RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 RGS3P49796 1198 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 CCDC30Q5VVM6 783 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
SMAD3-207ENST00000558763 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 ITGB4P16144 1822 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 HOXB7P09629 217 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
SMAD3-207ENST00000558763 C5P01031 1676 aa16.36■□□□□ 0.21
SMAD3-207ENST00000558763 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
SMAD3-207ENST00000558763 C1orf115Q9H7X2 142 aa16.36■□□□□ 0.21
SMAD3-207ENST00000558763 FLIIQ13045 1269 aa16.35■□□□□ 0.21
SMAD3-207ENST00000558763 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
SMAD3-207ENST00000558763 C8orf34Q49A92 452 aa16.35■□□□□ 0.21
SMAD3-207ENST00000558763 KRT27Q7Z3Y8 459 aa16.35■□□□□ 0.21
SMAD3-207ENST00000558763 STK31Q9BXU1 1019 aa16.35■□□□□ 0.21
SMAD3-207ENST00000558763 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
SMAD3-207ENST00000558763 F6X3S4 739 aa16.34■□□□□ 0.21
SMAD3-207ENST00000558763 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
SMAD3-207ENST00000558763 HDGFL1Q5TGJ6 251 aa16.34■□□□□ 0.21
SMAD3-207ENST00000558763 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
SMAD3-207ENST00000558763 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
SMAD3-207ENST00000558763 SLC39A6Q13433 755 aa16.33■□□□□ 0.21
SMAD3-207ENST00000558763 PIGBQ92521 554 aa16.32■□□□□ 0.2
SMAD3-207ENST00000558763 BCL9O00512 1426 aa16.32■□□□□ 0.2
SMAD3-207ENST00000558763 PAPPAQ13219 1627 aa16.32■□□□□ 0.2
SMAD3-207ENST00000558763 KCNQ2O43526 872 aa16.31■□□□□ 0.2
SMAD3-207ENST00000558763 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
SMAD3-207ENST00000558763 MEIS3Q99687 375 aa16.31■□□□□ 0.2
SMAD3-207ENST00000558763 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
SMAD3-207ENST00000558763 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
SMAD3-207ENST00000558763 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
SMAD3-207ENST00000558763 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
SMAD3-207ENST00000558763 CHPF2Q9P2E5 772 aa16.3■□□□□ 0.2
SMAD3-207ENST00000558763 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
SMAD3-207ENST00000558763 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
SMAD3-207ENST00000558763 SBF2Q86WG5 1849 aa16.3■□□□□ 0.2
SMAD3-207ENST00000558763 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
SMAD3-207ENST00000558763 CCT4P50991 539 aaKnown RBP16.29■□□□□ 0.2
SMAD3-207ENST00000558763 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
SMAD3-207ENST00000558763 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
SMAD3-207ENST00000558763 ASAP1Q9ULH1 1129 aa16.29■□□□□ 0.2
SMAD3-207ENST00000558763 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
SMAD3-207ENST00000558763 NUCB1Q02818 461 aa16.28■□□□□ 0.2
SMAD3-207ENST00000558763 LAMB4A4D0S4 1761 aa16.27■□□□□ 0.2
SMAD3-207ENST00000558763 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.19
SMAD3-207ENST00000558763 CEP85Q6P2H3 762 aa16.27■□□□□ 0.19
SMAD3-207ENST00000558763 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.19
SMAD3-207ENST00000558763 ANKRD44Q8N8A2 993 aa16.27■□□□□ 0.19
SMAD3-207ENST00000558763 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.19
SMAD3-207ENST00000558763 ATG3Q9NT62 314 aa16.27■□□□□ 0.19
SMAD3-207ENST00000558763 BTAF1O14981 1849 aa16.27■□□□□ 0.19
SMAD3-207ENST00000558763 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.19
SMAD3-207ENST00000558763 PROSER3Q2NL68 480 aa16.26■□□□□ 0.19
SMAD3-207ENST00000558763 SLC4A10Q6U841 1118 aa16.26■□□□□ 0.19
SMAD3-207ENST00000558763 ADCY9O60503 1353 aa16.26■□□□□ 0.19
SMAD3-207ENST00000558763 MSH5O43196 834 aa16.26■□□□□ 0.19
SMAD3-207ENST00000558763 ANXA1P04083 346 aa16.26■□□□□ 0.19
SMAD3-207ENST00000558763 GCC1Q96CN9 775 aa16.26■□□□□ 0.19
SMAD3-207ENST00000558763 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
SMAD3-207ENST00000558763 PDIA6Q15084 440 aa16.24■□□□□ 0.19
SMAD3-207ENST00000558763 TRIM37O94972 964 aa16.24■□□□□ 0.19
SMAD3-207ENST00000558763 CHD1LQ86WJ1 897 aa16.24■□□□□ 0.19
SMAD3-207ENST00000558763 RPAP2Q8IXW5 612 aaPredicted RBP16.24■□□□□ 0.19
SMAD3-207ENST00000558763 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
SMAD3-207ENST00000558763 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
SMAD3-207ENST00000558763 DBF4Q9UBU7 674 aaPredicted RBP16.24■□□□□ 0.19
SMAD3-207ENST00000558763 DCTPP1Q9H773 170 aa16.23■□□□□ 0.19
SMAD3-207ENST00000558763 LNPKQ9C0E8 428 aa16.22■□□□□ 0.19
SMAD3-207ENST00000558763 PALLDQ8WX93 1383 aa16.22■□□□□ 0.19
SMAD3-207ENST00000558763 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
SMAD3-207ENST00000558763 USP44Q9H0E7 712 aa16.22■□□□□ 0.19
SMAD3-207ENST00000558763 LRP10Q7Z4F1 713 aa16.21■□□□□ 0.19
SMAD3-207ENST00000558763 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
SMAD3-207ENST00000558763 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
SMAD3-207ENST00000558763 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
SMAD3-207ENST00000558763 SNRPA1P09661 255 aaKnown RBP16.2■□□□□ 0.18
SMAD3-207ENST00000558763 DNAAF4Q8WXU2 420 aa16.2■□□□□ 0.18
SMAD3-207ENST00000558763 DDX21Q9NR30 783 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMAD3-207ENST00000558763 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
SMAD3-207ENST00000558763 SLC4A9Q96Q91 983 aa16.19■□□□□ 0.18
SMAD3-207ENST00000558763 GNAI2P04899 355 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 ANKRD45Q5TZF3 282 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 TJP1Q07157 1748 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 SEC24BO95487 1268 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 GNAI3P08754 354 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 HYPKQ9NX55 129 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
SMAD3-207ENST00000558763 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
SMAD3-207ENST00000558763 SIK1P57059 783 aa16.17■□□□□ 0.18
SMAD3-207ENST00000558763 DNAJC10Q8IXB1 793 aa16.17■□□□□ 0.18
SMAD3-207ENST00000558763 TNS1Q9HBL0 1735 aaKnown RBP16.17■□□□□ 0.18
SMAD3-207ENST00000558763 ATP6V1AP38606 617 aa16.17■□□□□ 0.18
SMAD3-207ENST00000558763 ANP32AP39687 249 aaKnown RBP16.17■□□□□ 0.18
SMAD3-207ENST00000558763 KCNQ4P56696 695 aa16.17■□□□□ 0.18
SMAD3-207ENST00000558763 LY75O60449 1722 aa16.16■□□□□ 0.18
SMAD3-207ENST00000558763 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms