RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
SNRPA1-208ENST00000559686 ST20-MTHFSA0A0A6YYL1 179 aa12.53□□□□□ -0.4
SNRPA1-208ENST00000559686 PTCD1O75127 700 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-208ENST00000559686 RC3H1Q5TC82 1133 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-208ENST00000559686 PUS7Q96PZ0 661 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-208ENST00000559686 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
SNRPA1-208ENST00000559686 LMNB1P20700 586 aa12.52□□□□□ -0.41
SNRPA1-208ENST00000559686 TESK2Q96S53 571 aa12.52□□□□□ -0.41
SNRPA1-208ENST00000559686 EYA1Q99502 592 aa12.52□□□□□ -0.41
SNRPA1-208ENST00000559686 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
SNRPA1-208ENST00000559686 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-208ENST00000559686 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-208ENST00000559686 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-208ENST00000559686 POTECB2RU33 542 aa12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 AIDAQ96BJ3 306 aa12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 USP42Q9H9J4 1324 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 KDM6AO15550 1401 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 NCAPD2Q15021 1401 aa12.5□□□□□ -0.41
SNRPA1-208ENST00000559686 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
SNRPA1-208ENST00000559686 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
SNRPA1-208ENST00000559686 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
SNRPA1-208ENST00000559686 CABP4P57796 275 aa12.49□□□□□ -0.41
SNRPA1-208ENST00000559686 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
SNRPA1-208ENST00000559686 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 TJP1Q07157 1748 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 TONSLQ96HA7 1378 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 NFKBIEO00221 500 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 LBX1P52954 281 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 USPL1Q5W0Q7 1092 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 PRDM10Q9NQV6 1147 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
SNRPA1-208ENST00000559686 TM4SF1P30408 202 aa12.47□□□□□ -0.41
SNRPA1-208ENST00000559686 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
SNRPA1-208ENST00000559686 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
SNRPA1-208ENST00000559686 C2CD5Q86YS7 1000 aa12.47□□□□□ -0.41
SNRPA1-208ENST00000559686 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
SNRPA1-208ENST00000559686 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.41
SNRPA1-208ENST00000559686 ZPR1O75312 459 aa12.46□□□□□ -0.41
SNRPA1-208ENST00000559686 VEGFBP49765 207 aa12.46□□□□□ -0.41
SNRPA1-208ENST00000559686 TTLL6Q8N841 843 aa12.46□□□□□ -0.41
SNRPA1-208ENST00000559686 ABHD8Q96I13 439 aa12.46□□□□□ -0.41
SNRPA1-208ENST00000559686 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
SNRPA1-208ENST00000559686 CACNA1SQ13698 1873 aa12.45□□□□□ -0.42
SNRPA1-208ENST00000559686 TNNT2P45379 298 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-208ENST00000559686 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
SNRPA1-208ENST00000559686 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-208ENST00000559686 CARMIL3Q8ND23 1372 aa12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 WASHC2AQ641Q2 1341 aa12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 CCDC85CA6NKD9 419 aa12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 DDNO94850 711 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 NFIXQ14938 502 aa12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 DICER1Q9UPY3 1922 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-208ENST00000559686 NRXN2Q9P2S2 1712 aa12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 H0YIN7 160 aa12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 C21orf2O43822 256 aa12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 SERPINB2P05120 415 aa12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
SNRPA1-208ENST00000559686 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.429e-8■□□□□ 9.2
SNRPA1-208ENST00000559686 MTHFSP49914 203 aa12.42□□□□□ -0.42
SNRPA1-208ENST00000559686 MLLT1Q03111 559 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-208ENST00000559686 DNAJC10Q8IXB1 793 aa12.42□□□□□ -0.42
SNRPA1-208ENST00000559686 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
SNRPA1-208ENST00000559686 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-208ENST00000559686 PLEKHO1Q53GL0 409 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-208ENST00000559686 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-208ENST00000559686 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-208ENST00000559686 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
SNRPA1-208ENST00000559686 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
SNRPA1-208ENST00000559686 SOS1Q07889 1333 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-208ENST00000559686 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.42
SNRPA1-208ENST00000559686 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
SNRPA1-208ENST00000559686 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-208ENST00000559686 C1orf141Q5JVX7 400 aa12.4□□□□□ -0.42
SNRPA1-208ENST00000559686 WBP1LQ9NX94 342 aa12.4□□□□□ -0.42
SNRPA1-208ENST00000559686 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
SNRPA1-208ENST00000559686 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
SNRPA1-208ENST00000559686 PCDH10Q9P2E7 1040 aa12.39□□□□□ -0.43
SNRPA1-208ENST00000559686 COL15A1P39059 1388 aa12.39□□□□□ -0.43
SNRPA1-208ENST00000559686 PASKQ96RG2 1323 aa12.38□□□□□ -0.43
SNRPA1-208ENST00000559686 GRM1Q13255 1194 aa12.38□□□□□ -0.43
SNRPA1-208ENST00000559686 LDHDQ86WU2 507 aa12.38□□□□□ -0.43
SNRPA1-208ENST00000559686 NARFQ9UHQ1 456 aa12.38□□□□□ -0.43
SNRPA1-208ENST00000559686 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
SNRPA1-208ENST00000559686 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
SNRPA1-208ENST00000559686 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
SNRPA1-208ENST00000559686 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
SNRPA1-208ENST00000559686 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
SNRPA1-208ENST00000559686 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms