RNA–Protein interactions for RNA: ENST00000559274.1

MARK3-218, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-218ENST00000559274 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
MARK3-218ENST00000559274 TGFB2P61812 414 aa12.29□□□□□ -0.44
MARK3-218ENST00000559274 MSL1Q68DK7 614 aa12.29□□□□□ -0.44
MARK3-218ENST00000559274 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
MARK3-218ENST00000559274 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
MARK3-218ENST00000559274 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
MARK3-218ENST00000559274 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
MARK3-218ENST00000559274 ZNF790Q6PG37 636 aa12.28□□□□□ -0.44
MARK3-218ENST00000559274 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
MARK3-218ENST00000559274 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
MARK3-218ENST00000559274 MMP10P09238 476 aa12.27□□□□□ -0.45
MARK3-218ENST00000559274 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.45
MARK3-218ENST00000559274 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
MARK3-218ENST00000559274 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
MARK3-218ENST00000559274 CYP19A1P11511 503 aaPredicted RBP12.25□□□□□ -0.45
MARK3-218ENST00000559274 TAF7Q15545 349 aaPredicted RBP12.25□□□□□ -0.45
MARK3-218ENST00000559274 IL17REQ8NFR9 667 aa12.25□□□□□ -0.45
MARK3-218ENST00000559274 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
MARK3-218ENST00000559274 MRC1P22897 1456 aa12.25□□□□□ -0.45
MARK3-218ENST00000559274 SNRPA1P09661 255 aaKnown RBP12.24□□□□□ -0.45
MARK3-218ENST00000559274 GYS1P13807 737 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 DDX10Q13206 875 aaKnown RBP12.24□□□□□ -0.45
MARK3-218ENST00000559274 SLC39A6Q13433 755 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
MARK3-218ENST00000559274 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 MYBBP1AQ9BQG0 1328 aaKnown RBP12.24□□□□□ -0.45
MARK3-218ENST00000559274 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
MARK3-218ENST00000559274 NARFQ9UHQ1 456 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 SCN11AQ9UI33 1791 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
MARK3-218ENST00000559274 RGL2O15211 777 aa12.23□□□□□ -0.45
MARK3-218ENST00000559274 IL6STP40189 918 aaPredicted RBP12.23□□□□□ -0.45
MARK3-218ENST00000559274 INTS5Q6P9B9 1019 aaKnown RBP12.23□□□□□ -0.45
MARK3-218ENST00000559274 PHACTR3Q96KR7 559 aa12.23□□□□□ -0.45
MARK3-218ENST00000559274 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
MARK3-218ENST00000559274 BABAM1Q9NWV8 329 aa12.23□□□□□ -0.45
MARK3-218ENST00000559274 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
MARK3-218ENST00000559274 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
MARK3-218ENST00000559274 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
MARK3-218ENST00000559274 NPHP1O15259 732 aa12.22□□□□□ -0.45
MARK3-218ENST00000559274 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
MARK3-218ENST00000559274 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.45
MARK3-218ENST00000559274 NFE2L2Q16236 605 aa12.21□□□□□ -0.45
MARK3-218ENST00000559274 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.45
MARK3-218ENST00000559274 ZNF496Q96IT1 587 aaPredicted RBP12.21□□□□□ -0.45
MARK3-218ENST00000559274 COL15A1P39059 1388 aa12.2□□□□□ -0.46
MARK3-218ENST00000559274 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
MARK3-218ENST00000559274 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
MARK3-218ENST00000559274 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
MARK3-218ENST00000559274 TUBGCP6Q96RT7 1819 aa12.2□□□□□ -0.46
MARK3-218ENST00000559274 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
MARK3-218ENST00000559274 EIF5P55010 431 aaKnown RBP12.19□□□□□ -0.46
MARK3-218ENST00000559274 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
MARK3-218ENST00000559274 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
MARK3-218ENST00000559274 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
MARK3-218ENST00000559274 MCM10Q7L590 875 aa12.18□□□□□ -0.46
MARK3-218ENST00000559274 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
MARK3-218ENST00000559274 ZBTB1Q9Y2K1 713 aa12.18□□□□□ -0.46
MARK3-218ENST00000559274 ZNF330Q9Y3S2 320 aaPredicted RBP12.18□□□□□ -0.46
MARK3-218ENST00000559274 ADAMTS7Q9UKP4 1686 aa12.18□□□□□ -0.46
MARK3-218ENST00000559274 TM4SF1P30408 202 aa12.17□□□□□ -0.46
MARK3-218ENST00000559274 PDE6BP35913 854 aa12.17□□□□□ -0.46
MARK3-218ENST00000559274 RIPK4P57078 832 aa12.17□□□□□ -0.46
MARK3-218ENST00000559274 FKBP8Q14318 412 aa12.17□□□□□ -0.46
MARK3-218ENST00000559274 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
MARK3-218ENST00000559274 ZNF784Q8NCA9 323 aaPredicted RBP12.17□□□□□ -0.46
MARK3-218ENST00000559274 CHD4Q14839 1912 aa12.17□□□□□ -0.46
MARK3-218ENST00000559274 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
MARK3-218ENST00000559274 H0YIN7 160 aa12.16□□□□□ -0.46
MARK3-218ENST00000559274 ST5P78524 1137 aa12.16□□□□□ -0.46
MARK3-218ENST00000559274 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
MARK3-218ENST00000559274 PLEKHF1Q96S99 279 aa12.16□□□□□ -0.46
MARK3-218ENST00000559274 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
MARK3-218ENST00000559274 BCS1LQ9Y276 419 aa12.16□□□□□ -0.46
MARK3-218ENST00000559274 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
MARK3-218ENST00000559274 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
MARK3-218ENST00000559274 POLRMTO00411 1230 aaKnown RBP12.15□□□□□ -0.46
MARK3-218ENST00000559274 SERPINB2P05120 415 aa12.15□□□□□ -0.46
MARK3-218ENST00000559274 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
MARK3-218ENST00000559274 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
MARK3-218ENST00000559274 KCPQ6ZWJ8 1503 aa12.15□□□□□ -0.46
MARK3-218ENST00000559274 CARMIL3Q8ND23 1372 aa12.15□□□□□ -0.46
MARK3-218ENST00000559274 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
MARK3-218ENST00000559274 YBX3P16989 372 aaKnown RBP eCLIP12.14□□□□□ -0.473e-7■□□□□ 9.4
MARK3-218ENST00000559274 NFIXQ14938 502 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 TPTE2Q6XPS3 522 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 ARHGAP27Q6ZUM4 889 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 BRIP1Q9BX63 1249 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
MARK3-218ENST00000559274 TSPYL4Q9UJ04 414 aa12.14□□□□□ -0.47
MARK3-218ENST00000559274 DPEP1P16444 411 aa12.13□□□□□ -0.47
MARK3-218ENST00000559274 GTF2E1P29083 439 aaPredicted RBP12.13□□□□□ -0.47
MARK3-218ENST00000559274 TTLL6Q8N841 843 aa12.13□□□□□ -0.47
MARK3-218ENST00000559274 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
MARK3-218ENST00000559274 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms