RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 VSIG10Q8N0Z9 540 aa20.26■□□□□ 0.83
CDC42BPB-204ENST00000559043 LY75O60449 1722 aa20.25■□□□□ 0.83
CDC42BPB-204ENST00000559043 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
CDC42BPB-204ENST00000559043 CYP19A1P11511 503 aaPredicted RBP20.23■□□□□ 0.83
CDC42BPB-204ENST00000559043 PIP4K2AP48426 406 aaPredicted RBP20.23■□□□□ 0.83
CDC42BPB-204ENST00000559043 EN1Q05925 392 aaPredicted RBP20.23■□□□□ 0.83
CDC42BPB-204ENST00000559043 CCNL1Q9UK58 526 aaPredicted RBP20.23■□□□□ 0.83
CDC42BPB-204ENST00000559043 TJP1Q07157 1748 aa20.23■□□□□ 0.83
CDC42BPB-204ENST00000559043 HOXB7P09629 217 aa20.23■□□□□ 0.83
CDC42BPB-204ENST00000559043 TXNRD1Q16881 649 aa20.23■□□□□ 0.83
CDC42BPB-204ENST00000559043 A1BGP04217 495 aa20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 PDIA6Q15084 440 aa20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 LINC00116Q8NCU8 138 aa20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 UPF1Q92900 1129 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 CAMKK2Q96RR4 588 aa20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 BCL2L13Q9BXK5 485 aa20.22■□□□□ 0.83
CDC42BPB-204ENST00000559043 BCAR3O75815 825 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 HDGFL1Q5TGJ6 251 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 KDM2BQ8NHM5 1336 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 NBPF26B4DH59 902 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 ANXA1P04083 346 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 EZH2Q15910 746 aaKnown RBP20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 PROSER3Q2NL68 480 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 NBPF14Q5TI25 921 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 NBPF10Q6P3W6 841 aaKnown RBP20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 NBPF15Q8N660 670 aa20.21■□□□□ 0.83
CDC42BPB-204ENST00000559043 CT47B1P0C2W7 299 aaPredicted RBP20.2■□□□□ 0.82
CDC42BPB-204ENST00000559043 MS4A1P11836 297 aa20.2■□□□□ 0.82
CDC42BPB-204ENST00000559043 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
CDC42BPB-204ENST00000559043 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
CDC42BPB-204ENST00000559043 TEX13AQ9BXU3 409 aaPredicted RBP20.19■□□□□ 0.82
CDC42BPB-204ENST00000559043 CHPF2Q9P2E5 772 aa20.19■□□□□ 0.82
CDC42BPB-204ENST00000559043 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
CDC42BPB-204ENST00000559043 MYH14Q7Z406 1995 aaKnown RBP20.18■□□□□ 0.82
CDC42BPB-204ENST00000559043 LRP10Q7Z4F1 713 aa20.18■□□□□ 0.82
CDC42BPB-204ENST00000559043 STARD3NLO95772 234 aa20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 CRKLP46109 303 aaKnown RBP20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 G2E3Q7L622 706 aa20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 CCDC125Q86Z20 511 aa20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 CICQ96RK0 1608 aaPredicted RBP20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 SF3B2Q13435 895 aaKnown RBP20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
CDC42BPB-204ENST00000559043 TAF1LQ8IZX4 1826 aa20.16■□□□□ 0.82
CDC42BPB-204ENST00000559043 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
CDC42BPB-204ENST00000559043 AMIGO3Q86WK7 504 aa20.16■□□□□ 0.82
CDC42BPB-204ENST00000559043 ZBTB1Q9Y2K1 713 aa20.16■□□□□ 0.82
CDC42BPB-204ENST00000559043 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
CDC42BPB-204ENST00000559043 MYL6BP14649 208 aa20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 ALDH1L2Q3SY69 923 aa20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 CENPQQ7L2Z9 268 aaPredicted RBP20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 ZNF428Q96B54 188 aa20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 PHAXQ9H814 394 aaKnown RBP20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 BAG6P46379 1132 aa20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 DDX21Q9NR30 783 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDC42BPB-204ENST00000559043 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
CDC42BPB-204ENST00000559043 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
CDC42BPB-204ENST00000559043 CCDC87Q9NVE4 849 aa20.14■□□□□ 0.81
CDC42BPB-204ENST00000559043 DBF4Q9UBU7 674 aaPredicted RBP20.14■□□□□ 0.81
CDC42BPB-204ENST00000559043 RGPD3A6NKT7 1758 aaPredicted RBP20.13■□□□□ 0.81
CDC42BPB-204ENST00000559043 RGPD4Q7Z3J3 1758 aa20.13■□□□□ 0.81
CDC42BPB-204ENST00000559043 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
CDC42BPB-204ENST00000559043 STK31Q9BXU1 1019 aa20.12■□□□□ 0.81
CDC42BPB-204ENST00000559043 CNTNAP4Q9C0A0 1308 aa20.11■□□□□ 0.81
CDC42BPB-204ENST00000559043 BRPF1P55201 1214 aaPredicted RBP20.11■□□□□ 0.81
CDC42BPB-204ENST00000559043 C4BP0C0L5 1744 aa20.11■□□□□ 0.81
CDC42BPB-204ENST00000559043 PDE4AP27815 886 aa20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 ZNF827Q17R98 1081 aa20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 ERBB4Q15303 1308 aa20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 RREB1Q92766 1687 aa20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 EIF5P55010 431 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 BACH2Q9BYV9 841 aa20.1■□□□□ 0.81
CDC42BPB-204ENST00000559043 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
CDC42BPB-204ENST00000559043 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
CDC42BPB-204ENST00000559043 HYPKQ9NX55 129 aa20.09■□□□□ 0.81
CDC42BPB-204ENST00000559043 GNPATO15228 680 aa20.08■□□□□ 0.81
CDC42BPB-204ENST00000559043 AIMP1Q12904 312 aaKnown RBP20.08■□□□□ 0.81
CDC42BPB-204ENST00000559043 TTLL7Q6ZT98 887 aa20.08■□□□□ 0.81
CDC42BPB-204ENST00000559043 XAGE3Q8WTP9 111 aa20.08■□□□□ 0.81
CDC42BPB-204ENST00000559043 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.81
CDC42BPB-204ENST00000559043 RPS6KA4O75676 772 aa20.08■□□□□ 0.8
CDC42BPB-204ENST00000559043 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.8
CDC42BPB-204ENST00000559043 FLIIQ13045 1269 aa20.08■□□□□ 0.8
CDC42BPB-204ENST00000559043 CHMP4AQ9BY43 222 aa20.08■□□□□ 0.8
CDC42BPB-204ENST00000559043 ZNF330Q9Y3S2 320 aaPredicted RBP20.08■□□□□ 0.8
CDC42BPB-204ENST00000559043 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
CDC42BPB-204ENST00000559043 CACNA1FO60840 1977 aa20.07■□□□□ 0.8
CDC42BPB-204ENST00000559043 ANP32AP39687 249 aaKnown RBP20.06■□□□□ 0.8
CDC42BPB-204ENST00000559043 AK7Q96M32 723 aa20.05■□□□□ 0.8
CDC42BPB-204ENST00000559043 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
CDC42BPB-204ENST00000559043 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
CDC42BPB-204ENST00000559043 F6X3S4 739 aa20.04■□□□□ 0.8
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