RNA–Protein interactions for RNA: ENST00000560993.1

SEMA4B-217, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-217ENST00000560993 TM4SF1P30408 202 aa20.26■□□□□ 0.83
SEMA4B-217ENST00000560993 DALRD3Q5D0E6 543 aaKnown RBP20.26■□□□□ 0.83
SEMA4B-217ENST00000560993 AEBP1Q8IUX7 1158 aa20.26■□□□□ 0.83
SEMA4B-217ENST00000560993 RNF181Q9P0P0 153 aa20.26■□□□□ 0.83
SEMA4B-217ENST00000560993 POLRMTO00411 1230 aaKnown RBP20.25■□□□□ 0.83
SEMA4B-217ENST00000560993 CABP4P57796 275 aa20.25■□□□□ 0.83
SEMA4B-217ENST00000560993 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
SEMA4B-217ENST00000560993 NFATC2IPQ8NCF5 419 aa20.25■□□□□ 0.83
SEMA4B-217ENST00000560993 HSP90AB1P08238 724 aaKnown RBP20.24■□□□□ 0.83
SEMA4B-217ENST00000560993 PLEKHO1Q53GL0 409 aaPredicted RBP20.24■□□□□ 0.83
SEMA4B-217ENST00000560993 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
SEMA4B-217ENST00000560993 KDM2BQ8NHM5 1336 aa20.22■□□□□ 0.83
SEMA4B-217ENST00000560993 MTHFSP49914 203 aa20.21■□□□□ 0.83
SEMA4B-217ENST00000560993 RASSF7Q02833 373 aa20.21■□□□□ 0.83
SEMA4B-217ENST00000560993 TNRC6CQ9HCJ0 1690 aaKnown RBP20.21■□□□□ 0.83
SEMA4B-217ENST00000560993 AMOTQ4VCS5 1084 aa20.2■□□□□ 0.82
SEMA4B-217ENST00000560993 AFDNP55196 1824 aaKnown RBP20.2■□□□□ 0.82
SEMA4B-217ENST00000560993 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
SEMA4B-217ENST00000560993 BCL2L12Q9HB09 334 aa20.18■□□□□ 0.82
SEMA4B-217ENST00000560993 NRXN2Q9P2S2 1712 aa20.18■□□□□ 0.82
SEMA4B-217ENST00000560993 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
SEMA4B-217ENST00000560993 POTECB2RU33 542 aa20.17■□□□□ 0.82
SEMA4B-217ENST00000560993 CAPN15O75808 1086 aa20.17■□□□□ 0.82
SEMA4B-217ENST00000560993 NFIXQ14938 502 aa20.17■□□□□ 0.82
SEMA4B-217ENST00000560993 USPL1Q5W0Q7 1092 aa20.17■□□□□ 0.82
SEMA4B-217ENST00000560993 SOS1Q07889 1333 aaPredicted RBP20.17■□□□□ 0.82
SEMA4B-217ENST00000560993 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
SEMA4B-217ENST00000560993 SMC1BQ8NDV3 1235 aa20.16■□□□□ 0.82
SEMA4B-217ENST00000560993 PNISRQ8TF01 805 aaKnown RBP20.16■□□□□ 0.82
SEMA4B-217ENST00000560993 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
SEMA4B-217ENST00000560993 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
SEMA4B-217ENST00000560993 CCDC88AQ3V6T2 1871 aa20.15■□□□□ 0.82
SEMA4B-217ENST00000560993 GLTPD2A6NH11 291 aa20.14■□□□□ 0.81
SEMA4B-217ENST00000560993 CYP19A1P11511 503 aaPredicted RBP20.14■□□□□ 0.81
SEMA4B-217ENST00000560993 SULT6B1Q6IMI4 303 aa20.14■□□□□ 0.81
SEMA4B-217ENST00000560993 TNS4Q8IZW8 715 aa20.14■□□□□ 0.81
SEMA4B-217ENST00000560993 DLEC1Q9Y238 1755 aa20.13■□□□□ 0.81
SEMA4B-217ENST00000560993 NFKBIEO00221 500 aa20.13■□□□□ 0.81
SEMA4B-217ENST00000560993 C1orf141Q5JVX7 400 aa20.13■□□□□ 0.81
SEMA4B-217ENST00000560993 CARMIL3Q8ND23 1372 aa20.12■□□□□ 0.81
SEMA4B-217ENST00000560993 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
SEMA4B-217ENST00000560993 LMNB1P20700 586 aa20.12■□□□□ 0.81
SEMA4B-217ENST00000560993 IL13P35225 146 aa20.12■□□□□ 0.81
SEMA4B-217ENST00000560993 SLC39A6Q13433 755 aa20.12■□□□□ 0.81
SEMA4B-217ENST00000560993 NARFQ9UHQ1 456 aa20.12■□□□□ 0.81
SEMA4B-217ENST00000560993 VEGFAP15692 232 aaPredicted RBP20.11■□□□□ 0.81
SEMA4B-217ENST00000560993 FAM9BQ8IZU0 186 aa20.11■□□□□ 0.81
SEMA4B-217ENST00000560993 SLC52A2Q9HAB3 445 aa20.11■□□□□ 0.81
SEMA4B-217ENST00000560993 ZBTB1Q9Y2K1 713 aa20.11■□□□□ 0.81
SEMA4B-217ENST00000560993 ZPR1O75312 459 aa20.1■□□□□ 0.81
SEMA4B-217ENST00000560993 HSPA1AP0DMV8 641 aaKnown RBP20.1■□□□□ 0.81
SEMA4B-217ENST00000560993 HSPA1BP0DMV9 641 aaKnown RBP20.1■□□□□ 0.81
SEMA4B-217ENST00000560993 SERPINB2P05120 415 aa20.09■□□□□ 0.81
SEMA4B-217ENST00000560993 MRC1P22897 1456 aa20.09■□□□□ 0.81
SEMA4B-217ENST00000560993 TIAM2Q8IVF5 1701 aa20.08■□□□□ 0.81
SEMA4B-217ENST00000560993 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.81
SEMA4B-217ENST00000560993 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
SEMA4B-217ENST00000560993 COL15A1P39059 1388 aa20.08■□□□□ 0.8
SEMA4B-217ENST00000560993 ANKRD31Q8N7Z5 1873 aa20.07■□□□□ 0.8
SEMA4B-217ENST00000560993 AKAP4Q5JQC9 854 aa20.07■□□□□ 0.8
SEMA4B-217ENST00000560993 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
SEMA4B-217ENST00000560993 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
SEMA4B-217ENST00000560993 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
SEMA4B-217ENST00000560993 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
SEMA4B-217ENST00000560993 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
SEMA4B-217ENST00000560993 POTEIP0CG38 1075 aa20.03■□□□□ 0.8
SEMA4B-217ENST00000560993 POTEJP0CG39 1038 aa20.03■□□□□ 0.8
SEMA4B-217ENST00000560993 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
SEMA4B-217ENST00000560993 UBR2Q8IWV8 1755 aa20.03■□□□□ 0.8
SEMA4B-217ENST00000560993 FER1L6Q2WGJ9 1857 aa20.03■□□□□ 0.8
SEMA4B-217ENST00000560993 DICER1Q9UPY3 1922 aaKnown RBP20.02■□□□□ 0.8
SEMA4B-217ENST00000560993 EIF5P55010 431 aaKnown RBP20.02■□□□□ 0.8
SEMA4B-217ENST00000560993 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
SEMA4B-217ENST00000560993 COL11A2P13942 1736 aaPredicted RBP20.02■□□□□ 0.79
SEMA4B-217ENST00000560993 H0YIN7 160 aa20.01■□□□□ 0.79
SEMA4B-217ENST00000560993 MTHFSDQ2M296 383 aaKnown RBP20.01■□□□□ 0.79
SEMA4B-217ENST00000560993 TBC1D9BQ66K14 1250 aa20.01■□□□□ 0.79
SEMA4B-217ENST00000560993 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
SEMA4B-217ENST00000560993 YTHDC1Q96MU7 727 aaKnown RBP20.01■□□□□ 0.79
SEMA4B-217ENST00000560993 HMOX1P09601 288 aa20■□□□□ 0.79
SEMA4B-217ENST00000560993 CANXP27824 592 aaKnown RBP20■□□□□ 0.79
SEMA4B-217ENST00000560993 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
SEMA4B-217ENST00000560993 U2SURPO15042 1029 aaKnown RBP19.99■□□□□ 0.79
SEMA4B-217ENST00000560993 U2AF1L5P0DN76 240 aaPredicted RBP19.99■□□□□ 0.79
SEMA4B-217ENST00000560993 U2AF1Q01081 240 aaKnown RBP eCLIP19.99■□□□□ 0.79
SEMA4B-217ENST00000560993 SLX4Q8IY92 1834 aa19.98■□□□□ 0.79
SEMA4B-217ENST00000560993 C21orf2O43822 256 aa19.98■□□□□ 0.79
SEMA4B-217ENST00000560993 ZNF219Q9P2Y4 722 aaPredicted RBP19.98■□□□□ 0.79
SEMA4B-217ENST00000560993 PRR5LQ6MZQ0 368 aa19.97■□□□□ 0.79
SEMA4B-217ENST00000560993 BRIP1Q9BX63 1249 aa19.97■□□□□ 0.79
SEMA4B-217ENST00000560993 ERFEQ4G0M1 354 aa19.96■□□□□ 0.79
SEMA4B-217ENST00000560993 ZNF622Q969S3 477 aaKnown RBP eCLIP19.96■□□□□ 0.79
SEMA4B-217ENST00000560993 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
SEMA4B-217ENST00000560993 MKRN1Q9UHC7 482 aaKnown RBP19.96■□□□□ 0.79
SEMA4B-217ENST00000560993 DDNO94850 711 aaPredicted RBP19.95■□□□□ 0.78
SEMA4B-217ENST00000560993 CHADLQ6NUI6 762 aa19.95■□□□□ 0.78
SEMA4B-217ENST00000560993 DPY19L2Q6NUT2 758 aa19.95■□□□□ 0.78
SEMA4B-217ENST00000560993 CREBZFQ9NS37 354 aa19.95■□□□□ 0.78
SEMA4B-217ENST00000560993 SCN7AQ01118 1682 aa19.94■□□□□ 0.78
SEMA4B-217ENST00000560993 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms