RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 DIEXFQ68CQ4 756 aaKnown RBP13.33□□□□□ -0.28
SEMA6D-209ENST00000558431 PANK3Q9H999 370 aa13.33□□□□□ -0.28
SEMA6D-209ENST00000558431 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
SEMA6D-209ENST00000558431 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
SEMA6D-209ENST00000558431 LY75O60449 1722 aa13.32□□□□□ -0.28
SEMA6D-209ENST00000558431 ITGB4P16144 1822 aa13.32□□□□□ -0.28
SEMA6D-209ENST00000558431 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
SEMA6D-209ENST00000558431 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
SEMA6D-209ENST00000558431 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
SEMA6D-209ENST00000558431 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
SEMA6D-209ENST00000558431 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
SEMA6D-209ENST00000558431 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
SEMA6D-209ENST00000558431 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
SEMA6D-209ENST00000558431 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
SEMA6D-209ENST00000558431 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
SEMA6D-209ENST00000558431 KCNQ4P56696 695 aa13.29□□□□□ -0.28
SEMA6D-209ENST00000558431 SLC27A3Q5K4L6 730 aa13.29□□□□□ -0.28
SEMA6D-209ENST00000558431 GPR153Q6NV75 609 aa13.29□□□□□ -0.28
SEMA6D-209ENST00000558431 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
SEMA6D-209ENST00000558431 ZNF827Q17R98 1081 aa13.28□□□□□ -0.28
SEMA6D-209ENST00000558431 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
SEMA6D-209ENST00000558431 KHSRPQ92945 711 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEMA6D-209ENST00000558431 EYA1Q99502 592 aa13.28□□□□□ -0.28
SEMA6D-209ENST00000558431 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
SEMA6D-209ENST00000558431 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
SEMA6D-209ENST00000558431 CYP27B1O15528 508 aa13.27□□□□□ -0.29
SEMA6D-209ENST00000558431 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
SEMA6D-209ENST00000558431 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
SEMA6D-209ENST00000558431 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.29
SEMA6D-209ENST00000558431 NSD2O96028 1365 aa13.27□□□□□ -0.29
SEMA6D-209ENST00000558431 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.29
SEMA6D-209ENST00000558431 MPRIPQ6WCQ1 1025 aa13.26□□□□□ -0.29
SEMA6D-209ENST00000558431 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
SEMA6D-209ENST00000558431 DDX27Q96GQ7 796 aaKnown RBP13.26□□□□□ -0.29
SEMA6D-209ENST00000558431 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
SEMA6D-209ENST00000558431 PCDHGA4Q9Y5G9 962 aa13.26□□□□□ -0.29
SEMA6D-209ENST00000558431 TAF1LQ8IZX4 1826 aa13.25□□□□□ -0.29
SEMA6D-209ENST00000558431 C5P01031 1676 aa13.25□□□□□ -0.29
SEMA6D-209ENST00000558431 SLC34A2O95436 690 aa13.25□□□□□ -0.29
SEMA6D-209ENST00000558431 PTGER2P43116 358 aa13.25□□□□□ -0.29
SEMA6D-209ENST00000558431 EIF4A2Q14240 407 aaKnown RBP13.25□□□□□ -0.29
SEMA6D-209ENST00000558431 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
SEMA6D-209ENST00000558431 NCAPD2Q15021 1401 aa13.24□□□□□ -0.29
SEMA6D-209ENST00000558431 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
SEMA6D-209ENST00000558431 NUDT7P0C024 238 aa13.23□□□□□ -0.29
SEMA6D-209ENST00000558431 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
SEMA6D-209ENST00000558431 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
SEMA6D-209ENST00000558431 TBC1D12O60347 775 aa13.22□□□□□ -0.29
SEMA6D-209ENST00000558431 ARXQ96QS3 562 aa13.22□□□□□ -0.29
SEMA6D-209ENST00000558431 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
SEMA6D-209ENST00000558431 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
SEMA6D-209ENST00000558431 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
SEMA6D-209ENST00000558431 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
SEMA6D-209ENST00000558431 FHDC1Q9C0D6 1143 aaPredicted RBP13.21□□□□□ -0.29
SEMA6D-209ENST00000558431 HMGB2P26583 209 aaKnown RBP13.2□□□□□ -0.3
SEMA6D-209ENST00000558431 POLD1P28340 1107 aa13.2□□□□□ -0.3
SEMA6D-209ENST00000558431 PIGBQ92521 554 aa13.2□□□□□ -0.3
SEMA6D-209ENST00000558431 SYT17Q9BSW7 474 aa13.2□□□□□ -0.3
SEMA6D-209ENST00000558431 TMOD3Q9NYL9 352 aa13.2□□□□□ -0.3
SEMA6D-209ENST00000558431 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
SEMA6D-209ENST00000558431 PHKG2P15735 406 aa13.19□□□□□ -0.3
SEMA6D-209ENST00000558431 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
SEMA6D-209ENST00000558431 CHD4Q14839 1912 aa13.19□□□□□ -0.3
SEMA6D-209ENST00000558431 YY1P25490 414 aa13.18□□□□□ -0.3
SEMA6D-209ENST00000558431 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
SEMA6D-209ENST00000558431 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
SEMA6D-209ENST00000558431 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
SEMA6D-209ENST00000558431 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
SEMA6D-209ENST00000558431 COL24A1Q17RW2 1714 aa13.18□□□□□ -0.3
SEMA6D-209ENST00000558431 UBR3Q6ZT12 1888 aa13.17□□□□□ -0.3
SEMA6D-209ENST00000558431 POTEB3A0JP26 581 aa13.17□□□□□ -0.3
SEMA6D-209ENST00000558431 CC2D1BQ5T0F9 858 aaKnown RBP13.17□□□□□ -0.3
SEMA6D-209ENST00000558431 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
SEMA6D-209ENST00000558431 POTEBQ6S5H4 581 aa13.17□□□□□ -0.3
SEMA6D-209ENST00000558431 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
SEMA6D-209ENST00000558431 VIRMAQ69YN4 1812 aaKnown RBP13.17□□□□□ -0.3
SEMA6D-209ENST00000558431 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
SEMA6D-209ENST00000558431 MFSD10Q14728 455 aa13.16□□□□□ -0.3
SEMA6D-209ENST00000558431 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
SEMA6D-209ENST00000558431 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
SEMA6D-209ENST00000558431 AK7Q96M32 723 aa13.16□□□□□ -0.3
SEMA6D-209ENST00000558431 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.3
SEMA6D-209ENST00000558431 SIK1P57059 783 aa13.15□□□□□ -0.3
SEMA6D-209ENST00000558431 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
SEMA6D-209ENST00000558431 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
SEMA6D-209ENST00000558431 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
SEMA6D-209ENST00000558431 ASAP1Q9ULH1 1129 aa13.15□□□□□ -0.3
SEMA6D-209ENST00000558431 PHF14O94880 888 aa13.14□□□□□ -0.31
SEMA6D-209ENST00000558431 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
SEMA6D-209ENST00000558431 MTHFSP49914 203 aa13.14□□□□□ -0.31
SEMA6D-209ENST00000558431 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
SEMA6D-209ENST00000558431 DCAF5Q96JK2 942 aa13.14□□□□□ -0.31
SEMA6D-209ENST00000558431 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
SEMA6D-209ENST00000558431 SCN11AQ9UI33 1791 aa13.13□□□□□ -0.31
SEMA6D-209ENST00000558431 IL13P35225 146 aa13.13□□□□□ -0.31
SEMA6D-209ENST00000558431 CABP4P57796 275 aa13.13□□□□□ -0.31
SEMA6D-209ENST00000558431 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
SEMA6D-209ENST00000558431 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
SEMA6D-209ENST00000558431 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
SEMA6D-209ENST00000558431 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms