RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 LINC00116Q8NCU8 138 aa9.88□□□□□ -0.83
LRRC28-211ENST00000558890 CFAP44Q96MT7 982 aa9.88□□□□□ -0.83
LRRC28-211ENST00000558890 CHMP4AQ9BY43 222 aa9.88□□□□□ -0.83
LRRC28-211ENST00000558890 CCNL1Q9UK58 526 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-211ENST00000558890 CACNA1FO60840 1977 aa9.87□□□□□ -0.83
LRRC28-211ENST00000558890 E9PSI1 815 aa9.87□□□□□ -0.83
LRRC28-211ENST00000558890 ZNF853P0CG23 659 aa9.87□□□□□ -0.83
LRRC28-211ENST00000558890 TEFQ10587 303 aa9.87□□□□□ -0.83
LRRC28-211ENST00000558890 NBPF14Q5TI25 921 aa9.87□□□□□ -0.83
LRRC28-211ENST00000558890 EXOC6Q8TAG9 804 aa9.87□□□□□ -0.83
LRRC28-211ENST00000558890 CT47B1P0C2W7 299 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-211ENST00000558890 TAF7Q15545 349 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-211ENST00000558890 RC3H1Q5TC82 1133 aaKnown RBP9.86□□□□□ -0.83
LRRC28-211ENST00000558890 ZNF790Q6PG37 636 aa9.86□□□□□ -0.83
LRRC28-211ENST00000558890 ERICH6Q7L0X2 663 aa9.86□□□□□ -0.83
LRRC28-211ENST00000558890 TRMT2AQ8IZ69 625 aaKnown RBP9.86□□□□□ -0.83
LRRC28-211ENST00000558890 ZNF428Q96B54 188 aa9.86□□□□□ -0.83
LRRC28-211ENST00000558890 MYH16Q9H6N6 1097 aa9.86□□□□□ -0.83
LRRC28-211ENST00000558890 SPINK5Q9NQ38 1064 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-211ENST00000558890 HEG1Q9ULI3 1381 aa9.86□□□□□ -0.83
LRRC28-211ENST00000558890 PNPLA7Q6ZV29 1317 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 CHL1O00533 1208 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
LRRC28-211ENST00000558890 CAPN15O75808 1086 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 HOXB7P09629 217 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 SLFN5Q08AF3 891 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 SMIM5Q71RC9 77 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 ZNF496Q96IT1 587 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-211ENST00000558890 SGIP1Q9BQI5 828 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 THUMPD2Q9BTF0 503 aaKnown RBP9.85□□□□□ -0.83
LRRC28-211ENST00000558890 STK32BQ9NY57 414 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 C5P01031 1676 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 KCPQ6ZWJ8 1503 aa9.85□□□□□ -0.83
LRRC28-211ENST00000558890 INTS5Q6P9B9 1019 aaKnown RBP9.84□□□□□ -0.83
LRRC28-211ENST00000558890 COL23A1Q86Y22 540 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-211ENST00000558890 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
LRRC28-211ENST00000558890 ANP32EQ9BTT0 268 aa9.84□□□□□ -0.83
LRRC28-211ENST00000558890 MIS18AQ9NYP9 233 aa9.84□□□□□ -0.83
LRRC28-211ENST00000558890 RRP7AQ9Y3A4 280 aaKnown RBP9.84□□□□□ -0.83
LRRC28-211ENST00000558890 MYH14Q7Z406 1995 aaKnown RBP9.84□□□□□ -0.83
LRRC28-211ENST00000558890 COL5A3P25940 1745 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-211ENST00000558890 TCERG1O14776 1098 aaKnown RBP9.83□□□□□ -0.84
LRRC28-211ENST00000558890 CYP19A1P11511 503 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-211ENST00000558890 PTGER2P43116 358 aa9.83□□□□□ -0.84
LRRC28-211ENST00000558890 DNAJC10Q8IXB1 793 aa9.83□□□□□ -0.84
LRRC28-211ENST00000558890 CRBNQ96SW2 442 aa9.83□□□□□ -0.84
LRRC28-211ENST00000558890 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
LRRC28-211ENST00000558890 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-211ENST00000558890 TAF1LQ8IZX4 1826 aa9.82□□□□□ -0.84
LRRC28-211ENST00000558890 BTBD11A6QL63 1104 aa9.82□□□□□ -0.84
LRRC28-211ENST00000558890 CACNB1Q02641 598 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-211ENST00000558890 NEUROD2Q15784 382 aa9.82□□□□□ -0.84
LRRC28-211ENST00000558890 TJP1Q07157 1748 aa9.82□□□□□ -0.84
LRRC28-211ENST00000558890 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
LRRC28-211ENST00000558890 CASZ1Q86V15 1759 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 PRAMEF22A3QJZ6 481 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 PLIN1O60240 522 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 RPS6KA4O75676 772 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 CRKLP46109 303 aaKnown RBP9.81□□□□□ -0.84
LRRC28-211ENST00000558890 EIF4A1P60842 406 aaKnown RBP9.81□□□□□ -0.84
LRRC28-211ENST00000558890 TEX13AQ9BXU3 409 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-211ENST00000558890 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 USP16Q9Y5T5 823 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 QSER1Q2KHR3 1735 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 ERBB4Q15303 1308 aa9.81□□□□□ -0.84
LRRC28-211ENST00000558890 SSFA2P28290 1259 aa9.8□□□□□ -0.84
LRRC28-211ENST00000558890 ANP32AP39687 249 aaKnown RBP9.8□□□□□ -0.84
LRRC28-211ENST00000558890 TTC5Q8N0Z6 440 aa9.8□□□□□ -0.84
LRRC28-211ENST00000558890 SLC16A10Q8TF71 515 aa9.8□□□□□ -0.84
LRRC28-211ENST00000558890 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
LRRC28-211ENST00000558890 C4BP0C0L5 1744 aa9.79□□□□□ -0.84
LRRC28-211ENST00000558890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.79□□□□□ -0.84
LRRC28-211ENST00000558890 GIGYF1O75420 1035 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-211ENST00000558890 ZBTB7AO95365 584 aa9.79□□□□□ -0.84
LRRC28-211ENST00000558890 MS4A1P11836 297 aa9.79□□□□□ -0.84
LRRC28-211ENST00000558890 EIF5P55010 431 aaKnown RBP9.79□□□□□ -0.84
LRRC28-211ENST00000558890 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
LRRC28-211ENST00000558890 FMNL2Q96PY5 1086 aa9.79□□□□□ -0.84
LRRC28-211ENST00000558890 TSPYL4Q9UJ04 414 aa9.79□□□□□ -0.84
LRRC28-211ENST00000558890 UTRNP46939 3433 aa9.79□□□□□ -0.84
LRRC28-211ENST00000558890 TUBGCP6Q96RT7 1819 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 NBPF26B4DH59 902 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 A1BGP04217 495 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
LRRC28-211ENST00000558890 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-211ENST00000558890 NBPF10Q6P3W6 841 aaKnown RBP9.78□□□□□ -0.84
LRRC28-211ENST00000558890 LRP10Q7Z4F1 713 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 NBPF15Q8N660 670 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 MTFR1LQ9H019 292 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 CCDC87Q9NVE4 849 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 UBR3Q6ZT12 1888 aa9.78□□□□□ -0.84
LRRC28-211ENST00000558890 COL24A1Q17RW2 1714 aa9.77□□□□□ -0.85
LRRC28-211ENST00000558890 RGL2O15211 777 aa9.77□□□□□ -0.85
LRRC28-211ENST00000558890 GNPATO15228 680 aa9.77□□□□□ -0.85
LRRC28-211ENST00000558890 SNRPA1P09661 255 aaKnown RBP9.77□□□□□ -0.85
LRRC28-211ENST00000558890 PDIA6Q15084 440 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms