RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TESK2Q96S53 571 aa16.76■□□□□ 0.27
SMAD3-206ENST00000558739 TONSLQ96HA7 1378 aa16.76■□□□□ 0.27
SMAD3-206ENST00000558739 EYA1Q99502 592 aa16.75■□□□□ 0.27
SMAD3-206ENST00000558739 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
SMAD3-206ENST00000558739 FER1L6Q2WGJ9 1857 aa16.75■□□□□ 0.27
SMAD3-206ENST00000558739 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
SMAD3-206ENST00000558739 CCDC85CA6NKD9 419 aa16.74■□□□□ 0.27
SMAD3-206ENST00000558739 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
SMAD3-206ENST00000558739 TM4SF1P30408 202 aa16.74■□□□□ 0.27
SMAD3-206ENST00000558739 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
SMAD3-206ENST00000558739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMAD3-206ENST00000558739 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
SMAD3-206ENST00000558739 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
SMAD3-206ENST00000558739 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
SMAD3-206ENST00000558739 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
SMAD3-206ENST00000558739 TTLL6Q8N841 843 aa16.71■□□□□ 0.27
SMAD3-206ENST00000558739 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
SMAD3-206ENST00000558739 CACNA1SQ13698 1873 aa16.7■□□□□ 0.26
SMAD3-206ENST00000558739 RGS19P49795 217 aa16.7■□□□□ 0.26
SMAD3-206ENST00000558739 NFIXQ14938 502 aa16.7■□□□□ 0.26
SMAD3-206ENST00000558739 ERFEQ4G0M1 354 aa16.7■□□□□ 0.26
SMAD3-206ENST00000558739 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
SMAD3-206ENST00000558739 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
SMAD3-206ENST00000558739 C2CD5Q86YS7 1000 aa16.69■□□□□ 0.26
SMAD3-206ENST00000558739 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
SMAD3-206ENST00000558739 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
SMAD3-206ENST00000558739 TMEM88BA6NKF7 163 aa16.68■□□□□ 0.26
SMAD3-206ENST00000558739 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
SMAD3-206ENST00000558739 ADAMTSL1Q8N6G6 1762 aa16.68■□□□□ 0.26
SMAD3-206ENST00000558739 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
SMAD3-206ENST00000558739 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
SMAD3-206ENST00000558739 C21orf2O43822 256 aa16.66■□□□□ 0.26
SMAD3-206ENST00000558739 SOS1Q07889 1333 aaPredicted RBP16.66■□□□□ 0.26
SMAD3-206ENST00000558739 SCN4AP35499 1836 aa16.66■□□□□ 0.26
SMAD3-206ENST00000558739 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
SMAD3-206ENST00000558739 CABP4P57796 275 aa16.65■□□□□ 0.26
SMAD3-206ENST00000558739 LDHDQ86WU2 507 aa16.65■□□□□ 0.26
SMAD3-206ENST00000558739 TSKSQ9UJT2 592 aa16.65■□□□□ 0.26
SMAD3-206ENST00000558739 SLX4Q8IY92 1834 aa16.65■□□□□ 0.26
SMAD3-206ENST00000558739 WASHC2AQ641Q2 1341 aa16.65■□□□□ 0.26
SMAD3-206ENST00000558739 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
SMAD3-206ENST00000558739 ZPR1O75312 459 aa16.64■□□□□ 0.25
SMAD3-206ENST00000558739 SERPINB2P05120 415 aa16.64■□□□□ 0.25
SMAD3-206ENST00000558739 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
SMAD3-206ENST00000558739 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.25
SMAD3-206ENST00000558739 EAPPQ56P03 285 aaPredicted RBP16.63■□□□□ 0.25
SMAD3-206ENST00000558739 CARD14Q9BXL6 1004 aa16.63■□□□□ 0.25
SMAD3-206ENST00000558739 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
SMAD3-206ENST00000558739 COL15A1P39059 1388 aa16.63■□□□□ 0.25
SMAD3-206ENST00000558739 CASP8AP2Q9UKL3 1982 aa16.62■□□□□ 0.25
SMAD3-206ENST00000558739 H0YIN7 160 aa16.62■□□□□ 0.25
SMAD3-206ENST00000558739 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
SMAD3-206ENST00000558739 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
SMAD3-206ENST00000558739 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
SMAD3-206ENST00000558739 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
SMAD3-206ENST00000558739 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
SMAD3-206ENST00000558739 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMAD3-206ENST00000558739 TAOK3Q9H2K8 898 aa16.61■□□□□ 0.25
SMAD3-206ENST00000558739 ZNF541Q9H0D2 1346 aa16.61■□□□□ 0.25
SMAD3-206ENST00000558739 DEFB115Q30KQ5 88 aa16.6■□□□□ 0.25
SMAD3-206ENST00000558739 MAP1SQ66K74 1059 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-206ENST00000558739 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
SMAD3-206ENST00000558739 NARFQ9UHQ1 456 aa16.6■□□□□ 0.25
SMAD3-206ENST00000558739 ZBTB1Q9Y2K1 713 aa16.6■□□□□ 0.25
SMAD3-206ENST00000558739 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
SMAD3-206ENST00000558739 MAP2K1Q02750 393 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-206ENST00000558739 FMR1Q06787 632 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMAD3-206ENST00000558739 L3MBTL3Q96JM7 780 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-206ENST00000558739 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
SMAD3-206ENST00000558739 LTBP3Q9NS15 1303 aa16.59■□□□□ 0.25
SMAD3-206ENST00000558739 IQCA1LA6NCM1 817 aa16.58■□□□□ 0.24
SMAD3-206ENST00000558739 GRM1Q13255 1194 aa16.58■□□□□ 0.24
SMAD3-206ENST00000558739 ABT1Q9ULW3 272 aaKnown RBP16.58■□□□□ 0.24
SMAD3-206ENST00000558739 ARFGEF2Q9Y6D5 1785 aa16.58■□□□□ 0.24
SMAD3-206ENST00000558739 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
SMAD3-206ENST00000558739 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
SMAD3-206ENST00000558739 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
SMAD3-206ENST00000558739 CYP19A1P11511 503 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-206ENST00000558739 MTHFSP49914 203 aa16.56■□□□□ 0.24
SMAD3-206ENST00000558739 MCOLN1Q9GZU1 580 aa16.56■□□□□ 0.24
SMAD3-206ENST00000558739 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
SMAD3-206ENST00000558739 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
SMAD3-206ENST00000558739 CYP4F22Q6NT55 531 aa16.55■□□□□ 0.24
SMAD3-206ENST00000558739 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
SMAD3-206ENST00000558739 CNTROBQ8N137 903 aa16.55■□□□□ 0.24
SMAD3-206ENST00000558739 CAPNS2Q96L46 248 aa16.55■□□□□ 0.24
SMAD3-206ENST00000558739 EPHX2P34913 555 aa16.54■□□□□ 0.24
SMAD3-206ENST00000558739 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-206ENST00000558739 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
SMAD3-206ENST00000558739 PRR5LQ6MZQ0 368 aa16.54■□□□□ 0.24
SMAD3-206ENST00000558739 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-206ENST00000558739 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
SMAD3-206ENST00000558739 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
SMAD3-206ENST00000558739 HACL1Q9UJ83 578 aa16.53■□□□□ 0.24
SMAD3-206ENST00000558739 MKI67P46013 3256 aaKnown RBP16.53■□□□□ 0.24
SMAD3-206ENST00000558739 AOC2O75106 756 aa16.52■□□□□ 0.24
SMAD3-206ENST00000558739 OLFM4Q6UX06 510 aa16.52■□□□□ 0.24
SMAD3-206ENST00000558739 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-206ENST00000558739 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
SMAD3-206ENST00000558739 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms