RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
HERC1-212ENST00000561348 LMOD3Q0VAK6 560 aa13.28□□□□□ -0.28
HERC1-212ENST00000561348 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
HERC1-212ENST00000561348 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
HERC1-212ENST00000561348 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
HERC1-212ENST00000561348 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
HERC1-212ENST00000561348 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
HERC1-212ENST00000561348 ADAMTS7Q9UKP4 1686 aa13.28□□□□□ -0.28
HERC1-212ENST00000561348 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.28
HERC1-212ENST00000561348 PRAMEF22A3QJZ6 481 aa13.27□□□□□ -0.29
HERC1-212ENST00000561348 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
HERC1-212ENST00000561348 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
HERC1-212ENST00000561348 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
HERC1-212ENST00000561348 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.29
HERC1-212ENST00000561348 HEG1Q9ULI3 1381 aa13.27□□□□□ -0.29
HERC1-212ENST00000561348 KCPQ6ZWJ8 1503 aa13.27□□□□□ -0.29
HERC1-212ENST00000561348 TJP1Q07157 1748 aa13.27□□□□□ -0.29
HERC1-212ENST00000561348 ZPR1O75312 459 aa13.26□□□□□ -0.29
HERC1-212ENST00000561348 A1BGP04217 495 aa13.26□□□□□ -0.29
HERC1-212ENST00000561348 QSER1Q2KHR3 1735 aa13.26□□□□□ -0.29
HERC1-212ENST00000561348 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
HERC1-212ENST00000561348 PNISRQ8TF01 805 aaKnown RBP13.26□□□□□ -0.29
HERC1-212ENST00000561348 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
HERC1-212ENST00000561348 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
HERC1-212ENST00000561348 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
HERC1-212ENST00000561348 COL5A3P25940 1745 aaPredicted RBP13.25□□□□□ -0.29
HERC1-212ENST00000561348 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
HERC1-212ENST00000561348 NGEFQ8N5V2 710 aa13.25□□□□□ -0.29
HERC1-212ENST00000561348 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
HERC1-212ENST00000561348 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
HERC1-212ENST00000561348 MMP10P09238 476 aa13.24□□□□□ -0.29
HERC1-212ENST00000561348 BICDL1Q6ZP65 573 aa13.24□□□□□ -0.29
HERC1-212ENST00000561348 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
HERC1-212ENST00000561348 SYT17Q9BSW7 474 aa13.24□□□□□ -0.29
HERC1-212ENST00000561348 EIF2S2P20042 333 aaKnown RBP13.23□□□□□ -0.29
HERC1-212ENST00000561348 USPL1Q5W0Q7 1092 aa13.23□□□□□ -0.29
HERC1-212ENST00000561348 NLGN1Q8N2Q7 840 aa13.23□□□□□ -0.29
HERC1-212ENST00000561348 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
HERC1-212ENST00000561348 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
HERC1-212ENST00000561348 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
HERC1-212ENST00000561348 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
HERC1-212ENST00000561348 ZNF831Q5JPB2 1677 aa13.22□□□□□ -0.29
HERC1-212ENST00000561348 SOS1Q07889 1333 aaPredicted RBP13.22□□□□□ -0.29
HERC1-212ENST00000561348 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
HERC1-212ENST00000561348 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
HERC1-212ENST00000561348 COL15A1P39059 1388 aa13.21□□□□□ -0.29
HERC1-212ENST00000561348 GYS1P13807 737 aa13.21□□□□□ -0.29
HERC1-212ENST00000561348 MYL6BP14649 208 aa13.21□□□□□ -0.29
HERC1-212ENST00000561348 EIF4A1P60842 406 aaKnown RBP13.21□□□□□ -0.29
HERC1-212ENST00000561348 FKBP8Q14318 412 aa13.21□□□□□ -0.29
HERC1-212ENST00000561348 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
HERC1-212ENST00000561348 NPHP1O15259 732 aa13.2□□□□□ -0.3
HERC1-212ENST00000561348 GPR162Q16538 588 aa13.2□□□□□ -0.3
HERC1-212ENST00000561348 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
HERC1-212ENST00000561348 A0A087WZG4 1122 aa13.19□□□□□ -0.3
HERC1-212ENST00000561348 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
HERC1-212ENST00000561348 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
HERC1-212ENST00000561348 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
HERC1-212ENST00000561348 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
HERC1-212ENST00000561348 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
HERC1-212ENST00000561348 ELL2O00472 640 aaPredicted RBP13.18□□□□□ -0.3
HERC1-212ENST00000561348 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
HERC1-212ENST00000561348 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
HERC1-212ENST00000561348 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
HERC1-212ENST00000561348 FAM177BA6PVY3 158 aa13.17□□□□□ -0.3
HERC1-212ENST00000561348 CALD1Q05682 793 aaKnown RBP13.17□□□□□ -0.3
HERC1-212ENST00000561348 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
HERC1-212ENST00000561348 ANXA1P04083 346 aa13.16□□□□□ -0.3
HERC1-212ENST00000561348 MBIPQ9NS73 344 aa13.16□□□□□ -0.3
HERC1-212ENST00000561348 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
HERC1-212ENST00000561348 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 CHL1O00533 1208 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 GNAI1P63096 354 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 DDR1Q08345 913 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
HERC1-212ENST00000561348 NFIXQ14938 502 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
HERC1-212ENST00000561348 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
HERC1-212ENST00000561348 TBC1D9BQ66K14 1250 aa13.14□□□□□ -0.31
HERC1-212ENST00000561348 KIF6Q6ZMV9 814 aa13.14□□□□□ -0.31
HERC1-212ENST00000561348 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
HERC1-212ENST00000561348 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
HERC1-212ENST00000561348 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
HERC1-212ENST00000561348 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
HERC1-212ENST00000561348 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
HERC1-212ENST00000561348 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 SERPINB2P05120 415 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 HDGFL1Q5TGJ6 251 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 WWC1Q8IX03 1113 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 SETDB2Q96T68 719 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
HERC1-212ENST00000561348 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
HERC1-212ENST00000561348 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
HERC1-212ENST00000561348 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
HERC1-212ENST00000561348 COL24A1Q17RW2 1714 aa13.11□□□□□ -0.31
HERC1-212ENST00000561348 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms