RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ATXN7L1Q9ULK2 861 aaPredicted RBP7.89□□□□□ -1.15
SPG11-218ENST00000559754 ATP4AP20648 1035 aa7.88□□□□□ -1.15
SPG11-218ENST00000559754 RASA1P20936 1047 aa7.88□□□□□ -1.15
SPG11-218ENST00000559754 FOXK2Q01167 660 aa7.88□□□□□ -1.15
SPG11-218ENST00000559754 ARSJQ5FYB0 599 aaPredicted RBP7.88□□□□□ -1.15
SPG11-218ENST00000559754 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
SPG11-218ENST00000559754 ADAMTS8Q9UP79 889 aa7.88□□□□□ -1.15
SPG11-218ENST00000559754 KIAA1024Q9UPX6 916 aa7.88□□□□□ -1.15
SPG11-218ENST00000559754 CHMP3Q9Y3E7 222 aa7.88□□□□□ -1.15
SPG11-218ENST00000559754 RNF225M0QZC1 329 aaPredicted RBP7.87□□□□□ -1.15
SPG11-218ENST00000559754 ARHGEF15O94989 841 aa7.87□□□□□ -1.15
SPG11-218ENST00000559754 CELA2BP08218 269 aaPredicted RBP7.87□□□□□ -1.15
SPG11-218ENST00000559754 EPHA4P54764 986 aa7.87□□□□□ -1.15
SPG11-218ENST00000559754 UBAP2LQ14157 1087 aaKnown RBP7.87□□□□□ -1.15
SPG11-218ENST00000559754 TEAD4Q15561 434 aa7.87□□□□□ -1.15
SPG11-218ENST00000559754 LARP1Q6PKG0 1096 aaKnown RBP7.87□□□□□ -1.15
SPG11-218ENST00000559754 LYPD4Q6UWN0 246 aa7.87□□□□□ -1.15
SPG11-218ENST00000559754 WHAMMQ8TF30 809 aa7.87□□□□□ -1.15
SPG11-218ENST00000559754 USP3Q9Y6I4 520 aa7.87□□□□□ -1.15
SPG11-218ENST00000559754 A0A1W2PNR3 127 aa7.86□□□□□ -1.15
SPG11-218ENST00000559754 NOS2P35228 1153 aa7.86□□□□□ -1.15
SPG11-218ENST00000559754 TNS4Q8IZW8 715 aa7.86□□□□□ -1.15
SPG11-218ENST00000559754 L3MBTL2Q969R5 705 aa7.86□□□□□ -1.15
SPG11-218ENST00000559754 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
SPG11-218ENST00000559754 LRRC4BQ9NT99 713 aa7.86□□□□□ -1.15
SPG11-218ENST00000559754 PCDHGC4Q9Y5F7 938 aa7.86□□□□□ -1.15
SPG11-218ENST00000559754 GPC6Q9Y625 555 aaPredicted RBP7.86□□□□□ -1.15
SPG11-218ENST00000559754 GJA3Q9Y6H8 435 aa7.86□□□□□ -1.15
SPG11-218ENST00000559754 SERTM1A2A2V5 107 aa7.85□□□□□ -1.15
SPG11-218ENST00000559754 FGFR3P22607 806 aa7.85□□□□□ -1.15
SPG11-218ENST00000559754 MARSP56192 900 aaKnown RBP7.85□□□□□ -1.15
SPG11-218ENST00000559754 PSMA6P60900 246 aaKnown RBP7.85□□□□□ -1.15
SPG11-218ENST00000559754 BICDL1Q6ZP65 573 aa7.85□□□□□ -1.15
SPG11-218ENST00000559754 ZCCHC2Q9C0B9 1178 aaKnown RBP7.85□□□□□ -1.15
SPG11-218ENST00000559754 NDFIP2Q9NV92 336 aa7.85□□□□□ -1.15
SPG11-218ENST00000559754 ZNF777Q9ULD5 760 aaPredicted RBP7.85□□□□□ -1.15
SPG11-218ENST00000559754 ZNF232Q9UNY5 417 aa7.85□□□□□ -1.15
SPG11-218ENST00000559754 ATXN7O15265 892 aaPredicted RBP7.84□□□□□ -1.15
SPG11-218ENST00000559754 BCRP11274 1271 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 BMP4P12644 408 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 LMOD1P29536 600 aaPredicted RBP7.84□□□□□ -1.15
SPG11-218ENST00000559754 SEC13P55735 322 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 ZDHHC1Q8WTX9 485 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 ABHD17AQ96GS6 310 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 ZIC5Q96T25 663 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 VRTNQ9H8Y1 702 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 PARP3Q9Y6F1 533 aa7.84□□□□□ -1.15
SPG11-218ENST00000559754 BNIP3LO60238 219 aa7.83□□□□□ -1.16
SPG11-218ENST00000559754 TBCELQ5QJ74 424 aa7.83□□□□□ -1.16
SPG11-218ENST00000559754 KANK4Q5T7N3 995 aaPredicted RBP7.83□□□□□ -1.16
SPG11-218ENST00000559754 ACDQ96AP0 544 aa7.83□□□□□ -1.16
SPG11-218ENST00000559754 SCARF2Q96GP6 870 aaPredicted RBP7.83□□□□□ -1.16
SPG11-218ENST00000559754 OXCT2Q9BYC2 517 aaPredicted RBP7.83□□□□□ -1.16
SPG11-218ENST00000559754 NEUROD4Q9HD90 331 aa7.83□□□□□ -1.16
SPG11-218ENST00000559754 GDF2Q9UK05 429 aaPredicted RBP7.83□□□□□ -1.16
SPG11-218ENST00000559754 FAM196BA6NMK8 535 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 SFI1A8K8P3 1242 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 EML1O00423 815 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 DKK1O94907 266 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 TXLNAP40222 546 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 KCNMA1Q12791 1236 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 SAMD5Q5TGI4 173 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 GAS2L2Q8NHY3 880 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 KLRG1Q96E93 195 aa7.82□□□□□ -1.16
SPG11-218ENST00000559754 TSPAN10Q9H1Z9 355 aaPredicted RBP7.82□□□□□ -1.16
SPG11-218ENST00000559754 FAM157BP0CG42 384 aa7.81□□□□□ -1.16
SPG11-218ENST00000559754 HIRAP54198 1017 aaPredicted RBP7.81□□□□□ -1.16
SPG11-218ENST00000559754 PTK7Q13308 1070 aa7.81□□□□□ -1.16
SPG11-218ENST00000559754 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
SPG11-218ENST00000559754 GOLGA6L1Q8N7Z2 621 aa7.81□□□□□ -1.16
SPG11-218ENST00000559754 TSEN2Q8NCE0 465 aaKnown RBP7.81□□□□□ -1.16
SPG11-218ENST00000559754 NEDD1Q8NHV4 660 aa7.81□□□□□ -1.16
SPG11-218ENST00000559754 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L10C9JJH3 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L21D6R901 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L18D6R9N7 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L22D6RA61 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L17D6RBQ6 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L19D6RCP7 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L20D6RJB6 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 OIP5O43482 229 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 PPP1R12BO60237 982 aaPredicted RBP7.8□□□□□ -1.16
SPG11-218ENST00000559754 MAPTP10636 758 aaKnown RBP7.8□□□□□ -1.16
SPG11-218ENST00000559754 USP17L24Q0WX57 530 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 CRTC2Q53ET0 693 aaPredicted RBP7.8□□□□□ -1.16
SPG11-218ENST00000559754 FAM182BQ5T319 152 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 STAG2Q8N3U4 1231 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 ZMYND15Q9H091 742 aa7.8□□□□□ -1.16
SPG11-218ENST00000559754 DCDC2BA2VCK2 349 aa7.79□□□□□ -1.16
SPG11-218ENST00000559754 KHNYNO15037 678 aaKnown RBP7.79□□□□□ -1.16
SPG11-218ENST00000559754 CTBSQ01459 385 aa7.79□□□□□ -1.16
SPG11-218ENST00000559754 TNP2Q05952 138 aa7.79□□□□□ -1.16
SPG11-218ENST00000559754 DPYDQ12882 1025 aa7.79□□□□□ -1.16
SPG11-218ENST00000559754 LAMC2Q13753 1193 aa7.79□□□□□ -1.16
SPG11-218ENST00000559754 CFAP70Q5T0N1 1121 aa7.79□□□□□ -1.16
SPG11-218ENST00000559754 POTEAQ6S8J7 498 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms