RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
SEMA4B-214ENST00000560003 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 IL6STP40189 918 aaPredicted RBP11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 TSPYL4Q9UJ04 414 aa11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 C4BP0C0L5 1744 aa11.8□□□□□ -0.52
SEMA4B-214ENST00000560003 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
SEMA4B-214ENST00000560003 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
SEMA4B-214ENST00000560003 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
SEMA4B-214ENST00000560003 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
SEMA4B-214ENST00000560003 SOS1Q07889 1333 aaPredicted RBP11.79□□□□□ -0.52
SEMA4B-214ENST00000560003 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
SEMA4B-214ENST00000560003 ZNF831Q5JPB2 1677 aa11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 APAF1O14727 1248 aa11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 KCNQ3O43525 872 aa11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 EIF5P55010 431 aaKnown RBP11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 AMIGO3Q86WK7 504 aa11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 RRP7AQ9Y3A4 280 aaKnown RBP11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 C5P01031 1676 aa11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
SEMA4B-214ENST00000560003 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
SEMA4B-214ENST00000560003 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 MMP10P09238 476 aa11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 GYS1P13807 737 aa11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 EIF4A1P60842 406 aaKnown RBP11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 NGEFQ8N5V2 710 aa11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 THUMPD2Q9BTF0 503 aaKnown RBP11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
SEMA4B-214ENST00000560003 CHL1O00533 1208 aa11.76□□□□□ -0.53
SEMA4B-214ENST00000560003 RGL2O15211 777 aa11.76□□□□□ -0.53
SEMA4B-214ENST00000560003 A1BGP04217 495 aa11.76□□□□□ -0.53
SEMA4B-214ENST00000560003 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
SEMA4B-214ENST00000560003 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
SEMA4B-214ENST00000560003 LAS1LQ9Y4W2 734 aaKnown RBP11.76□□□□□ -0.53
SEMA4B-214ENST00000560003 KCPQ6ZWJ8 1503 aa11.76□□□□□ -0.53
SEMA4B-214ENST00000560003 QSER1Q2KHR3 1735 aa11.75□□□□□ -0.53
SEMA4B-214ENST00000560003 GNAI1P63096 354 aa11.75□□□□□ -0.53
SEMA4B-214ENST00000560003 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
SEMA4B-214ENST00000560003 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
SEMA4B-214ENST00000560003 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
SEMA4B-214ENST00000560003 ZNF330Q9Y3S2 320 aaPredicted RBP11.75□□□□□ -0.53
SEMA4B-214ENST00000560003 TGFB2P61812 414 aa11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 GPR162Q16538 588 aa11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 IFT57Q9NWB7 429 aa11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 COL15A1P39059 1388 aa11.74□□□□□ -0.53
SEMA4B-214ENST00000560003 GRIN3BO60391 1043 aa11.73□□□□□ -0.53
SEMA4B-214ENST00000560003 HOXB7P09629 217 aa11.73□□□□□ -0.53
SEMA4B-214ENST00000560003 TM4SF1P30408 202 aa11.73□□□□□ -0.53
SEMA4B-214ENST00000560003 CCDC184Q52MB2 194 aa11.73□□□□□ -0.53
SEMA4B-214ENST00000560003 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
SEMA4B-214ENST00000560003 SETDB2Q96T68 719 aa11.73□□□□□ -0.53
SEMA4B-214ENST00000560003 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
SEMA4B-214ENST00000560003 KIF6Q6ZMV9 814 aa11.72□□□□□ -0.53
SEMA4B-214ENST00000560003 FAM9BQ8IZU0 186 aa11.72□□□□□ -0.53
SEMA4B-214ENST00000560003 TBC1D2BQ9UPU7 963 aa11.72□□□□□ -0.53
SEMA4B-214ENST00000560003 CCER2I3L3R5 266 aa11.71□□□□□ -0.53
SEMA4B-214ENST00000560003 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
SEMA4B-214ENST00000560003 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
SEMA4B-214ENST00000560003 PRAMEF22A3QJZ6 481 aa11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 ERVV-1B6SEH8 477 aa11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 NPHP1O15259 732 aa11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 EIF2S2P20042 333 aaKnown RBP11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 NFIXQ14938 502 aa11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 WDR63Q8IWG1 891 aa11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 WWC1Q8IX03 1113 aa11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 CICQ96RK0 1608 aaPredicted RBP11.7□□□□□ -0.54
SEMA4B-214ENST00000560003 IL16Q14005 1332 aa11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 SERPINB2P05120 415 aa11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 ZNF853P0CG23 659 aa11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 UBR3Q6ZT12 1888 aa11.69□□□□□ -0.54
SEMA4B-214ENST00000560003 CAMTA2O94983 1202 aa11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 MYL6BP14649 208 aa11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 MBIPQ9NS73 344 aa11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 COL5A3P25940 1745 aaPredicted RBP11.68□□□□□ -0.54
SEMA4B-214ENST00000560003 PDE6BP35913 854 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 ST5P78524 1137 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 DDR1Q08345 913 aa11.67□□□□□ -0.54
SEMA4B-214ENST00000560003 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms