RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CNTNAP4Q9C0A0 1308 aa10.9□□□□□ -0.66
TRAF3-205ENST00000558700 ERICH6Q7L0X2 663 aa10.9□□□□□ -0.66
TRAF3-205ENST00000558700 AMIGO3Q86WK7 504 aa10.9□□□□□ -0.66
TRAF3-205ENST00000558700 CD2APQ9Y5K6 639 aa10.9□□□□□ -0.66
TRAF3-205ENST00000558700 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
TRAF3-205ENST00000558700 ZNF784Q8NCA9 323 aaPredicted RBP10.89□□□□□ -0.67
TRAF3-205ENST00000558700 RTCBQ9Y3I0 505 aaKnown RBP10.89□□□□□ -0.67
TRAF3-205ENST00000558700 UBR2Q8IWV8 1755 aa10.89□□□□□ -0.67
TRAF3-205ENST00000558700 MYH14Q7Z406 1995 aaKnown RBP10.88□□□□□ -0.67
TRAF3-205ENST00000558700 PER1O15534 1290 aaPredicted RBP10.88□□□□□ -0.67
TRAF3-205ENST00000558700 GRIN3BO60391 1043 aa10.88□□□□□ -0.67
TRAF3-205ENST00000558700 DIAPH1O60610 1272 aaKnown RBP10.88□□□□□ -0.67
TRAF3-205ENST00000558700 AKAP4Q5JQC9 854 aa10.88□□□□□ -0.67
TRAF3-205ENST00000558700 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
TRAF3-205ENST00000558700 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
TRAF3-205ENST00000558700 KIAA1551Q9HCM1 1747 aa10.88□□□□□ -0.67
TRAF3-205ENST00000558700 C10orf71Q711Q0 1435 aa10.87□□□□□ -0.67
TRAF3-205ENST00000558700 HMOX1P09601 288 aa10.87□□□□□ -0.67
TRAF3-205ENST00000558700 PYGBP11216 843 aa10.87□□□□□ -0.67
TRAF3-205ENST00000558700 MNX1P50219 401 aaPredicted RBP10.87□□□□□ -0.67
TRAF3-205ENST00000558700 SLC4A9Q96Q91 983 aa10.87□□□□□ -0.67
TRAF3-205ENST00000558700 WDR70Q9NW82 654 aa10.87□□□□□ -0.67
TRAF3-205ENST00000558700 KCPQ6ZWJ8 1503 aa10.87□□□□□ -0.67
TRAF3-205ENST00000558700 SIPA1L3O60292 1781 aaPredicted RBP10.86□□□□□ -0.67
TRAF3-205ENST00000558700 PTCD1O75127 700 aaKnown RBP10.86□□□□□ -0.67
TRAF3-205ENST00000558700 YBX3P16989 372 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAF3-205ENST00000558700 SMIM5Q71RC9 77 aa10.86□□□□□ -0.67
TRAF3-205ENST00000558700 SLC52A2Q9HAB3 445 aa10.86□□□□□ -0.67
TRAF3-205ENST00000558700 MMP10P09238 476 aa10.85□□□□□ -0.67
TRAF3-205ENST00000558700 CRKLP46109 303 aaKnown RBP10.85□□□□□ -0.67
TRAF3-205ENST00000558700 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
TRAF3-205ENST00000558700 NFATC2IPQ8NCF5 419 aa10.85□□□□□ -0.67
TRAF3-205ENST00000558700 GTF3C3Q9Y5Q9 886 aa10.85□□□□□ -0.67
TRAF3-205ENST00000558700 PXDNLA1KZ92 1463 aa10.85□□□□□ -0.67
TRAF3-205ENST00000558700 N4BP2Q86UW6 1770 aaPredicted RBP10.85□□□□□ -0.67
TRAF3-205ENST00000558700 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
TRAF3-205ENST00000558700 RNMTO43148 476 aaKnown RBP10.84□□□□□ -0.67
TRAF3-205ENST00000558700 RPS6KA4O75676 772 aa10.84□□□□□ -0.67
TRAF3-205ENST00000558700 RFC4P35249 363 aa10.84□□□□□ -0.67
TRAF3-205ENST00000558700 NLGN1Q8N2Q7 840 aa10.84□□□□□ -0.67
TRAF3-205ENST00000558700 CFAP53Q96M91 514 aa10.84□□□□□ -0.67
TRAF3-205ENST00000558700 SCN7AQ01118 1682 aa10.83□□□□□ -0.68
TRAF3-205ENST00000558700 U2SURPO15042 1029 aaKnown RBP10.83□□□□□ -0.68
TRAF3-205ENST00000558700 ARHGEF1Q92888 912 aaKnown RBP10.83□□□□□ -0.68
TRAF3-205ENST00000558700 USP42Q9H9J4 1324 aaKnown RBP10.83□□□□□ -0.68
TRAF3-205ENST00000558700 ADCY9O60503 1353 aa10.82□□□□□ -0.68
TRAF3-205ENST00000558700 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-205ENST00000558700 GYS1P13807 737 aa10.82□□□□□ -0.68
TRAF3-205ENST00000558700 CNGB1Q14028 1251 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-205ENST00000558700 MTHFSDQ2M296 383 aaKnown RBP10.82□□□□□ -0.68
TRAF3-205ENST00000558700 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
TRAF3-205ENST00000558700 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
TRAF3-205ENST00000558700 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
TRAF3-205ENST00000558700 ARFGEF1Q9Y6D6 1849 aa10.81□□□□□ -0.68
TRAF3-205ENST00000558700 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
TRAF3-205ENST00000558700 TTC5Q8N0Z6 440 aa10.81□□□□□ -0.68
TRAF3-205ENST00000558700 LGR6Q9HBX8 967 aa10.81□□□□□ -0.68
TRAF3-205ENST00000558700 PARP3Q9Y6F1 533 aa10.81□□□□□ -0.68
TRAF3-205ENST00000558700 COL15A1P39059 1388 aa10.8□□□□□ -0.68
TRAF3-205ENST00000558700 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
TRAF3-205ENST00000558700 TGFB2P61812 414 aa10.8□□□□□ -0.68
TRAF3-205ENST00000558700 DNAJC10Q8IXB1 793 aa10.8□□□□□ -0.68
TRAF3-205ENST00000558700 NUDCQ9Y266 331 aa10.8□□□□□ -0.68
TRAF3-205ENST00000558700 SOS1Q07889 1333 aaPredicted RBP10.8□□□□□ -0.68
TRAF3-205ENST00000558700 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
TRAF3-205ENST00000558700 UTRNP46939 3433 aa10.79□□□□□ -0.68
TRAF3-205ENST00000558700 NRXN2Q9P2S2 1712 aa10.79□□□□□ -0.68
TRAF3-205ENST00000558700 GNAT3A8MTJ3 354 aa10.79□□□□□ -0.68
TRAF3-205ENST00000558700 TEFQ10587 303 aa10.79□□□□□ -0.68
TRAF3-205ENST00000558700 SLC39A6Q13433 755 aa10.79□□□□□ -0.68
TRAF3-205ENST00000558700 ZNF467Q7Z7K2 595 aaPredicted RBP10.79□□□□□ -0.68
TRAF3-205ENST00000558700 WWC3Q9ULE0 1092 aa10.79□□□□□ -0.68
TRAF3-205ENST00000558700 AFDNP55196 1824 aaKnown RBP10.79□□□□□ -0.68
TRAF3-205ENST00000558700 GOLGB1Q14789 3259 aaKnown RBP10.78□□□□□ -0.68
TRAF3-205ENST00000558700 ZPR1O75312 459 aa10.78□□□□□ -0.68
TRAF3-205ENST00000558700 CYP19A1P11511 503 aaPredicted RBP10.78□□□□□ -0.68
TRAF3-205ENST00000558700 PRKAR2BP31323 418 aa10.78□□□□□ -0.68
TRAF3-205ENST00000558700 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
TRAF3-205ENST00000558700 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
TRAF3-205ENST00000558700 SRP68Q9UHB9 627 aaKnown RBP10.78□□□□□ -0.68
TRAF3-205ENST00000558700 CEMIPQ8WUJ3 1361 aa10.77□□□□□ -0.68
TRAF3-205ENST00000558700 BCORQ6W2J9 1755 aa10.77□□□□□ -0.68
TRAF3-205ENST00000558700 C1QTNF8P60827 252 aa10.77□□□□□ -0.69
TRAF3-205ENST00000558700 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
TRAF3-205ENST00000558700 ZBTB1Q9Y2K1 713 aa10.77□□□□□ -0.69
TRAF3-205ENST00000558700 LAMB4A4D0S4 1761 aa10.77□□□□□ -0.69
TRAF3-205ENST00000558700 HEG1Q9ULI3 1381 aa10.77□□□□□ -0.69
TRAF3-205ENST00000558700 STARD3NLO95772 234 aa10.76□□□□□ -0.69
TRAF3-205ENST00000558700 PPP2R1AP30153 589 aa10.76□□□□□ -0.69
TRAF3-205ENST00000558700 DDR1Q08345 913 aa10.76□□□□□ -0.69
TRAF3-205ENST00000558700 BCS1LQ9Y276 419 aa10.76□□□□□ -0.69
TRAF3-205ENST00000558700 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
TRAF3-205ENST00000558700 U2AF1L5P0DN76 240 aaPredicted RBP10.75□□□□□ -0.69
TRAF3-205ENST00000558700 U2AF1Q01081 240 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRAF3-205ENST00000558700 USPL1Q5W0Q7 1092 aa10.75□□□□□ -0.69
TRAF3-205ENST00000558700 ZNF790Q6PG37 636 aa10.75□□□□□ -0.69
TRAF3-205ENST00000558700 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
TRAF3-205ENST00000558700 DLG5Q8TDM6 1919 aa10.74□□□□□ -0.69
TRAF3-205ENST00000558700 A0A087WZG4 1122 aa10.74□□□□□ -0.69
TRAF3-205ENST00000558700 A0A0G2JLW4 131 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms