RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 PCDHGC4Q9Y5F7 938 aa10.04□□□□□ -0.8
CRNDE-208ENST00000560029 ARAFP10398 606 aa10.03□□□□□ -0.8
CRNDE-208ENST00000560029 ATP4AP20648 1035 aa10.03□□□□□ -0.8
CRNDE-208ENST00000560029 SCNN1DP51172 638 aa10.03□□□□□ -0.8
CRNDE-208ENST00000560029 ERICH6Q7L0X2 663 aa10.03□□□□□ -0.8
CRNDE-208ENST00000560029 ATXN7O15265 892 aaPredicted RBP10.02□□□□□ -0.81
CRNDE-208ENST00000560029 DOC2BQ14184 412 aa10.02□□□□□ -0.81
CRNDE-208ENST00000560029 MCM6Q14566 821 aa10.02□□□□□ -0.81
CRNDE-208ENST00000560029 CHSY3Q70JA7 882 aa10.02□□□□□ -0.81
CRNDE-208ENST00000560029 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
CRNDE-208ENST00000560029 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
CRNDE-208ENST00000560029 ITGB7P26010 798 aa10.01□□□□□ -0.81
CRNDE-208ENST00000560029 GDF10P55107 478 aa10.01□□□□□ -0.81
CRNDE-208ENST00000560029 ARSJQ5FYB0 599 aaPredicted RBP10.01□□□□□ -0.81
CRNDE-208ENST00000560029 FIGNL1Q6PIW4 674 aa10.01□□□□□ -0.81
CRNDE-208ENST00000560029 A0A1W2PNR3 127 aa10□□□□□ -0.81
CRNDE-208ENST00000560029 SOCS7O14512 581 aa10□□□□□ -0.81
CRNDE-208ENST00000560029 KHNYNO15037 678 aaKnown RBP10□□□□□ -0.81
CRNDE-208ENST00000560029 INHAP05111 366 aa10□□□□□ -0.81
CRNDE-208ENST00000560029 EIF4G2P78344 907 aaKnown RBP eCLIP10□□□□□ -0.81
CRNDE-208ENST00000560029 SEMA6BQ9H3T3 888 aa10□□□□□ -0.81
CRNDE-208ENST00000560029 APBB1O00213 710 aa9.99□□□□□ -0.81
CRNDE-208ENST00000560029 PIK3R2O00459 728 aa9.99□□□□□ -0.81
CRNDE-208ENST00000560029 PCBP4P57723 403 aaKnown RBP9.99□□□□□ -0.81
CRNDE-208ENST00000560029 TNP2Q05952 138 aa9.99□□□□□ -0.81
CRNDE-208ENST00000560029 VAC14Q08AM6 782 aa9.99□□□□□ -0.81
CRNDE-208ENST00000560029 IRF5Q13568 498 aa9.99□□□□□ -0.81
CRNDE-208ENST00000560029 FCHSD1Q86WN1 690 aa9.99□□□□□ -0.81
CRNDE-208ENST00000560029 NIFKQ9BYG3 293 aaKnown RBP9.99□□□□□ -0.81
CRNDE-208ENST00000560029 NLRP8Q86W28 1048 aa9.98□□□□□ -0.81
CRNDE-208ENST00000560029 KRTAP4-8Q9BYQ9 185 aa9.98□□□□□ -0.81
CRNDE-208ENST00000560029 ADH6P28332 368 aa9.97□□□□□ -0.81
CRNDE-208ENST00000560029 SMTNP53814 917 aa9.97□□□□□ -0.81
CRNDE-208ENST00000560029 NOP53Q9NZM5 478 aaKnown RBP9.97□□□□□ -0.81
CRNDE-208ENST00000560029 USP3Q9Y6I4 520 aa9.97□□□□□ -0.81
CRNDE-208ENST00000560029 TRIM11Q96F44 468 aa9.96□□□□□ -0.82
CRNDE-208ENST00000560029 PARP3Q9Y6F1 533 aa9.96□□□□□ -0.82
CRNDE-208ENST00000560029 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
CRNDE-208ENST00000560029 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
CRNDE-208ENST00000560029 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
CRNDE-208ENST00000560029 CHIC2Q9UKJ5 165 aa9.95□□□□□ -0.82
CRNDE-208ENST00000560029 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
CRNDE-208ENST00000560029 C1orf216Q8TAB5 229 aa9.94□□□□□ -0.82
CRNDE-208ENST00000560029 CLUAP1Q96AJ1 413 aa9.94□□□□□ -0.82
CRNDE-208ENST00000560029 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
CRNDE-208ENST00000560029 ZIC5Q96T25 663 aa9.94□□□□□ -0.82
CRNDE-208ENST00000560029 ZMYND15Q9H091 742 aa9.94□□□□□ -0.82
CRNDE-208ENST00000560029 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
CRNDE-208ENST00000560029 CABP1Q9NZU7 370 aa9.93□□□□□ -0.82
CRNDE-208ENST00000560029 TMEM229AB2RXF0 380 aa9.92□□□□□ -0.82
CRNDE-208ENST00000560029 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
CRNDE-208ENST00000560029 PLPP7Q8NBV4 271 aa9.92□□□□□ -0.82
CRNDE-208ENST00000560029 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
CRNDE-208ENST00000560029 GJA3Q9Y6H8 435 aa9.92□□□□□ -0.82
CRNDE-208ENST00000560029 TATP17735 454 aaPredicted RBP9.91□□□□□ -0.82
CRNDE-208ENST00000560029 GATA4P43694 442 aa9.91□□□□□ -0.82
CRNDE-208ENST00000560029 FAM182BQ5T319 152 aa9.91□□□□□ -0.82
CRNDE-208ENST00000560029 PSMG3-AS1Q96PY0 264 aa9.91□□□□□ -0.82
CRNDE-208ENST00000560029 GDPD2Q9HCC8 539 aa9.91□□□□□ -0.82
CRNDE-208ENST00000560029 IQSEC3Q9UPP2 1182 aaPredicted RBP9.91□□□□□ -0.82
CRNDE-208ENST00000560029 A6NJY4 79 aa9.9□□□□□ -0.82
CRNDE-208ENST00000560029 ABL2P42684 1182 aa9.9□□□□□ -0.82
CRNDE-208ENST00000560029 ZNF468Q5VIY5 522 aaPredicted RBP9.9□□□□□ -0.82
CRNDE-208ENST00000560029 BICDL1Q6ZP65 573 aa9.9□□□□□ -0.82
CRNDE-208ENST00000560029 CDK2AP1O14519 115 aa9.89□□□□□ -0.83
CRNDE-208ENST00000560029 ZMYM1Q5SVZ6 1142 aa9.89□□□□□ -0.83
CRNDE-208ENST00000560029 MARK1Q9P0L2 795 aa9.89□□□□□ -0.83
CRNDE-208ENST00000560029 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
CRNDE-208ENST00000560029 RAD21O60216 631 aa9.88□□□□□ -0.83
CRNDE-208ENST00000560029 TXLNAP40222 546 aa9.88□□□□□ -0.83
CRNDE-208ENST00000560029 SLC4A9Q96Q91 983 aa9.88□□□□□ -0.83
CRNDE-208ENST00000560029 PRM3Q9NNZ6 103 aa9.88□□□□□ -0.83
CRNDE-208ENST00000560029 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
CRNDE-208ENST00000560029 FAM157BP0CG42 384 aa9.87□□□□□ -0.83
CRNDE-208ENST00000560029 MAP7D1Q3KQU3 841 aa9.87□□□□□ -0.83
CRNDE-208ENST00000560029 AVENQ9NQS1 362 aaPredicted RBP9.87□□□□□ -0.83
CRNDE-208ENST00000560029 PIK3CDO00329 1044 aa9.86□□□□□ -0.83
CRNDE-208ENST00000560029 SPATA31C1P0DKV0 1188 aa9.86□□□□□ -0.83
CRNDE-208ENST00000560029 MTFR1Q15390 333 aa9.86□□□□□ -0.83
CRNDE-208ENST00000560029 SYT9Q86SS6 491 aa9.86□□□□□ -0.83
CRNDE-208ENST00000560029 ZDHHC3Q9NYG2 299 aa9.86□□□□□ -0.83
CRNDE-208ENST00000560029 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.85□□□□□ -0.83
CRNDE-208ENST00000560029 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
CRNDE-208ENST00000560029 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
CRNDE-208ENST00000560029 LRRC69Q6ZNQ3 347 aa9.85□□□□□ -0.83
CRNDE-208ENST00000560029 PCDHGA11Q9Y5H2 935 aa9.85□□□□□ -0.83
CRNDE-208ENST00000560029 ELOA3CA0A087WX78 387 aaPredicted RBP9.84□□□□□ -0.83
CRNDE-208ENST00000560029 A6NJR5 290 aa9.84□□□□□ -0.83
CRNDE-208ENST00000560029 ELOA3DA6NLF2 546 aaPredicted RBP9.84□□□□□ -0.83
CRNDE-208ENST00000560029 EFSO43281 561 aa9.84□□□□□ -0.83
CRNDE-208ENST00000560029 RSPO4Q2I0M5 234 aaPredicted RBP9.84□□□□□ -0.83
CRNDE-208ENST00000560029 ELOA3BQ3SY89 546 aa9.84□□□□□ -0.83
CRNDE-208ENST00000560029 TBCELQ5QJ74 424 aa9.84□□□□□ -0.83
CRNDE-208ENST00000560029 C8orf86Q6ZUL3 223 aa9.84□□□□□ -0.83
CRNDE-208ENST00000560029 ELOA3Q8NG57 546 aa9.84□□□□□ -0.83
CRNDE-208ENST00000560029 ZDHHC1Q8WTX9 485 aa9.84□□□□□ -0.83
CRNDE-208ENST00000560029 ALAS2P22557 587 aa9.83□□□□□ -0.84
CRNDE-208ENST00000560029 FOXD4L6Q3SYB3 417 aaPredicted RBP9.83□□□□□ -0.84
CRNDE-208ENST00000560029 FOXD4L3Q6VB84 417 aaPredicted RBP9.83□□□□□ -0.84
CRNDE-208ENST00000560029 PROSER2Q86WR7 435 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms