RNA–Protein interactions for RNA: ENST00000559848.1

WDR61-209, Transcript of WD repeat domain 61, human

TSL 3

Gene WDR61, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR61-209	ENST00000559848	CNTNAP4	Q9C0A0	1308 aa		12.54	□□□□□ -0.4
WDR61-209	ENST00000559848	TUBGCP6	Q96RT7	1819 aa		12.53	□□□□□ -0.4
WDR61-209	ENST00000559848	RPS6KA4	O75676	772 aa		12.53	□□□□□ -0.4
WDR61-209	ENST00000559848	STARD3NL	O95772	234 aa		12.53	□□□□□ -0.4
WDR61-209	ENST00000559848	SNRPA1	P09661	255 aa	Known RBP	12.53	□□□□□ -0.4
WDR61-209	ENST00000559848	TRAPPC3L	Q5T215	181 aa		12.53	□□□□□ -0.4
WDR61-209	ENST00000559848	RC3H1	Q5TC82	1133 aa	Known RBP	12.53	□□□□□ -0.4
WDR61-209	ENST00000559848	SRP68	Q9UHB9	627 aa	Known RBP	12.53	□□□□□ -0.4
WDR61-209	ENST00000559848	CHL1	O00533	1208 aa		12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	EIF2S2	P20042	333 aa	Known RBP	12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	SSFA2	P28290	1259 aa		12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	WWC1	Q8IX03	1113 aa		12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	ARHGEF1	Q92888	912 aa	Known RBP	12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	TSR2	Q969E8	191 aa	Known RBP	12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	SPON1	Q9HCB6	807 aa		12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	MBIP	Q9NS73	344 aa		12.52	□□□□□ -0.41
WDR61-209	ENST00000559848	CASZ1	Q86V15	1759 aa		12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	UBR2	Q8IWV8	1755 aa		12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	HMGB2	P26583	209 aa	Known RBP	12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	RFC4	P35249	363 aa		12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	NGEF	Q8N5V2	710 aa		12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	FLAD1	Q8NFF5	587 aa		12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	MTFR1L	Q9H019	292 aa		12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	COL5A3	P25940	1745 aa	Predicted RBP	12.51	□□□□□ -0.41
WDR61-209	ENST00000559848	ELL2	O00472	640 aa	Predicted RBP	12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	GIGYF1	O75420	1035 aa	Predicted RBP	12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	GNAI1	P63096	354 aa		12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	KLHL34	Q8N239	644 aa		12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	CFAP44	Q96MT7	982 aa		12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	SOS1	Q07889	1333 aa	Predicted RBP	12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	MYH14	Q7Z406	1995 aa	Known RBP	12.5	□□□□□ -0.41
WDR61-209	ENST00000559848	UBR3	Q6ZT12	1888 aa		12.49	□□□□□ -0.41
WDR61-209	ENST00000559848	KDM3B	Q7LBC6	1761 aa		12.49	□□□□□ -0.41
WDR61-209	ENST00000559848	ANXA1	P04083	346 aa		12.49	□□□□□ -0.41
WDR61-209	ENST00000559848	MYL6B	P14649	208 aa		12.49	□□□□□ -0.41
WDR61-209	ENST00000559848	PTGER2	P43116	358 aa		12.49	□□□□□ -0.41
WDR61-209	ENST00000559848	CALD1	Q05682	793 aa	Known RBP	12.49	□□□□□ -0.41
WDR61-209	ENST00000559848	IFT57	Q9NWB7	429 aa		12.49	□□□□□ -0.41
WDR61-209	ENST00000559848	COL15A1	P39059	1388 aa		12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	ZNF853	P0CG23	659 aa		12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	CCDC27	Q2M243	656 aa		12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	SLC16A10	Q8TF71	515 aa		12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	BABAM1	Q9NWV8	329 aa		12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	TBC1D2B	Q9UPU7	963 aa		12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	ZNF831	Q5JPB2	1677 aa		12.48	□□□□□ -0.41
WDR61-209	ENST00000559848	NBPF26	B4DH59	902 aa		12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	ZPR1	O75312	459 aa		12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	POLD1	P28340	1107 aa		12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	DUSP27	Q5VZP5	1158 aa		12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	USPL1	Q5W0Q7	1092 aa		12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	NBPF10	Q6P3W6	841 aa	Known RBP	12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	NPM2	Q86SE8	214 aa	Known RBP	12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	NBPF15	Q8N660	670 aa		12.47	□□□□□ -0.41
WDR61-209	ENST00000559848	TCERG1	O14776	1098 aa	Known RBP	12.46	□□□□□ -0.41
WDR61-209	ENST00000559848	GYS1	P13807	737 aa		12.46	□□□□□ -0.41
WDR61-209	ENST00000559848	EIF5	P55010	431 aa	Known RBP	12.46	□□□□□ -0.41
WDR61-209	ENST00000559848	FKBP8	Q14318	412 aa		12.46	□□□□□ -0.41
WDR61-209	ENST00000559848	PROSER3	Q2NL68	480 aa		12.46	□□□□□ -0.41
WDR61-209	ENST00000559848	C8orf58	Q8NAV2	365 aa		12.46	□□□□□ -0.41
WDR61-209	ENST00000559848	QSER1	Q2KHR3	1735 aa		12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	CIC	Q96RK0	1608 aa	Predicted RBP	12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	USP42	Q9H9J4	1324 aa	Known RBP	12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	IL6ST	P40189	918 aa	Predicted RBP	12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	BICDL1	Q6ZP65	573 aa		12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	WDR63	Q8IWG1	891 aa		12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	TSPYL6	Q8N831	410 aa		12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	SGIP1	Q9BQI5	828 aa		12.45	□□□□□ -0.42
WDR61-209	ENST00000559848	FANCI	Q9NVI1	1328 aa		12.44	□□□□□ -0.42
WDR61-209	ENST00000559848	MMP10	P09238	476 aa		12.44	□□□□□ -0.42
WDR61-209	ENST00000559848	HDGFL1	Q5TGJ6	251 aa		12.44	□□□□□ -0.42
WDR61-209	ENST00000559848	TTLL7	Q6ZT98	887 aa		12.44	□□□□□ -0.42
WDR61-209	ENST00000559848	DZIP3	Q86Y13	1208 aa	Known RBP	12.44	□□□□□ -0.42
WDR61-209	ENST00000559848	BCL2L12	Q9HB09	334 aa		12.44	□□□□□ -0.42
WDR61-209	ENST00000559848	NARF	Q9UHQ1	456 aa		12.44	□□□□□ -0.42
WDR61-209	ENST00000559848	IL16	Q14005	1332 aa		12.43	□□□□□ -0.42
WDR61-209	ENST00000559848		A0A087WZG4	1122 aa		12.43	□□□□□ -0.42
WDR61-209	ENST00000559848	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
WDR61-209	ENST00000559848	AIMP1	Q12904	312 aa	Known RBP	12.43	□□□□□ -0.42
WDR61-209	ENST00000559848	CHPF2	Q9P2E5	772 aa		12.43	□□□□□ -0.42
WDR61-209	ENST00000559848	C4A	P0C0L4	1744 aa		12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	CAMTA2	O94983	1202 aa		12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	EXOSC9	Q06265	439 aa	Known RBP	12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	PDIA6	Q15084	440 aa		12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	NLGN1	Q8N2Q7	840 aa		12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	CDCA7L	Q96GN5	454 aa		12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	ZBTB3	Q9H5J0	574 aa		12.42	□□□□□ -0.42
WDR61-209	ENST00000559848	LRP5	O75197	1615 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	FAM177B	A6PVY3	158 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	DDR1	Q08345	913 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	GOLGA2	Q08379	1002 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	HLF	Q16534	295 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	TBC1D9B	Q66K14	1250 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	XAGE3	Q8WTP9	111 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	ZNF428	Q96B54	188 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	PARP3	Q9Y6F1	533 aa		12.41	□□□□□ -0.42
WDR61-209	ENST00000559848	LAMB4	A4D0S4	1761 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms