RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ATP6V1AP38606 617 aa23.12■■□□□ 1.29
CLPX-203ENST00000558958 PDIA6Q15084 440 aa23.12■■□□□ 1.29
CLPX-203ENST00000558958 ERBB4Q15303 1308 aa23.12■■□□□ 1.29
CLPX-203ENST00000558958 STARD3NLO95772 234 aa23.11■■□□□ 1.29
CLPX-203ENST00000558958 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
CLPX-203ENST00000558958 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
CLPX-203ENST00000558958 TJP1Q07157 1748 aa23.11■■□□□ 1.29
CLPX-203ENST00000558958 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
CLPX-203ENST00000558958 IPO8O15397 1037 aaKnown RBP23.11■■□□□ 1.29
CLPX-203ENST00000558958 CYP19A1P11511 503 aaPredicted RBP23.11■■□□□ 1.29
CLPX-203ENST00000558958 PROSER3Q2NL68 480 aa23.11■■□□□ 1.29
CLPX-203ENST00000558958 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
CLPX-203ENST00000558958 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
CLPX-203ENST00000558958 ITPK1Q13572 414 aa23.1■■□□□ 1.29
CLPX-203ENST00000558958 ZKSCAN2Q63HK3 967 aa23.1■■□□□ 1.29
CLPX-203ENST00000558958 G2E3Q7L622 706 aa23.1■■□□□ 1.29
CLPX-203ENST00000558958 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
CLPX-203ENST00000558958 ANXA1P04083 346 aa23.09■■□□□ 1.29
CLPX-203ENST00000558958 HYPKQ9NX55 129 aa23.09■■□□□ 1.29
CLPX-203ENST00000558958 LY75O60449 1722 aa23.08■■□□□ 1.29
CLPX-203ENST00000558958 A1BGP04217 495 aa23.08■■□□□ 1.29
CLPX-203ENST00000558958 PTPRCP08575 1304 aa23.07■■□□□ 1.28
CLPX-203ENST00000558958 NBPF26B4DH59 902 aa23.07■■□□□ 1.28
CLPX-203ENST00000558958 FLIIQ13045 1269 aa23.07■■□□□ 1.28
CLPX-203ENST00000558958 NBPF14Q5TI25 921 aa23.07■■□□□ 1.28
CLPX-203ENST00000558958 NBPF10Q6P3W6 841 aaKnown RBP23.07■■□□□ 1.28
CLPX-203ENST00000558958 ATF7IPQ6VMQ6 1270 aa23.07■■□□□ 1.28
CLPX-203ENST00000558958 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
CLPX-203ENST00000558958 NBPF15Q8N660 670 aa23.07■■□□□ 1.28
CLPX-203ENST00000558958 PHAXQ9H814 394 aaKnown RBP23.07■■□□□ 1.28
CLPX-203ENST00000558958 TRIM27P14373 513 aa23.06■■□□□ 1.28
CLPX-203ENST00000558958 CCNL1Q9UK58 526 aaPredicted RBP23.06■■□□□ 1.28
CLPX-203ENST00000558958 PLSCR1O15162 318 aa23.05■■□□□ 1.28
CLPX-203ENST00000558958 APBA3O96018 575 aa23.05■■□□□ 1.28
CLPX-203ENST00000558958 MYL6BP14649 208 aa23.05■■□□□ 1.28
CLPX-203ENST00000558958 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
CLPX-203ENST00000558958 PDE3AQ14432 1141 aa23.05■■□□□ 1.28
CLPX-203ENST00000558958 KCNQ4P56696 695 aa23.05■■□□□ 1.28
CLPX-203ENST00000558958 C20orf194Q5TEA3 1177 aa23.05■■□□□ 1.28
CLPX-203ENST00000558958 TNNQ9UQP3 1299 aa23.05■■□□□ 1.28
CLPX-203ENST00000558958 TNS1Q9HBL0 1735 aaKnown RBP23.04■■□□□ 1.28
CLPX-203ENST00000558958 LINC00116Q8NCU8 138 aa23.04■■□□□ 1.28
CLPX-203ENST00000558958 API5Q9BZZ5 524 aaKnown RBP23.04■■□□□ 1.28
CLPX-203ENST00000558958 NEFLP07196 543 aa23.03■■□□□ 1.28
CLPX-203ENST00000558958 CRKLP46109 303 aaKnown RBP23.03■■□□□ 1.28
CLPX-203ENST00000558958 IRX6P78412 446 aaPredicted RBP23.03■■□□□ 1.28
CLPX-203ENST00000558958 FKBP5Q13451 457 aaPredicted RBP23.03■■□□□ 1.28
CLPX-203ENST00000558958 SLC27A3Q5K4L6 730 aa23.03■■□□□ 1.28
CLPX-203ENST00000558958 INTS5Q6P9B9 1019 aaKnown RBP23.03■■□□□ 1.28
CLPX-203ENST00000558958 CCDC87Q9NVE4 849 aa23.03■■□□□ 1.28
CLPX-203ENST00000558958 COL5A3P25940 1745 aaPredicted RBP23.03■■□□□ 1.28
CLPX-203ENST00000558958 MS4A1P11836 297 aa23.02■■□□□ 1.28
CLPX-203ENST00000558958 DZIP1LQ8IYY4 767 aaKnown RBP23.02■■□□□ 1.28
CLPX-203ENST00000558958 CLUAP1Q96AJ1 413 aa23.02■■□□□ 1.28
CLPX-203ENST00000558958 LRRC4BQ9NT99 713 aa23.02■■□□□ 1.28
CLPX-203ENST00000558958 ZBTB1Q9Y2K1 713 aa23.02■■□□□ 1.28
CLPX-203ENST00000558958 RLBP1P12271 317 aa23.01■■□□□ 1.27
CLPX-203ENST00000558958 PANK1Q8TE04 598 aa23.01■■□□□ 1.27
CLPX-203ENST00000558958 XAGE3Q8WTP9 111 aa23.01■■□□□ 1.27
CLPX-203ENST00000558958 COPS6Q7L5N1 327 aa23■■□□□ 1.27
CLPX-203ENST00000558958 FTSJ3Q8IY81 847 aaKnown RBP23■■□□□ 1.27
CLPX-203ENST00000558958 PROM2Q8N271 834 aa23■■□□□ 1.27
CLPX-203ENST00000558958 CNTNAP4Q9C0A0 1308 aa23■■□□□ 1.27
CLPX-203ENST00000558958 RREB1Q92766 1687 aa23■■□□□ 1.27
CLPX-203ENST00000558958 TXNRD1Q16881 649 aa22.99■■□□□ 1.27
CLPX-203ENST00000558958 ABCC4O15439 1325 aa22.99■■□□□ 1.27
CLPX-203ENST00000558958 IL6STP40189 918 aaPredicted RBP22.98■■□□□ 1.27
CLPX-203ENST00000558958 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
CLPX-203ENST00000558958 RC3H1Q5TC82 1133 aaKnown RBP22.98■■□□□ 1.27
CLPX-203ENST00000558958 MYH14Q7Z406 1995 aaKnown RBP22.98■■□□□ 1.27
CLPX-203ENST00000558958 TAF1LQ8IZX4 1826 aa22.97■■□□□ 1.27
CLPX-203ENST00000558958 PI4KAP2A4QPH2 592 aa22.97■■□□□ 1.27
CLPX-203ENST00000558958 F6X3S4 739 aa22.97■■□□□ 1.27
CLPX-203ENST00000558958 DDX58O95786 925 aaKnown RBP22.97■■□□□ 1.27
CLPX-203ENST00000558958 PI4KAP1Q8N8J0 262 aa22.97■■□□□ 1.27
CLPX-203ENST00000558958 ADCY9O60503 1353 aa22.96■■□□□ 1.27
CLPX-203ENST00000558958 RGPD3A6NKT7 1758 aaPredicted RBP22.96■■□□□ 1.27
CLPX-203ENST00000558958 RGPD4Q7Z3J3 1758 aa22.96■■□□□ 1.27
CLPX-203ENST00000558958 EIF5P55010 431 aaKnown RBP22.96■■□□□ 1.27
CLPX-203ENST00000558958 FKBP8Q14318 412 aa22.96■■□□□ 1.27
CLPX-203ENST00000558958 KSR2Q6VAB6 950 aa22.96■■□□□ 1.27
CLPX-203ENST00000558958 HMGB2P26583 209 aaKnown RBP22.95■■□□□ 1.26
CLPX-203ENST00000558958 TTLL7Q6ZT98 887 aa22.95■■□□□ 1.26
CLPX-203ENST00000558958 ANKRD13DQ6ZTN6 518 aa22.95■■□□□ 1.26
CLPX-203ENST00000558958 TMEM57Q8N5G2 664 aa22.95■■□□□ 1.26
CLPX-203ENST00000558958 ZNF330Q9Y3S2 320 aaPredicted RBP22.95■■□□□ 1.26
CLPX-203ENST00000558958 DNAAF4Q8WXU2 420 aa22.94■■□□□ 1.26
CLPX-203ENST00000558958 CRBNQ96SW2 442 aa22.94■■□□□ 1.26
CLPX-203ENST00000558958 COG6Q9Y2V7 657 aa22.94■■□□□ 1.26
CLPX-203ENST00000558958 SF3B2Q13435 895 aaKnown RBP22.93■■□□□ 1.26
CLPX-203ENST00000558958 INTS3Q68E01 1043 aaKnown RBP22.93■■□□□ 1.26
CLPX-203ENST00000558958 PLBD2Q8NHP8 589 aa22.93■■□□□ 1.26
CLPX-203ENST00000558958 CAMKK2Q96RR4 588 aa22.93■■□□□ 1.26
CLPX-203ENST00000558958 MAP3K2Q9Y2U5 619 aa22.93■■□□□ 1.26
CLPX-203ENST00000558958 C4BP0C0L5 1744 aa22.93■■□□□ 1.26
CLPX-203ENST00000558958 RPS6KA4O75676 772 aa22.92■■□□□ 1.26
CLPX-203ENST00000558958 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
CLPX-203ENST00000558958 SLC4A10Q6U841 1118 aa22.92■■□□□ 1.26
CLPX-203ENST00000558958 RIC3Q7Z5B4 369 aa22.92■■□□□ 1.26
CLPX-203ENST00000558958 CCDC125Q86Z20 511 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms