RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
IRF9-211ENST00000560852 LAS1LQ9Y4W2 734 aaKnown RBP15.7■□□□□ 0.1
IRF9-211ENST00000560852 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
IRF9-211ENST00000560852 TJP1Q07157 1748 aa15.69■□□□□ 0.1
IRF9-211ENST00000560852 VAMP4O75379 141 aa15.69■□□□□ 0.1
IRF9-211ENST00000560852 SSFA2P28290 1259 aa15.69■□□□□ 0.1
IRF9-211ENST00000560852 IL6STP40189 918 aaPredicted RBP15.69■□□□□ 0.1
IRF9-211ENST00000560852 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
IRF9-211ENST00000560852 KCNQ4P56696 695 aa15.69■□□□□ 0.1
IRF9-211ENST00000560852 LRP10Q7Z4F1 713 aa15.69■□□□□ 0.1
IRF9-211ENST00000560852 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
IRF9-211ENST00000560852 ANO8Q9HCE9 1232 aaPredicted RBP15.69■□□□□ 0.1
IRF9-211ENST00000560852 CCDC87Q9NVE4 849 aa15.69■□□□□ 0.1
IRF9-211ENST00000560852 NUP188Q5SRE5 1749 aa15.68■□□□□ 0.1
IRF9-211ENST00000560852 PRAMEF22A3QJZ6 481 aa15.68■□□□□ 0.1
IRF9-211ENST00000560852 PDIA6Q15084 440 aa15.68■□□□□ 0.1
IRF9-211ENST00000560852 ZNF827Q17R98 1081 aa15.68■□□□□ 0.1
IRF9-211ENST00000560852 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
IRF9-211ENST00000560852 STK32BQ9NY57 414 aa15.68■□□□□ 0.1
IRF9-211ENST00000560852 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
IRF9-211ENST00000560852 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
IRF9-211ENST00000560852 TAF1LQ8IZX4 1826 aa15.66■□□□□ 0.1
IRF9-211ENST00000560852 C4BP0C0L5 1744 aa15.66■□□□□ 0.1
IRF9-211ENST00000560852 NBPF26B4DH59 902 aa15.66■□□□□ 0.1
IRF9-211ENST00000560852 EXOSC9Q06265 439 aaKnown RBP15.66■□□□□ 0.1
IRF9-211ENST00000560852 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
IRF9-211ENST00000560852 TWISTNBQ3B726 338 aaPredicted RBP15.66■□□□□ 0.1
IRF9-211ENST00000560852 NBPF10Q6P3W6 841 aaKnown RBP15.66■□□□□ 0.1
IRF9-211ENST00000560852 NBPF15Q8N660 670 aa15.66■□□□□ 0.1
IRF9-211ENST00000560852 TSPYL6Q8N831 410 aa15.66■□□□□ 0.1
IRF9-211ENST00000560852 SLC16A10Q8TF71 515 aa15.66■□□□□ 0.1
IRF9-211ENST00000560852 DDX21Q9NR30 783 aaKnown RBP eCLIP15.66■□□□□ 0.1
IRF9-211ENST00000560852 RTCBQ9Y3I0 505 aaKnown RBP15.66■□□□□ 0.1
IRF9-211ENST00000560852 A1BGP04217 495 aa15.65■□□□□ 0.1
IRF9-211ENST00000560852 BRPF1P55201 1214 aaPredicted RBP15.65■□□□□ 0.1
IRF9-211ENST00000560852 AK7Q96M32 723 aa15.65■□□□□ 0.1
IRF9-211ENST00000560852 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
IRF9-211ENST00000560852 ZBTB1Q9Y2K1 713 aa15.65■□□□□ 0.1
IRF9-211ENST00000560852 A0A087WZG4 1122 aa15.64■□□□□ 0.09
IRF9-211ENST00000560852 CCDC30Q5VVM6 783 aa15.64■□□□□ 0.09
IRF9-211ENST00000560852 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
IRF9-211ENST00000560852 TRAPPC3LQ5T215 181 aa15.63■□□□□ 0.09
IRF9-211ENST00000560852 HDGFL1Q5TGJ6 251 aa15.63■□□□□ 0.09
IRF9-211ENST00000560852 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
IRF9-211ENST00000560852 TFCP2L1Q9NZI6 479 aa15.63■□□□□ 0.09
IRF9-211ENST00000560852 QSER1Q2KHR3 1735 aa15.63■□□□□ 0.09
IRF9-211ENST00000560852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.62■□□□□ 0.09
IRF9-211ENST00000560852 GNPATO15228 680 aa15.62■□□□□ 0.09
IRF9-211ENST00000560852 ARHGEF1Q92888 912 aaKnown RBP15.62■□□□□ 0.09
IRF9-211ENST00000560852 HYPKQ9NX55 129 aa15.62■□□□□ 0.09
IRF9-211ENST00000560852 ERVV-1B6SEH8 477 aa15.61■□□□□ 0.09
IRF9-211ENST00000560852 ALDH1L2Q3SY69 923 aa15.61■□□□□ 0.09
IRF9-211ENST00000560852 COL23A1Q86Y22 540 aaPredicted RBP15.61■□□□□ 0.09
IRF9-211ENST00000560852 NARFQ9UHQ1 456 aa15.61■□□□□ 0.09
IRF9-211ENST00000560852 MYH14Q7Z406 1995 aaKnown RBP15.61■□□□□ 0.09
IRF9-211ENST00000560852 LAMB4A4D0S4 1761 aa15.6■□□□□ 0.09
IRF9-211ENST00000560852 EIF2S2P20042 333 aaKnown RBP15.6■□□□□ 0.09
IRF9-211ENST00000560852 CLEC4GQ6UXB4 293 aa15.6■□□□□ 0.09
IRF9-211ENST00000560852 ELL2O00472 640 aaPredicted RBP15.59■□□□□ 0.09
IRF9-211ENST00000560852 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
IRF9-211ENST00000560852 COL15A1P39059 1388 aa15.59■□□□□ 0.09
IRF9-211ENST00000560852 UBR3Q6ZT12 1888 aa15.59■□□□□ 0.09
IRF9-211ENST00000560852 R3HDM1Q15032 1099 aaKnown RBP15.58■□□□□ 0.08
IRF9-211ENST00000560852 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
IRF9-211ENST00000560852 USP42Q9H9J4 1324 aaKnown RBP15.58■□□□□ 0.08
IRF9-211ENST00000560852 CAMTA2O94983 1202 aa15.57■□□□□ 0.08
IRF9-211ENST00000560852 PROSER3Q2NL68 480 aa15.57■□□□□ 0.08
IRF9-211ENST00000560852 NLGN1Q8N2Q7 840 aa15.57■□□□□ 0.08
IRF9-211ENST00000560852 GYS1P13807 737 aa15.56■□□□□ 0.08
IRF9-211ENST00000560852 RFC4P35249 363 aa15.56■□□□□ 0.08
IRF9-211ENST00000560852 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
IRF9-211ENST00000560852 MTFR1LQ9H019 292 aa15.56■□□□□ 0.08
IRF9-211ENST00000560852 BCL2L12Q9HB09 334 aa15.56■□□□□ 0.08
IRF9-211ENST00000560852 MAP3K15Q6ZN16 1313 aa15.55■□□□□ 0.08
IRF9-211ENST00000560852 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
IRF9-211ENST00000560852 TM4SF1P30408 202 aa15.55■□□□□ 0.08
IRF9-211ENST00000560852 RARSP54136 660 aaKnown RBP15.55■□□□□ 0.08
IRF9-211ENST00000560852 COPS6Q7L5N1 327 aa15.55■□□□□ 0.08
IRF9-211ENST00000560852 DZIP3Q86Y13 1208 aaKnown RBP15.55■□□□□ 0.08
IRF9-211ENST00000560852 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
IRF9-211ENST00000560852 IBTKQ9P2D0 1353 aaPredicted RBP15.54■□□□□ 0.08
IRF9-211ENST00000560852 TRIM28Q13263 835 aaKnown RBP15.54■□□□□ 0.08
IRF9-211ENST00000560852 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
IRF9-211ENST00000560852 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
IRF9-211ENST00000560852 PLBD2Q8NHP8 589 aa15.54■□□□□ 0.08
IRF9-211ENST00000560852 SSH1Q8WYL5 1049 aa15.54■□□□□ 0.08
IRF9-211ENST00000560852 PDGFDQ9GZP0 370 aaPredicted RBP15.54■□□□□ 0.08
IRF9-211ENST00000560852 CASZ1Q86V15 1759 aa15.54■□□□□ 0.08
IRF9-211ENST00000560852 ZPR1O75312 459 aa15.53■□□□□ 0.08
IRF9-211ENST00000560852 MYL6BP14649 208 aa15.53■□□□□ 0.08
IRF9-211ENST00000560852 GIGYF2Q6Y7W6 1299 aaKnown RBP15.53■□□□□ 0.08
IRF9-211ENST00000560852 TTLL7Q6ZT98 887 aa15.53■□□□□ 0.08
IRF9-211ENST00000560852 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
IRF9-211ENST00000560852 XAGE3Q8WTP9 111 aa15.53■□□□□ 0.08
IRF9-211ENST00000560852 ARHGAP45Q92619 1136 aa15.53■□□□□ 0.08
IRF9-211ENST00000560852 COL24A1Q17RW2 1714 aa15.52■□□□□ 0.08
IRF9-211ENST00000560852 PHF14O94880 888 aa15.52■□□□□ 0.08
IRF9-211ENST00000560852 PIP4K2AP48426 406 aaPredicted RBP15.52■□□□□ 0.08
IRF9-211ENST00000560852 USPL1Q5W0Q7 1092 aa15.52■□□□□ 0.08
IRF9-211ENST00000560852 SMIM5Q71RC9 77 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms