-204ENST00000562357 CAMTA2O94983 1202 aa23.37■■□□□ 1.33
CMTM3-204ENST00000562357 DALRD3Q5D0E6 543 aaKnown RBP23.37■■□□□ 1.33
CMTM3-204ENST00000562357 BABAM1Q9NWV8 329 aa23.37■■□□□ 1.33
CMTM3-204ENST00000562357 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
CMTM3-204ENST00000562357 RRP7AQ9Y3A4 280 aaKnown RBP23.37■■□□□ 1.33
CMTM3-204ENST00000562357 KIAA1551Q9HCM1 1747 aa23.36■■□□□ 1.33
CMTM3-204ENST00000562357 KDM3BQ7LBC6 1761 aa23.35■■□□□ 1.33
CMTM3-204ENST00000562357 CHRNA5P30532 468 aa23.35■■□□□ 1.33
CMTM3-204ENST00000562357 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
CMTM3-204ENST00000562357 ARHGAP27Q6ZUM4 889 aa23.34■■□□□ 1.33
CMTM3-204ENST00000562357 NBPF26B4DH59 902 aa23.33■■□□□ 1.33
CMTM3-204ENST00000562357 RGL2O15211 777 aa23.33■■□□□ 1.33
CMTM3-204ENST00000562357 KCNA3P22001 575 aa23.33■■□□□ 1.33
CMTM3-204ENST00000562357 NBPF10Q6P3W6 841 aaKnown RBP23.33■■□□□ 1.33
CMTM3-204ENST00000562357 NBPF15Q8N660 670 aa23.33■■□□□ 1.33
CMTM3-204ENST00000562357 CNBD1Q8NA66 436 aa23.33■■□□□ 1.33
CMTM3-204ENST00000562357 PDZRN3Q9UPQ7 1066 aa23.33■■□□□ 1.33
CMTM3-204ENST00000562357 LAMB4A4D0S4 1761 aa23.32■■□□□ 1.32
CMTM3-204ENST00000562357 H0YIN7 160 aa23.32■■□□□ 1.32
CMTM3-204ENST00000562357 ST5P78524 1137 aa23.32■■□□□ 1.32
CMTM3-204ENST00000562357 NRXN2Q9P2S2 1712 aa23.31■■□□□ 1.32
CMTM3-204ENST00000562357 C2CD5Q86YS7 1000 aa23.31■■□□□ 1.32
CMTM3-204ENST00000562357 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
CMTM3-204ENST00000562357 PDE6BP35913 854 aa23.3■■□□□ 1.32
CMTM3-204ENST00000562357 PRR5LQ6MZQ0 368 aa23.3■■□□□ 1.32
CMTM3-204ENST00000562357 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
CMTM3-204ENST00000562357 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
CMTM3-204ENST00000562357 BRIP1Q9BX63 1249 aa23.3■■□□□ 1.32
CMTM3-204ENST00000562357 LAS1LQ9Y4W2 734 aaKnown RBP23.3■■□□□ 1.32
CMTM3-204ENST00000562357 AFDNP55196 1824 aaKnown RBP23.3■■□□□ 1.32
CMTM3-204ENST00000562357 ATP10DQ9P241 1426 aa23.3■■□□□ 1.32
CMTM3-204ENST00000562357 ANP32CO43423 234 aa23.29■■□□□ 1.32
CMTM3-204ENST00000562357 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
CMTM3-204ENST00000562357 BCORQ6W2J9 1755 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms