RNA–Protein interactions for RNA: ENST00000560884.5

CPNE6-219, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-219ENST00000560884 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
CPNE6-219ENST00000560884 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
CPNE6-219ENST00000560884 NRXN2Q9P2S2 1712 aa17.38■□□□□ 0.37
CPNE6-219ENST00000560884 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
CPNE6-219ENST00000560884 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
CPNE6-219ENST00000560884 CCDC146Q8IYE0 955 aa17.37■□□□□ 0.37
CPNE6-219ENST00000560884 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
CPNE6-219ENST00000560884 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
CPNE6-219ENST00000560884 RFC4P35249 363 aa17.36■□□□□ 0.37
CPNE6-219ENST00000560884 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
CPNE6-219ENST00000560884 SRP68Q9UHB9 627 aaKnown RBP17.36■□□□□ 0.37
CPNE6-219ENST00000560884 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-219ENST00000560884 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
CPNE6-219ENST00000560884 STARD3NLO95772 234 aa17.35■□□□□ 0.37
CPNE6-219ENST00000560884 MMP10P09238 476 aa17.35■□□□□ 0.37
CPNE6-219ENST00000560884 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
CPNE6-219ENST00000560884 TEX13AQ9BXU3 409 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-219ENST00000560884 C10orf71Q711Q0 1435 aa17.35■□□□□ 0.37
CPNE6-219ENST00000560884 RIPK4P57078 832 aa17.34■□□□□ 0.37
CPNE6-219ENST00000560884 CHD4Q14839 1912 aa17.34■□□□□ 0.37
CPNE6-219ENST00000560884 KLHL34Q8N239 644 aa17.34■□□□□ 0.37
CPNE6-219ENST00000560884 NLGN1Q8N2Q7 840 aa17.34■□□□□ 0.37
CPNE6-219ENST00000560884 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
CPNE6-219ENST00000560884 EIF5P55010 431 aaKnown RBP17.33■□□□□ 0.36
CPNE6-219ENST00000560884 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
CPNE6-219ENST00000560884 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.36
CPNE6-219ENST00000560884 UTRNP46939 3433 aa17.32■□□□□ 0.36
CPNE6-219ENST00000560884 GOLGB1Q14789 3259 aaKnown RBP17.32■□□□□ 0.36
CPNE6-219ENST00000560884 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
CPNE6-219ENST00000560884 FKBP8Q14318 412 aa17.32■□□□□ 0.36
CPNE6-219ENST00000560884 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
CPNE6-219ENST00000560884 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
CPNE6-219ENST00000560884 A1BGP04217 495 aa17.31■□□□□ 0.36
CPNE6-219ENST00000560884 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
CPNE6-219ENST00000560884 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
CPNE6-219ENST00000560884 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
CPNE6-219ENST00000560884 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
CPNE6-219ENST00000560884 NARFQ9UHQ1 456 aa17.31■□□□□ 0.36
CPNE6-219ENST00000560884 TRIM35Q9UPQ4 493 aa17.31■□□□□ 0.36
CPNE6-219ENST00000560884 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
CPNE6-219ENST00000560884 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
CPNE6-219ENST00000560884 DDR1Q08345 913 aa17.3■□□□□ 0.36
CPNE6-219ENST00000560884 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
CPNE6-219ENST00000560884 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
CPNE6-219ENST00000560884 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
CPNE6-219ENST00000560884 ANP32CO43423 234 aa17.28■□□□□ 0.36
CPNE6-219ENST00000560884 ZPR1O75312 459 aa17.28■□□□□ 0.36
CPNE6-219ENST00000560884 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
CPNE6-219ENST00000560884 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
CPNE6-219ENST00000560884 POLRMTO00411 1230 aaKnown RBP17.27■□□□□ 0.36
CPNE6-219ENST00000560884 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
CPNE6-219ENST00000560884 TM4SF1P30408 202 aa17.27■□□□□ 0.36
CPNE6-219ENST00000560884 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
CPNE6-219ENST00000560884 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
CPNE6-219ENST00000560884 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
CPNE6-219ENST00000560884 NUP98P52948 1817 aa17.26■□□□□ 0.35
CPNE6-219ENST00000560884 ARFGEF1Q9Y6D6 1849 aa17.26■□□□□ 0.35
CPNE6-219ENST00000560884 A0A087WZG4 1122 aa17.26■□□□□ 0.35
CPNE6-219ENST00000560884 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
CPNE6-219ENST00000560884 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
CPNE6-219ENST00000560884 PARP3Q9Y6F1 533 aa17.26■□□□□ 0.35
CPNE6-219ENST00000560884 DCAF8L1A6NGE4 600 aa17.25■□□□□ 0.35
CPNE6-219ENST00000560884 APAF1O14727 1248 aa17.25■□□□□ 0.35
CPNE6-219ENST00000560884 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
CPNE6-219ENST00000560884 NFIXQ14938 502 aa17.25■□□□□ 0.35
CPNE6-219ENST00000560884 COL11A2P13942 1736 aaPredicted RBP17.24■□□□□ 0.35
CPNE6-219ENST00000560884 CAMTA2O94983 1202 aa17.24■□□□□ 0.35
CPNE6-219ENST00000560884 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
CPNE6-219ENST00000560884 TBC1D2BQ9UPU7 963 aa17.24■□□□□ 0.35
CPNE6-219ENST00000560884 ZNF330Q9Y3S2 320 aaPredicted RBP17.24■□□□□ 0.35
CPNE6-219ENST00000560884 CHL1O00533 1208 aa17.23■□□□□ 0.35
CPNE6-219ENST00000560884 GPR162Q16538 588 aa17.22■□□□□ 0.35
CPNE6-219ENST00000560884 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
CPNE6-219ENST00000560884 ANKRD36CQ5JPF3 1778 aa17.22■□□□□ 0.35
CPNE6-219ENST00000560884 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.35
CPNE6-219ENST00000560884 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
CPNE6-219ENST00000560884 TGFB2P61812 414 aa17.2■□□□□ 0.34
CPNE6-219ENST00000560884 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
CPNE6-219ENST00000560884 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
CPNE6-219ENST00000560884 ZNF853P0CG23 659 aa17.19■□□□□ 0.34
CPNE6-219ENST00000560884 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
CPNE6-219ENST00000560884 ARFGEF2Q9Y6D5 1785 aa17.18■□□□□ 0.34
CPNE6-219ENST00000560884 RGL2O15211 777 aa17.18■□□□□ 0.34
CPNE6-219ENST00000560884 SERPINB2P05120 415 aa17.18■□□□□ 0.34
CPNE6-219ENST00000560884 KCNA3P22001 575 aa17.18■□□□□ 0.34
CPNE6-219ENST00000560884 KRT24Q2M2I5 525 aa17.18■□□□□ 0.34
CPNE6-219ENST00000560884 LRP10Q7Z4F1 713 aa17.18■□□□□ 0.34
CPNE6-219ENST00000560884 A0A0G2JLW4 131 aa17.17■□□□□ 0.34
CPNE6-219ENST00000560884 DPEP1P16444 411 aa17.17■□□□□ 0.34
CPNE6-219ENST00000560884 CACNA1SQ13698 1873 aa17.17■□□□□ 0.34
CPNE6-219ENST00000560884 BICDL1Q6ZP65 573 aa17.17■□□□□ 0.34
CPNE6-219ENST00000560884 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
CPNE6-219ENST00000560884 WWC3Q9ULE0 1092 aa17.17■□□□□ 0.34
CPNE6-219ENST00000560884 YY1P25490 414 aa17.16■□□□□ 0.34
CPNE6-219ENST00000560884 PDIA6Q15084 440 aa17.16■□□□□ 0.34
CPNE6-219ENST00000560884 CLEC4GQ6UXB4 293 aa17.16■□□□□ 0.34
CPNE6-219ENST00000560884 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
CPNE6-219ENST00000560884 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
CPNE6-219ENST00000560884 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
CPNE6-219ENST00000560884 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms