RNA–Protein interactions for RNA: ENST00000561088.1

SPG21-214, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-214ENST00000561088 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
SPG21-214ENST00000561088 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
SPG21-214ENST00000561088 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
SPG21-214ENST00000561088 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
SPG21-214ENST00000561088 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
SPG21-214ENST00000561088 COL15A1P39059 1388 aa16.23■□□□□ 0.19
SPG21-214ENST00000561088 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
SPG21-214ENST00000561088 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
SPG21-214ENST00000561088 PLEKHF1Q96S99 279 aa16.21■□□□□ 0.19
SPG21-214ENST00000561088 KCNQ3O43525 872 aa16.2■□□□□ 0.18
SPG21-214ENST00000561088 USPL1Q5W0Q7 1092 aa16.2■□□□□ 0.18
SPG21-214ENST00000561088 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
SPG21-214ENST00000561088 FKBP8Q14318 412 aa16.19■□□□□ 0.18
SPG21-214ENST00000561088 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
SPG21-214ENST00000561088 WWC3Q9ULE0 1092 aa16.19■□□□□ 0.18
SPG21-214ENST00000561088 CHD4Q14839 1912 aa16.19■□□□□ 0.18
SPG21-214ENST00000561088 A0A087WZG4 1122 aa16.18■□□□□ 0.18
SPG21-214ENST00000561088 CCDC146Q8IYE0 955 aa16.18■□□□□ 0.18
SPG21-214ENST00000561088 PNISRQ8TF01 805 aaKnown RBP16.18■□□□□ 0.18
SPG21-214ENST00000561088 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
SPG21-214ENST00000561088 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
SPG21-214ENST00000561088 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
SPG21-214ENST00000561088 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
SPG21-214ENST00000561088 RIPK4P57078 832 aa16.17■□□□□ 0.18
SPG21-214ENST00000561088 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
SPG21-214ENST00000561088 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
SPG21-214ENST00000561088 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
SPG21-214ENST00000561088 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
SPG21-214ENST00000561088 C10orf71Q711Q0 1435 aa16.16■□□□□ 0.18
SPG21-214ENST00000561088 A1BGP04217 495 aa16.15■□□□□ 0.18
SPG21-214ENST00000561088 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPG21-214ENST00000561088 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
SPG21-214ENST00000561088 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
SPG21-214ENST00000561088 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
SPG21-214ENST00000561088 KIF13BQ9NQT8 1826 aa16.15■□□□□ 0.18
SPG21-214ENST00000561088 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
SPG21-214ENST00000561088 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
SPG21-214ENST00000561088 DDR1Q08345 913 aa16.14■□□□□ 0.17
SPG21-214ENST00000561088 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
SPG21-214ENST00000561088 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
SPG21-214ENST00000561088 SCN7AQ01118 1682 aa16.14■□□□□ 0.17
SPG21-214ENST00000561088 LAMB4A4D0S4 1761 aa16.13■□□□□ 0.17
SPG21-214ENST00000561088 PRAMEF22A3QJZ6 481 aa16.13■□□□□ 0.17
SPG21-214ENST00000561088 TMPOP42166 694 aaKnown RBP16.13■□□□□ 0.17
SPG21-214ENST00000561088 PIP4K2AP48426 406 aaPredicted RBP16.13■□□□□ 0.17
SPG21-214ENST00000561088 TGFB2P61812 414 aa16.13■□□□□ 0.17
SPG21-214ENST00000561088 ADAMTS8Q9UP79 889 aa16.13■□□□□ 0.17
SPG21-214ENST00000561088 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
SPG21-214ENST00000561088 USP16Q9Y5T5 823 aa16.13■□□□□ 0.17
SPG21-214ENST00000561088 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
SPG21-214ENST00000561088 A0A0G2JLW4 131 aa16.12■□□□□ 0.17
SPG21-214ENST00000561088 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
SPG21-214ENST00000561088 NPHP1O15259 732 aa16.12■□□□□ 0.17
SPG21-214ENST00000561088 NFIXQ14938 502 aa16.12■□□□□ 0.17
SPG21-214ENST00000561088 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
SPG21-214ENST00000561088 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
SPG21-214ENST00000561088 ANP32CO43423 234 aa16.1■□□□□ 0.17
SPG21-214ENST00000561088 DPEP1P16444 411 aa16.1■□□□□ 0.17
SPG21-214ENST00000561088 TM4SF1P30408 202 aa16.1■□□□□ 0.17
SPG21-214ENST00000561088 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
SPG21-214ENST00000561088 AFDNP55196 1824 aaKnown RBP16.1■□□□□ 0.17
SPG21-214ENST00000561088 KIAA1551Q9HCM1 1747 aa16.09■□□□□ 0.17
SPG21-214ENST00000561088 SERPINB2P05120 415 aa16.09■□□□□ 0.17
SPG21-214ENST00000561088 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
SPG21-214ENST00000561088 LAS1LQ9Y4W2 734 aaKnown RBP16.09■□□□□ 0.17
SPG21-214ENST00000561088 BCORQ6W2J9 1755 aa16.08■□□□□ 0.17
SPG21-214ENST00000561088 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
SPG21-214ENST00000561088 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
SPG21-214ENST00000561088 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
SPG21-214ENST00000561088 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
SPG21-214ENST00000561088 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
SPG21-214ENST00000561088 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
SPG21-214ENST00000561088 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
SPG21-214ENST00000561088 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
SPG21-214ENST00000561088 PIM2Q9P1W9 311 aa16.06■□□□□ 0.16
SPG21-214ENST00000561088 NBPF26B4DH59 902 aa16.05■□□□□ 0.16
SPG21-214ENST00000561088 MYL6BP14649 208 aa16.05■□□□□ 0.16
SPG21-214ENST00000561088 CHRNA5P30532 468 aa16.05■□□□□ 0.16
SPG21-214ENST00000561088 NBPF10Q6P3W6 841 aaKnown RBP16.05■□□□□ 0.16
SPG21-214ENST00000561088 NBPF15Q8N660 670 aa16.05■□□□□ 0.16
SPG21-214ENST00000561088 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
SPG21-214ENST00000561088 BRCA1P38398 1863 aaKnown RBP16.05■□□□□ 0.16
SPG21-214ENST00000561088 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
SPG21-214ENST00000561088 DALRD3Q5D0E6 543 aaKnown RBP16.04■□□□□ 0.16
SPG21-214ENST00000561088 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
SPG21-214ENST00000561088 CNBD1Q8NA66 436 aa16.04■□□□□ 0.16
SPG21-214ENST00000561088 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
SPG21-214ENST00000561088 BABAM1Q9NWV8 329 aa16.04■□□□□ 0.16
SPG21-214ENST00000561088 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
SPG21-214ENST00000561088 APAF1O14727 1248 aa16.03■□□□□ 0.16
SPG21-214ENST00000561088 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
SPG21-214ENST00000561088 ST5P78524 1137 aa16.03■□□□□ 0.16
SPG21-214ENST00000561088 ARHGAP27Q6ZUM4 889 aa16.03■□□□□ 0.16
SPG21-214ENST00000561088 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
SPG21-214ENST00000561088 NBPF5PQ86XG9 351 aaPredicted RBP16.02■□□□□ 0.16
SPG21-214ENST00000561088 C2CD5Q86YS7 1000 aa16.02■□□□□ 0.16
SPG21-214ENST00000561088 ARFGEF1Q9Y6D6 1849 aa16.01■□□□□ 0.15
SPG21-214ENST00000561088 H0YIN7 160 aa16.01■□□□□ 0.15
SPG21-214ENST00000561088 KCNA3P22001 575 aa16.01■□□□□ 0.15
SPG21-214ENST00000561088 CALD1Q05682 793 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms