RNA–Protein interactions for RNA: ENST00000560529.1

AP3B2-213, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 3

Gene AP3B2, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-213ENST00000560529 USP42Q9H9J4 1324 aaKnown RBP25.55■■□□□ 1.68
AP3B2-213ENST00000560529 CANXP27824 592 aaKnown RBP25.54■■□□□ 1.68
AP3B2-213ENST00000560529 CD2APQ9Y5K6 639 aa25.54■■□□□ 1.68
AP3B2-213ENST00000560529 CCDC146Q8IYE0 955 aa25.53■■□□□ 1.68
AP3B2-213ENST00000560529 THUMPD2Q9BTF0 503 aaKnown RBP25.53■■□□□ 1.68
AP3B2-213ENST00000560529 COL15A1P39059 1388 aa25.53■■□□□ 1.68
AP3B2-213ENST00000560529 DLG5Q8TDM6 1919 aa25.53■■□□□ 1.68
AP3B2-213ENST00000560529 MIS18AQ9NYP9 233 aa25.52■■□□□ 1.68
AP3B2-213ENST00000560529 ZPR1O75312 459 aa25.51■■□□□ 1.67
AP3B2-213ENST00000560529 RIPK4P57078 832 aa25.51■■□□□ 1.67
AP3B2-213ENST00000560529 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
AP3B2-213ENST00000560529 FKBP8Q14318 412 aa25.5■■□□□ 1.67
AP3B2-213ENST00000560529 GPR162Q16538 588 aa25.5■■□□□ 1.67
AP3B2-213ENST00000560529 ADAMTS8Q9UP79 889 aa25.5■■□□□ 1.67
AP3B2-213ENST00000560529 TMPOP42166 694 aaKnown RBP25.49■■□□□ 1.67
AP3B2-213ENST00000560529 USPL1Q5W0Q7 1092 aa25.49■■□□□ 1.67
AP3B2-213ENST00000560529 UTRNP46939 3433 aa25.49■■□□□ 1.67
AP3B2-213ENST00000560529 PRAMEF22A3QJZ6 481 aa25.48■■□□□ 1.67
AP3B2-213ENST00000560529 SNRPA1P09661 255 aaKnown RBP25.48■■□□□ 1.67
AP3B2-213ENST00000560529 PNISRQ8TF01 805 aaKnown RBP25.48■■□□□ 1.67
AP3B2-213ENST00000560529 RUNDC1Q96C34 613 aa25.48■■□□□ 1.67
AP3B2-213ENST00000560529 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
AP3B2-213ENST00000560529 PARP3Q9Y6F1 533 aa25.48■■□□□ 1.67
AP3B2-213ENST00000560529 A1BGP04217 495 aa25.47■■□□□ 1.67
AP3B2-213ENST00000560529 EIF5P55010 431 aaKnown RBP25.47■■□□□ 1.67
AP3B2-213ENST00000560529 NARFQ9UHQ1 456 aa25.47■■□□□ 1.67
AP3B2-213ENST00000560529 ZNF330Q9Y3S2 320 aaPredicted RBP25.47■■□□□ 1.67
AP3B2-213ENST00000560529 USP16Q9Y5T5 823 aa25.47■■□□□ 1.67
AP3B2-213ENST00000560529 NEUROD2Q15784 382 aa25.46■■□□□ 1.67
AP3B2-213ENST00000560529 LMOD3Q0VAK6 560 aa25.45■■□□□ 1.66
AP3B2-213ENST00000560529 GOLGB1Q14789 3259 aaKnown RBP25.45■■□□□ 1.66
AP3B2-213ENST00000560529 A0A087WZG4 1122 aa25.44■■□□□ 1.66
AP3B2-213ENST00000560529 IL6STP40189 918 aaPredicted RBP25.44■■□□□ 1.66
AP3B2-213ENST00000560529 DDR1Q08345 913 aa25.43■■□□□ 1.66
AP3B2-213ENST00000560529 NPM2Q86SE8 214 aaKnown RBP25.43■■□□□ 1.66
AP3B2-213ENST00000560529 YY1P25490 414 aa25.42■■□□□ 1.66
AP3B2-213ENST00000560529 PIP4K2AP48426 406 aaPredicted RBP25.42■■□□□ 1.66
AP3B2-213ENST00000560529 C10orf71Q711Q0 1435 aa25.42■■□□□ 1.66
AP3B2-213ENST00000560529 KDM3BQ7LBC6 1761 aa25.41■■□□□ 1.66
AP3B2-213ENST00000560529 ANP32CO43423 234 aa25.41■■□□□ 1.66
AP3B2-213ENST00000560529 BCL2L12Q9HB09 334 aa25.41■■□□□ 1.66
AP3B2-213ENST00000560529 YBX3P16989 372 aaKnown RBP eCLIP25.4■■□□□ 1.66
AP3B2-213ENST00000560529 TM4SF1P30408 202 aa25.4■■□□□ 1.66
AP3B2-213ENST00000560529 EIF4A1P60842 406 aaKnown RBP25.4■■□□□ 1.66
AP3B2-213ENST00000560529 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
AP3B2-213ENST00000560529 TSPYL4Q9UJ04 414 aa25.4■■□□□ 1.66
AP3B2-213ENST00000560529 WWC3Q9ULE0 1092 aa25.4■■□□□ 1.66
AP3B2-213ENST00000560529 TBC1D2BQ9UPU7 963 aa25.4■■□□□ 1.66
AP3B2-213ENST00000560529 POLRMTO00411 1230 aaKnown RBP25.39■■□□□ 1.66
AP3B2-213ENST00000560529 NFIXQ14938 502 aa25.39■■□□□ 1.66
AP3B2-213ENST00000560529 PXDNLA1KZ92 1463 aa25.37■■□□□ 1.65
AP3B2-213ENST00000560529 GIGYF1O75420 1035 aaPredicted RBP25.37■■□□□ 1.65
AP3B2-213ENST00000560529 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
AP3B2-213ENST00000560529 GRIN3BO60391 1043 aa25.36■■□□□ 1.65
AP3B2-213ENST00000560529 TGFB2P61812 414 aa25.36■■□□□ 1.65
AP3B2-213ENST00000560529 NBPF26B4DH59 902 aa25.35■■□□□ 1.65
AP3B2-213ENST00000560529 NBPF10Q6P3W6 841 aaKnown RBP25.35■■□□□ 1.65
AP3B2-213ENST00000560529 BICDL1Q6ZP65 573 aa25.35■■□□□ 1.65
AP3B2-213ENST00000560529 DZIP3Q86Y13 1208 aaKnown RBP25.35■■□□□ 1.65
AP3B2-213ENST00000560529 NBPF15Q8N660 670 aa25.35■■□□□ 1.65
AP3B2-213ENST00000560529 KIF13BQ9NQT8 1826 aa25.35■■□□□ 1.65
AP3B2-213ENST00000560529 SCN7AQ01118 1682 aa25.34■■□□□ 1.65
AP3B2-213ENST00000560529 A0A0G2JLW4 131 aa25.34■■□□□ 1.65
AP3B2-213ENST00000560529 BABAM1Q9NWV8 329 aa25.34■■□□□ 1.65
AP3B2-213ENST00000560529 APAF1O14727 1248 aa25.33■■□□□ 1.65
AP3B2-213ENST00000560529 CAMTA2O94983 1202 aa25.33■■□□□ 1.65
AP3B2-213ENST00000560529 LAMB4A4D0S4 1761 aa25.33■■□□□ 1.65
AP3B2-213ENST00000560529 SERPINB2P05120 415 aa25.32■■□□□ 1.64
AP3B2-213ENST00000560529 DPEP1P16444 411 aa25.32■■□□□ 1.64
AP3B2-213ENST00000560529 TBC1D9BQ66K14 1250 aa25.32■■□□□ 1.64
AP3B2-213ENST00000560529 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
AP3B2-213ENST00000560529 LAS1LQ9Y4W2 734 aaKnown RBP25.31■■□□□ 1.64
AP3B2-213ENST00000560529 KIAA1551Q9HCM1 1747 aa25.31■■□□□ 1.64
AP3B2-213ENST00000560529 N4BP2Q86UW6 1770 aaPredicted RBP25.29■■□□□ 1.64
AP3B2-213ENST00000560529 CHL1O00533 1208 aa25.28■■□□□ 1.64
AP3B2-213ENST00000560529 NGEFQ8N5V2 710 aa25.27■■□□□ 1.64
AP3B2-213ENST00000560529 BCS1LQ9Y276 419 aa25.27■■□□□ 1.64
AP3B2-213ENST00000560529 CARMIL3Q8ND23 1372 aa25.27■■□□□ 1.64
AP3B2-213ENST00000560529 BCORQ6W2J9 1755 aa25.26■■□□□ 1.63
AP3B2-213ENST00000560529 MYL6BP14649 208 aa25.26■■□□□ 1.63
AP3B2-213ENST00000560529 KCNA3P22001 575 aa25.26■■□□□ 1.63
AP3B2-213ENST00000560529 CHRNA5P30532 468 aa25.26■■□□□ 1.63
AP3B2-213ENST00000560529 SETDB2Q96T68 719 aa25.26■■□□□ 1.63
AP3B2-213ENST00000560529 ZNF652Q9Y2D9 606 aa25.26■■□□□ 1.63
AP3B2-213ENST00000560529 NRXN2Q9P2S2 1712 aa25.26■■□□□ 1.63
AP3B2-213ENST00000560529 AFDNP55196 1824 aaKnown RBP25.26■■□□□ 1.63
AP3B2-213ENST00000560529 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
AP3B2-213ENST00000560529 CHD4Q14839 1912 aa25.25■■□□□ 1.63
AP3B2-213ENST00000560529 CLEC4GQ6UXB4 293 aa25.24■■□□□ 1.63
AP3B2-213ENST00000560529 ERBB4Q15303 1308 aa25.23■■□□□ 1.63
AP3B2-213ENST00000560529 KRT24Q2M2I5 525 aa25.23■■□□□ 1.63
AP3B2-213ENST00000560529 CFAP44Q96MT7 982 aa25.23■■□□□ 1.63
AP3B2-213ENST00000560529 PIM2Q9P1W9 311 aa25.23■■□□□ 1.63
AP3B2-213ENST00000560529 SENP3-EIF4A1A0A087X0R7 540 aa25.21■■□□□ 1.63
AP3B2-213ENST00000560529 NPHP1O15259 732 aa25.21■■□□□ 1.63
AP3B2-213ENST00000560529 PRR5LQ6MZQ0 368 aa25.21■■□□□ 1.63
AP3B2-213ENST00000560529 CCDC24Q8N4L8 307 aa25.21■■□□□ 1.63
AP3B2-213ENST00000560529 RGL2O15211 777 aa25.2■■□□□ 1.62
AP3B2-213ENST00000560529 CALD1Q05682 793 aaKnown RBP25.2■■□□□ 1.62
AP3B2-213ENST00000560529 HLFQ16534 295 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms