RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 FKBP8Q14318 412 aa27.36■■□□□ 1.97
TPM1-232ENST00000561425 NARFQ9UHQ1 456 aa27.36■■□□□ 1.97
TPM1-232ENST00000561425 TM4SF1P30408 202 aa27.35■■□□□ 1.97
TPM1-232ENST00000561425 COL15A1P39059 1388 aa27.35■■□□□ 1.97
TPM1-232ENST00000561425 GPR162Q16538 588 aa27.34■■□□□ 1.97
TPM1-232ENST00000561425 MAPK8IP3Q9UPT6 1336 aa27.34■■□□□ 1.97
TPM1-232ENST00000561425 YY1P25490 414 aa27.32■■□□□ 1.96
TPM1-232ENST00000561425 CANXP27824 592 aaKnown RBP27.32■■□□□ 1.96
TPM1-232ENST00000561425 USPL1Q5W0Q7 1092 aa27.32■■□□□ 1.96
TPM1-232ENST00000561425 BCL2L12Q9HB09 334 aa27.32■■□□□ 1.96
TPM1-232ENST00000561425 USP16Q9Y5T5 823 aa27.32■■□□□ 1.96
TPM1-232ENST00000561425 ZNF316A6NFI3 1004 aaPredicted RBP27.31■■□□□ 1.96
TPM1-232ENST00000561425 ZPR1O75312 459 aa27.31■■□□□ 1.96
TPM1-232ENST00000561425 SNRPA1P09661 255 aaKnown RBP27.31■■□□□ 1.96
TPM1-232ENST00000561425 YBX3P16989 372 aaKnown RBP eCLIP27.31■■□□□ 1.96
TPM1-232ENST00000561425 IL6STP40189 918 aaPredicted RBP27.31■■□□□ 1.96
TPM1-232ENST00000561425 PNISRQ8TF01 805 aaKnown RBP27.31■■□□□ 1.96
TPM1-232ENST00000561425 PARP3Q9Y6F1 533 aa27.31■■□□□ 1.96
TPM1-232ENST00000561425 DLG5Q8TDM6 1919 aa27.3■■□□□ 1.96
TPM1-232ENST00000561425 A1BGP04217 495 aa27.3■■□□□ 1.96
TPM1-232ENST00000561425 TMPOP42166 694 aaKnown RBP27.3■■□□□ 1.96
TPM1-232ENST00000561425 DDR1Q08345 913 aa27.3■■□□□ 1.96
TPM1-232ENST00000561425 A0A087WZG4 1122 aa27.29■■□□□ 1.96
TPM1-232ENST00000561425 PRAMEF22A3QJZ6 481 aa27.29■■□□□ 1.96
TPM1-232ENST00000561425 TGFB2P61812 414 aa27.29■■□□□ 1.96
TPM1-232ENST00000561425 MIS18AQ9NYP9 233 aa27.29■■□□□ 1.96
TPM1-232ENST00000561425 ADAMTS8Q9UP79 889 aa27.29■■□□□ 1.96
TPM1-232ENST00000561425 C10orf71Q711Q0 1435 aa27.29■■□□□ 1.96
TPM1-232ENST00000561425 RIPK4P57078 832 aa27.28■■□□□ 1.96
TPM1-232ENST00000561425 THUMPD2Q9BTF0 503 aaKnown RBP27.28■■□□□ 1.96
TPM1-232ENST00000561425 KIF13BQ9NQT8 1826 aa27.27■■□□□ 1.96
TPM1-232ENST00000561425 POLRMTO00411 1230 aaKnown RBP27.27■■□□□ 1.96
TPM1-232ENST00000561425 GRIN3BO60391 1043 aa27.27■■□□□ 1.96
TPM1-232ENST00000561425 UTRNP46939 3433 aa27.26■■□□□ 1.96
TPM1-232ENST00000561425 RUNDC1Q96C34 613 aa27.26■■□□□ 1.95
TPM1-232ENST00000561425 NFIXQ14938 502 aa27.25■■□□□ 1.95
TPM1-232ENST00000561425 EIF4A1P60842 406 aaKnown RBP27.24■■□□□ 1.95
TPM1-232ENST00000561425 WDR43Q15061 677 aaKnown RBP eCLIP27.24■■□□□ 1.95
TPM1-232ENST00000561425 BABAM1Q9NWV8 329 aa27.24■■□□□ 1.95
TPM1-232ENST00000561425 PXDNLA1KZ92 1463 aa27.24■■□□□ 1.95
TPM1-232ENST00000561425 GIGYF1O75420 1035 aaPredicted RBP27.23■■□□□ 1.95
TPM1-232ENST00000561425 LMOD3Q0VAK6 560 aa27.22■■□□□ 1.95
TPM1-232ENST00000561425 CCDC146Q8IYE0 955 aa27.22■■□□□ 1.95
TPM1-232ENST00000561425 PELP1Q8IZL8 1130 aaKnown RBP27.22■■□□□ 1.95
TPM1-232ENST00000561425 KIAA1551Q9HCM1 1747 aa27.21■■□□□ 1.95
TPM1-232ENST00000561425 NBPF26B4DH59 902 aa27.21■■□□□ 1.95
TPM1-232ENST00000561425 NBPF10Q6P3W6 841 aaKnown RBP27.21■■□□□ 1.95
TPM1-232ENST00000561425 NBPF15Q8N660 670 aa27.21■■□□□ 1.95
TPM1-232ENST00000561425 KDM3BQ7LBC6 1761 aa27.21■■□□□ 1.95
TPM1-232ENST00000561425 KCNA3P22001 575 aa27.2■■□□□ 1.94
TPM1-232ENST00000561425 TRIM35Q9UPQ4 493 aa27.2■■□□□ 1.94
TPM1-232ENST00000561425 TBC1D2BQ9UPU7 963 aa27.2■■□□□ 1.94
TPM1-232ENST00000561425 A0A0G2JLW4 131 aa27.19■■□□□ 1.94
TPM1-232ENST00000561425 CAMTA2O94983 1202 aa27.19■■□□□ 1.94
TPM1-232ENST00000561425 DPEP1P16444 411 aa27.18■■□□□ 1.94
TPM1-232ENST00000561425 RGL2O15211 777 aa27.17■■□□□ 1.94
TPM1-232ENST00000561425 RRP7AQ9Y3A4 280 aaKnown RBP27.17■■□□□ 1.94
TPM1-232ENST00000561425 NRXN2Q9P2S2 1712 aa27.16■■□□□ 1.94
TPM1-232ENST00000561425 SERPINB2P05120 415 aa27.16■■□□□ 1.94
TPM1-232ENST00000561425 TBC1D9BQ66K14 1250 aa27.16■■□□□ 1.94
TPM1-232ENST00000561425 GOLGB1Q14789 3259 aaKnown RBP27.16■■□□□ 1.94
TPM1-232ENST00000561425 CHD4Q14839 1912 aa27.16■■□□□ 1.94
TPM1-232ENST00000561425 PIP4K2AP48426 406 aaPredicted RBP27.15■■□□□ 1.94
TPM1-232ENST00000561425 CCDC184Q52MB2 194 aa27.15■■□□□ 1.94
TPM1-232ENST00000561425 DZIP3Q86Y13 1208 aaKnown RBP27.15■■□□□ 1.94
TPM1-232ENST00000561425 CHL1O00533 1208 aa27.14■■□□□ 1.94
TPM1-232ENST00000561425 CLEC4GQ6UXB4 293 aa27.14■■□□□ 1.94
TPM1-232ENST00000561425 TSPYL4Q9UJ04 414 aa27.14■■□□□ 1.94
TPM1-232ENST00000561425 ZNF330Q9Y3S2 320 aaPredicted RBP27.14■■□□□ 1.94
TPM1-232ENST00000561425 SCN7AQ01118 1682 aa27.12■■□□□ 1.93
TPM1-232ENST00000561425 NEUROD2Q15784 382 aa27.12■■□□□ 1.93
TPM1-232ENST00000561425 NPM2Q86SE8 214 aaKnown RBP27.12■■□□□ 1.93
TPM1-232ENST00000561425 ZNF784Q8NCA9 323 aaPredicted RBP27.11■■□□□ 1.93
TPM1-232ENST00000561425 N4BP2Q86UW6 1770 aaPredicted RBP27.09■■□□□ 1.93
TPM1-232ENST00000561425 BICDL1Q6ZP65 573 aa27.09■■□□□ 1.93
TPM1-232ENST00000561425 PIM2Q9P1W9 311 aa27.09■■□□□ 1.93
TPM1-232ENST00000561425 WWC3Q9ULE0 1092 aa27.09■■□□□ 1.93
TPM1-232ENST00000561425 LAMB4A4D0S4 1761 aa27.08■■□□□ 1.93
TPM1-232ENST00000561425 AFDNP55196 1824 aaKnown RBP27.08■■□□□ 1.93
TPM1-232ENST00000561425 ERBB4Q15303 1308 aa27.08■■□□□ 1.93
TPM1-232ENST00000561425 APAF1O14727 1248 aa27.07■■□□□ 1.92
TPM1-232ENST00000561425 CHRNA5P30532 468 aa27.07■■□□□ 1.92
TPM1-232ENST00000561425 SETDB2Q96T68 719 aa27.07■■□□□ 1.92
TPM1-232ENST00000561425 BCS1LQ9Y276 419 aa27.07■■□□□ 1.92
TPM1-232ENST00000561425 CARMIL3Q8ND23 1372 aa27.07■■□□□ 1.92
TPM1-232ENST00000561425 BRCA1P38398 1863 aaKnown RBP27.06■■□□□ 1.92
TPM1-232ENST00000561425 LRP10Q7Z4F1 713 aa27.06■■□□□ 1.92
TPM1-232ENST00000561425 BCORQ6W2J9 1755 aa27.06■■□□□ 1.92
TPM1-232ENST00000561425 PDIA6Q15084 440 aa27.05■■□□□ 1.92
TPM1-232ENST00000561425 PRR5LQ6MZQ0 368 aa27.05■■□□□ 1.92
TPM1-232ENST00000561425 ERVV-1B6SEH8 477 aa27.04■■□□□ 1.92
TPM1-232ENST00000561425 ANP32CO43423 234 aa27.04■■□□□ 1.92
TPM1-232ENST00000561425 ZNF853P0CG23 659 aa27.04■■□□□ 1.92
TPM1-232ENST00000561425 CFAP44Q96MT7 982 aa27.04■■□□□ 1.92
TPM1-232ENST00000561425 BRIP1Q9BX63 1249 aa27.04■■□□□ 1.92
TPM1-232ENST00000561425 ZNF652Q9Y2D9 606 aa27.04■■□□□ 1.92
TPM1-232ENST00000561425 DALRD3Q5D0E6 543 aaKnown RBP27.03■■□□□ 1.92
TPM1-232ENST00000561425 HLFQ16534 295 aa27.02■■□□□ 1.92
TPM1-232ENST00000561425 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
TPM1-232ENST00000561425 ADCY9O60503 1353 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms