RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 STARD3NLO95772 234 aa20.49■□□□□ 0.87
CCDC113-203ENST00000561517 MMP10P09238 476 aa20.49■□□□□ 0.87
CCDC113-203ENST00000561517 TAF7Q15545 349 aaPredicted RBP20.48■□□□□ 0.87
CCDC113-203ENST00000561517 SRP68Q9UHB9 627 aaKnown RBP20.48■□□□□ 0.87
CCDC113-203ENST00000561517 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
CCDC113-203ENST00000561517 COL15A1P39059 1388 aa20.46■□□□□ 0.87
CCDC113-203ENST00000561517 EIF5P55010 431 aaKnown RBP20.45■□□□□ 0.86
CCDC113-203ENST00000561517 ZPR1O75312 459 aa20.44■□□□□ 0.86
CCDC113-203ENST00000561517 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
CCDC113-203ENST00000561517 FKBP8Q14318 412 aa20.44■□□□□ 0.86
CCDC113-203ENST00000561517 WDR43Q15061 677 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCDC113-203ENST00000561517 NARFQ9UHQ1 456 aa20.44■□□□□ 0.86
CCDC113-203ENST00000561517 SNRPA1P09661 255 aaKnown RBP20.43■□□□□ 0.86
CCDC113-203ENST00000561517 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
CCDC113-203ENST00000561517 GPR162Q16538 588 aa20.43■□□□□ 0.86
CCDC113-203ENST00000561517 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
CCDC113-203ENST00000561517 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
CCDC113-203ENST00000561517 KIAA1551Q9HCM1 1747 aa20.42■□□□□ 0.86
CCDC113-203ENST00000561517 RIPK4P57078 832 aa20.42■□□□□ 0.86
CCDC113-203ENST00000561517 USPL1Q5W0Q7 1092 aa20.42■□□□□ 0.86
CCDC113-203ENST00000561517 THUMPD2Q9BTF0 503 aaKnown RBP20.42■□□□□ 0.86
CCDC113-203ENST00000561517 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
CCDC113-203ENST00000561517 PARP3Q9Y6F1 533 aa20.42■□□□□ 0.86
CCDC113-203ENST00000561517 A0A087WZG4 1122 aa20.41■□□□□ 0.86
CCDC113-203ENST00000561517 A1BGP04217 495 aa20.41■□□□□ 0.86
CCDC113-203ENST00000561517 TM4SF1P30408 202 aa20.41■□□□□ 0.86
CCDC113-203ENST00000561517 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
CCDC113-203ENST00000561517 RUNDC1Q96C34 613 aa20.41■□□□□ 0.86
CCDC113-203ENST00000561517 MIS18AQ9NYP9 233 aa20.41■□□□□ 0.86
CCDC113-203ENST00000561517 C10orf71Q711Q0 1435 aa20.41■□□□□ 0.86
CCDC113-203ENST00000561517 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
CCDC113-203ENST00000561517 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
CCDC113-203ENST00000561517 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
CCDC113-203ENST00000561517 DDR1Q08345 913 aa20.4■□□□□ 0.86
CCDC113-203ENST00000561517 N4BP2Q86UW6 1770 aaPredicted RBP20.4■□□□□ 0.86
CCDC113-203ENST00000561517 CCDC146Q8IYE0 955 aa20.4■□□□□ 0.86
CCDC113-203ENST00000561517 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
CCDC113-203ENST00000561517 SCN7AQ01118 1682 aa20.39■□□□□ 0.86
CCDC113-203ENST00000561517 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.85
CCDC113-203ENST00000561517 YY1P25490 414 aa20.39■□□□□ 0.85
CCDC113-203ENST00000561517 LMOD3Q0VAK6 560 aa20.39■□□□□ 0.85
CCDC113-203ENST00000561517 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
CCDC113-203ENST00000561517 PELP1Q8IZL8 1130 aaKnown RBP20.38■□□□□ 0.85
CCDC113-203ENST00000561517 NRXN2Q9P2S2 1712 aa20.38■□□□□ 0.85
CCDC113-203ENST00000561517 BRCA1P38398 1863 aaKnown RBP20.37■□□□□ 0.85
CCDC113-203ENST00000561517 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
CCDC113-203ENST00000561517 TGFB2P61812 414 aa20.37■□□□□ 0.85
CCDC113-203ENST00000561517 PXDNLA1KZ92 1463 aa20.37■□□□□ 0.85
CCDC113-203ENST00000561517 BCORQ6W2J9 1755 aa20.36■□□□□ 0.85
CCDC113-203ENST00000561517 NFIXQ14938 502 aa20.36■□□□□ 0.85
CCDC113-203ENST00000561517 RRP7AQ9Y3A4 280 aaKnown RBP20.36■□□□□ 0.85
CCDC113-203ENST00000561517 GRIN3BO60391 1043 aa20.35■□□□□ 0.85
CCDC113-203ENST00000561517 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
CCDC113-203ENST00000561517 BABAM1Q9NWV8 329 aa20.35■□□□□ 0.85
CCDC113-203ENST00000561517 TRIM35Q9UPQ4 493 aa20.34■□□□□ 0.85
CCDC113-203ENST00000561517 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
CCDC113-203ENST00000561517 ZNF330Q9Y3S2 320 aaPredicted RBP20.34■□□□□ 0.85
CCDC113-203ENST00000561517 UTRNP46939 3433 aa20.33■□□□□ 0.85
CCDC113-203ENST00000561517 NBPF26B4DH59 902 aa20.33■□□□□ 0.85
CCDC113-203ENST00000561517 CAMTA2O94983 1202 aa20.33■□□□□ 0.85
CCDC113-203ENST00000561517 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
CCDC113-203ENST00000561517 NEUROD2Q15784 382 aa20.33■□□□□ 0.85
CCDC113-203ENST00000561517 NBPF10Q6P3W6 841 aaKnown RBP20.33■□□□□ 0.85
CCDC113-203ENST00000561517 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.85
CCDC113-203ENST00000561517 NBPF15Q8N660 670 aa20.33■□□□□ 0.85
CCDC113-203ENST00000561517 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
CCDC113-203ENST00000561517 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
CCDC113-203ENST00000561517 GOLGB1Q14789 3259 aaKnown RBP20.31■□□□□ 0.84
CCDC113-203ENST00000561517 A0A0G2JLW4 131 aa20.31■□□□□ 0.84
CCDC113-203ENST00000561517 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
CCDC113-203ENST00000561517 ANP32CO43423 234 aa20.3■□□□□ 0.84
CCDC113-203ENST00000561517 SERPINB2P05120 415 aa20.3■□□□□ 0.84
CCDC113-203ENST00000561517 DPEP1P16444 411 aa20.3■□□□□ 0.84
CCDC113-203ENST00000561517 TBC1D9BQ66K14 1250 aa20.3■□□□□ 0.84
CCDC113-203ENST00000561517 ARFGEF1Q9Y6D6 1849 aa20.3■□□□□ 0.84
CCDC113-203ENST00000561517 CHL1O00533 1208 aa20.28■□□□□ 0.84
CCDC113-203ENST00000561517 RGL2O15211 777 aa20.28■□□□□ 0.84
CCDC113-203ENST00000561517 KCNA3P22001 575 aa20.28■□□□□ 0.84
CCDC113-203ENST00000561517 BICDL1Q6ZP65 573 aa20.28■□□□□ 0.84
CCDC113-203ENST00000561517 WWC3Q9ULE0 1092 aa20.28■□□□□ 0.84
CCDC113-203ENST00000561517 ANKRD31Q8N7Z5 1873 aa20.27■□□□□ 0.84
CCDC113-203ENST00000561517 APAF1O14727 1248 aa20.27■□□□□ 0.84
CCDC113-203ENST00000561517 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.84
CCDC113-203ENST00000561517 NUP98P52948 1817 aa20.27■□□□□ 0.84
CCDC113-203ENST00000561517 DLEC1Q9Y238 1755 aa20.26■□□□□ 0.83
CCDC113-203ENST00000561517 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
CCDC113-203ENST00000561517 ERBB4Q15303 1308 aa20.26■□□□□ 0.83
CCDC113-203ENST00000561517 SETDB2Q96T68 719 aa20.24■□□□□ 0.83
CCDC113-203ENST00000561517 PIM2Q9P1W9 311 aa20.24■□□□□ 0.83
CCDC113-203ENST00000561517 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
CCDC113-203ENST00000561517 CHRNA5P30532 468 aa20.23■□□□□ 0.83
CCDC113-203ENST00000561517 CFAP44Q96MT7 982 aa20.23■□□□□ 0.83
CCDC113-203ENST00000561517 MRS2Q9HD23 443 aa20.23■□□□□ 0.83
CCDC113-203ENST00000561517 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
CCDC113-203ENST00000561517 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
CCDC113-203ENST00000561517 ZNF784Q8NCA9 323 aaPredicted RBP20.22■□□□□ 0.83
CCDC113-203ENST00000561517 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
CCDC113-203ENST00000561517 ZNF853P0CG23 659 aa20.21■□□□□ 0.83
CCDC113-203ENST00000561517 ERVV-1B6SEH8 477 aa20.2■□□□□ 0.82
CCDC113-203ENST00000561517 MYL6BP14649 208 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms