RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FERMT3Q86UX7 667 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 JAZF1Q86VZ6 243 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 SMC5Q8IY18 1101 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 NLGN1Q8N2Q7 840 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 FBF1Q8TES7 1133 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 APPBP2Q92624 585 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 STIM2Q9P246 746 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 DDX41Q9UJV9 622 aaKnown RBP2.7□□□□□ -1.98
RTF1-207ENST00000561076 WWC3Q9ULE0 1092 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 FAN1Q9Y2M0 1017 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 SLC27A5Q9Y2P5 690 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 EMILIN1Q9Y6C2 1016 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 AK5Q9Y6K8 562 aa2.7□□□□□ -1.98
RTF1-207ENST00000561076 C19orf67A6NJJ6 358 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 CREB3O43889 395 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 GIGYF1O75420 1035 aaPredicted RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 NR1I2O75469 434 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 CENPBP07199 599 aaPredicted RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 CCNYL3P0C7X3 344 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 RAB15P59190 212 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 DNM1Q05193 864 aaKnown RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 PAK2Q13177 524 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 CNGB1Q14028 1251 aaPredicted RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 DSC3Q14574 896 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 BRD3Q15059 726 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 PROX2Q3B8N5 592 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 PLEKHG6Q3KR16 790 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 C8orf34Q49A92 452 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 ODR4Q5SWX8 454 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 ASTLQ6HA08 431 aaPredicted RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 TMED8Q6PL24 325 aaPredicted RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 HOMER1Q86YM7 354 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 MCF2L2Q86YR7 1114 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 FMNL3Q8IVF7 1028 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 WDR75Q8IWA0 830 aaKnown RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 CCDC24Q8N4L8 307 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.69□□□□□ -1.98
RTF1-207ENST00000561076 GAS2L2Q8NHY3 880 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 SLC39A7Q92504 469 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 MKL1Q969V6 931 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 DCBLD2Q96PD2 775 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 KCNK17Q96T54 332 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 NAP1L4Q99733 375 aaKnown RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 NUDT12Q9BQG2 462 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 IRF2BPLQ9H1B7 796 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 CCDC87Q9NVE4 849 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 GEMIN8Q9NWZ8 242 aaKnown RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 PPP4R2Q9NY27 417 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 DDX56Q9NY93 547 aaKnown RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 FAM13BQ9NYF5 915 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 GABBR1Q9UBS5 961 aa2.69□□□□□ -1.98
RTF1-207ENST00000561076 SEPT9Q9UHD8 586 aaPredicted RBP2.69□□□□□ -1.98
RTF1-207ENST00000561076 ENPP3O14638 875 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 GIPC1O14908 333 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 ZPR1O75312 459 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 F12P00748 615 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 RPLP1P05386 114 aaKnown RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 HSP90AA1P07900 732 aaKnown RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 NPR3P17342 541 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 ATF4P18848 351 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 PWP1Q13610 501 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 PPP2R5AQ15172 486 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 TAF1CQ15572 869 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 ZRSR2Q15696 482 aaKnown RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 FAM98CQ17RN3 349 aaKnown RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 TSGA10IPQ3SY00 556 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 ARSHQ5FYA8 562 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 CT47A1Q5JQC4 288 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 MORN1Q5T089 497 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 AXDND1Q5T1B0 1012 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 SPTY2D1Q68D10 685 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 CAPN12Q6ZSI9 719 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 ANKS3Q6ZW76 656 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 APBB1IPQ7Z5R6 666 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 BPHLQ86WA6 291 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 RELL1Q8IUW5 271 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 ALKBH8Q96BT7 664 aaKnown RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 NGLY1Q96IV0 654 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 SEC16BQ96JE7 1060 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 CCDC85AQ96PX6 553 aaPredicted RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 DEPDC7Q96QD5 511 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 CSRNP1Q96S65 589 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 SPON2Q9BUD6 331 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 ZSWIM6Q9HCJ5 1215 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 HOMER2Q9NSB8 354 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 FANCLQ9NW38 375 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 SLC52A1Q9NWF4 448 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 CHIC2Q9UKJ5 165 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 CDV3Q9UKY7 258 aaKnown RBP2.68□□□□□ -1.98
RTF1-207ENST00000561076 STRIP2Q9ULQ0 834 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 LHX6Q9UPM6 363 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 COMMD10Q9Y6G5 202 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 ATAD2Q6PL18 1390 aa2.68□□□□□ -1.98
RTF1-207ENST00000561076 A0A0U1RQG5 324 aaPredicted RBP2.67□□□□□ -1.98
RTF1-207ENST00000561076 C3orf80F5H4A9 247 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 GPR182O15218 404 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 NPHP1O15259 732 aa2.67□□□□□ -1.98
RTF1-207ENST00000561076 ACTN4O43707 911 aaKnown RBP2.67□□□□□ -1.98
RTF1-207ENST00000561076 CPNE3O75131 537 aaKnown RBP2.67□□□□□ -1.98
RTF1-207ENST00000561076 WDHD1O75717 1129 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms