RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 ZNF496Q96IT1 587 aaPredicted RBP12.72□□□□□ -0.37
NIP7-203ENST00000562131 CICQ96RK0 1608 aaPredicted RBP12.72□□□□□ -0.37
NIP7-203ENST00000562131 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 KCNQ3O43525 872 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 DPEP1P16444 411 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 TM4SF1P30408 202 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 DDR1Q08345 913 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
NIP7-203ENST00000562131 NARFQ9UHQ1 456 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 BCS1LQ9Y276 419 aa12.71□□□□□ -0.37
NIP7-203ENST00000562131 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
NIP7-203ENST00000562131 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
NIP7-203ENST00000562131 MCM10Q7L590 875 aa12.7□□□□□ -0.38
NIP7-203ENST00000562131 FMNL2Q96PY5 1086 aa12.7□□□□□ -0.38
NIP7-203ENST00000562131 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
NIP7-203ENST00000562131 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
NIP7-203ENST00000562131 PXDNLA1KZ92 1463 aa12.7□□□□□ -0.38
NIP7-203ENST00000562131 COL15A1P39059 1388 aa12.69□□□□□ -0.38
NIP7-203ENST00000562131 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
NIP7-203ENST00000562131 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
NIP7-203ENST00000562131 C4AP0C0L4 1744 aa12.69□□□□□ -0.38
NIP7-203ENST00000562131 CCDC184Q52MB2 194 aa12.69□□□□□ -0.38
NIP7-203ENST00000562131 C10orf71Q711Q0 1435 aa12.69□□□□□ -0.38
NIP7-203ENST00000562131 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
NIP7-203ENST00000562131 NEFMP07197 916 aa12.68□□□□□ -0.38
NIP7-203ENST00000562131 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
NIP7-203ENST00000562131 ARHGAP27Q6ZUM4 889 aa12.68□□□□□ -0.38
NIP7-203ENST00000562131 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
NIP7-203ENST00000562131 A0A087WZG4 1122 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
NIP7-203ENST00000562131 A1BGP04217 495 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 KCNA3P22001 575 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 CHRNA5P30532 468 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 NFIXQ14938 502 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 BICDL1Q6ZP65 573 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 ZNF526Q8TF50 670 aaPredicted RBP12.67□□□□□ -0.38
NIP7-203ENST00000562131 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 PIM2Q9P1W9 311 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
NIP7-203ENST00000562131 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
NIP7-203ENST00000562131 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
NIP7-203ENST00000562131 HTATSF1O43719 755 aaKnown RBP12.66□□□□□ -0.38
NIP7-203ENST00000562131 SERPINB2P05120 415 aa12.66□□□□□ -0.38
NIP7-203ENST00000562131 C1QTNF8P60827 252 aa12.66□□□□□ -0.38
NIP7-203ENST00000562131 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
NIP7-203ENST00000562131 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
NIP7-203ENST00000562131 MIS18AQ9NYP9 233 aa12.66□□□□□ -0.38
NIP7-203ENST00000562131 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
NIP7-203ENST00000562131 UBR2Q8IWV8 1755 aa12.66□□□□□ -0.38
NIP7-203ENST00000562131 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
NIP7-203ENST00000562131 IL6STP40189 918 aaPredicted RBP12.65□□□□□ -0.38
NIP7-203ENST00000562131 PIP4K2AP48426 406 aaPredicted RBP12.65□□□□□ -0.38
NIP7-203ENST00000562131 WDR43Q15061 677 aaKnown RBP eCLIP12.65□□□□□ -0.38
NIP7-203ENST00000562131 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
NIP7-203ENST00000562131 KIF13BQ9NQT8 1826 aa12.65□□□□□ -0.39
NIP7-203ENST00000562131 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
NIP7-203ENST00000562131 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
NIP7-203ENST00000562131 SIPA1L3O60292 1781 aaPredicted RBP12.64□□□□□ -0.39
NIP7-203ENST00000562131 KIAA1551Q9HCM1 1747 aa12.63□□□□□ -0.39
NIP7-203ENST00000562131 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
NIP7-203ENST00000562131 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
NIP7-203ENST00000562131 PNISRQ8TF01 805 aaKnown RBP12.63□□□□□ -0.39
NIP7-203ENST00000562131 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
NIP7-203ENST00000562131 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
NIP7-203ENST00000562131 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
NIP7-203ENST00000562131 NFE2L2Q16236 605 aa12.62□□□□□ -0.39
NIP7-203ENST00000562131 ADCY9O60503 1353 aa12.61□□□□□ -0.39
NIP7-203ENST00000562131 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
NIP7-203ENST00000562131 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
NIP7-203ENST00000562131 C2CD5Q86YS7 1000 aa12.61□□□□□ -0.39
NIP7-203ENST00000562131 CCDC24Q8N4L8 307 aa12.61□□□□□ -0.39
NIP7-203ENST00000562131 THUMPD2Q9BTF0 503 aaKnown RBP12.61□□□□□ -0.39
NIP7-203ENST00000562131 H0YIN7 160 aa12.6□□□□□ -0.39
NIP7-203ENST00000562131 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
NIP7-203ENST00000562131 SETDB2Q96T68 719 aa12.6□□□□□ -0.39
NIP7-203ENST00000562131 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
NIP7-203ENST00000562131 NPHP1O15259 732 aa12.59□□□□□ -0.39
NIP7-203ENST00000562131 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
NIP7-203ENST00000562131 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
NIP7-203ENST00000562131 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
NIP7-203ENST00000562131 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
NIP7-203ENST00000562131 RIPK4P57078 832 aa12.58□□□□□ -0.4
NIP7-203ENST00000562131 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
NIP7-203ENST00000562131 PRR5LQ6MZQ0 368 aa12.58□□□□□ -0.4
NIP7-203ENST00000562131 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
NIP7-203ENST00000562131 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
NIP7-203ENST00000562131 ZNF622Q969S3 477 aaKnown RBP eCLIP12.58□□□□□ -0.4
NIP7-203ENST00000562131 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
NIP7-203ENST00000562131 PDE6BP35913 854 aa12.57□□□□□ -0.4
NIP7-203ENST00000562131 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
NIP7-203ENST00000562131 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
NIP7-203ENST00000562131 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
NIP7-203ENST00000562131 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
NIP7-203ENST00000562131 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
NIP7-203ENST00000562131 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
NIP7-203ENST00000562131 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
NIP7-203ENST00000562131 RNF181Q9P0P0 153 aa12.56□□□□□ -0.4
NIP7-203ENST00000562131 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
NIP7-203ENST00000562131 RRP7AQ9Y3A4 280 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms