RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TYRO3Q06418 890 aa13.34□□□□□ -0.27
PCAT29-201ENST00000558411 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
PCAT29-201ENST00000558411 TDRD7Q8NHU6 1098 aaKnown RBP13.34□□□□□ -0.27
PCAT29-201ENST00000558411 TTC14Q96N46 770 aa13.34□□□□□ -0.27
PCAT29-201ENST00000558411 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
PCAT29-201ENST00000558411 LIMCH1Q9UPQ0 1083 aa13.34□□□□□ -0.27
PCAT29-201ENST00000558411 SMC3Q9UQE7 1217 aa13.34□□□□□ -0.27
PCAT29-201ENST00000558411 PIK3C2BO00750 1634 aa13.34□□□□□ -0.27
PCAT29-201ENST00000558411 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
PCAT29-201ENST00000558411 MEIS3Q99687 375 aa13.33□□□□□ -0.28
PCAT29-201ENST00000558411 NUP62CLQ9H1M0 184 aa13.33□□□□□ -0.28
PCAT29-201ENST00000558411 KCND1Q9NSA2 647 aa13.33□□□□□ -0.28
PCAT29-201ENST00000558411 ELP1O95163 1332 aa13.33□□□□□ -0.28
PCAT29-201ENST00000558411 CAVIN2O95810 425 aa13.33□□□□□ -0.28
PCAT29-201ENST00000558411 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
PCAT29-201ENST00000558411 FBXO38Q6PIJ6 1188 aa13.33□□□□□ -0.28
PCAT29-201ENST00000558411 NYAP1Q6ZVC0 841 aa13.33□□□□□ -0.28
PCAT29-201ENST00000558411 NOL10Q9BSC4 688 aaKnown RBP13.33□□□□□ -0.28
PCAT29-201ENST00000558411 KIF2AO00139 706 aaPredicted RBP13.32□□□□□ -0.28
PCAT29-201ENST00000558411 RBM43Q6ZSC3 357 aaKnown RBP13.32□□□□□ -0.28
PCAT29-201ENST00000558411 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
PCAT29-201ENST00000558411 CBX8Q9HC52 389 aa13.32□□□□□ -0.28
PCAT29-201ENST00000558411 ZNF215Q9UL58 517 aaPredicted RBP13.32□□□□□ -0.28
PCAT29-201ENST00000558411 RAD50Q92878 1312 aa13.32□□□□□ -0.28
PCAT29-201ENST00000558411 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
PCAT29-201ENST00000558411 CHGAP10645 457 aaKnown RBP13.31□□□□□ -0.28
PCAT29-201ENST00000558411 SRPK2P78362 688 aaKnown RBP13.31□□□□□ -0.28
PCAT29-201ENST00000558411 DNM1Q05193 864 aaKnown RBP13.31□□□□□ -0.28
PCAT29-201ENST00000558411 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 RTF1Q92541 710 aaKnown RBP13.31□□□□□ -0.28
PCAT29-201ENST00000558411 TRIM5Q9C035 493 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 POLKQ9UBT6 870 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 MTMR6Q9Y217 621 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 NEXMIFQ5QGS0 1516 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 ERICH4A6NGS2 130 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 CACTINQ8WUQ7 758 aaKnown RBP13.31□□□□□ -0.28
PCAT29-201ENST00000558411 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 NRBP1Q9UHY1 535 aa13.31□□□□□ -0.28
PCAT29-201ENST00000558411 KIF13AQ9H1H9 1805 aa13.3□□□□□ -0.28
PCAT29-201ENST00000558411 HTATSF1O43719 755 aaKnown RBP13.3□□□□□ -0.28
PCAT29-201ENST00000558411 SLU7O95391 586 aaKnown RBP13.3□□□□□ -0.28
PCAT29-201ENST00000558411 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCAT29-201ENST00000558411 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
PCAT29-201ENST00000558411 AK2P54819 239 aa13.3□□□□□ -0.28
PCAT29-201ENST00000558411 SARM1Q6SZW1 724 aa13.3□□□□□ -0.28
PCAT29-201ENST00000558411 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
PCAT29-201ENST00000558411 NPATQ14207 1427 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 HMOX1P09601 288 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
PCAT29-201ENST00000558411 IL13P35225 146 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
PCAT29-201ENST00000558411 ANO6Q4KMQ2 910 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 RUFY3Q7L099 469 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 LRRC8AQ8IWT6 810 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 ZSCAN31Q96LW9 406 aaPredicted RBP13.29□□□□□ -0.28
PCAT29-201ENST00000558411 EFCC1Q9HA90 598 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 FEZ2Q9UHY8 353 aaPredicted RBP13.29□□□□□ -0.28
PCAT29-201ENST00000558411 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
PCAT29-201ENST00000558411 HNRNPH2P55795 449 aaKnown RBP13.28□□□□□ -0.28
PCAT29-201ENST00000558411 KRT85P78386 507 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 ELF2Q15723 593 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 KRT24Q2M2I5 525 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 TNMDQ9H2S6 317 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 SH2B1Q9NRF2 756 aaPredicted RBP13.28□□□□□ -0.28
PCAT29-201ENST00000558411 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.28□□□□□ -0.28
PCAT29-201ENST00000558411 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 PTPRMP28827 1452 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 ERBB3P21860 1342 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 MUM1L1Q5H9M0 696 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 ADGRL3Q9HAR2 1447 aa13.28□□□□□ -0.28
PCAT29-201ENST00000558411 CHD2O14647 1828 aaKnown RBP13.28□□□□□ -0.28
PCAT29-201ENST00000558411 GNAI2P04899 355 aa13.27□□□□□ -0.28
PCAT29-201ENST00000558411 GJB2P29033 226 aa13.27□□□□□ -0.28
PCAT29-201ENST00000558411 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.28
PCAT29-201ENST00000558411 CLSTN2Q9H4D0 955 aa13.27□□□□□ -0.28
PCAT29-201ENST00000558411 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.29
PCAT29-201ENST00000558411 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
PCAT29-201ENST00000558411 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.29
PCAT29-201ENST00000558411 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.29
PCAT29-201ENST00000558411 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.29
PCAT29-201ENST00000558411 TEX35Q5T0J7 233 aa13.27□□□□□ -0.29
PCAT29-201ENST00000558411 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.29
PCAT29-201ENST00000558411 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 TUBB4AP04350 444 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 IRX3P78415 501 aaPredicted RBP13.26□□□□□ -0.29
PCAT29-201ENST00000558411 RAD51AP2Q09MP3 1159 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 CCDC144BQ3MJ40 725 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 TTC6Q86TZ1 520 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 CCDC144CPQ8IYA2 1237 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 L2HGDHQ9H9P8 463 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms