RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 BANK1Q8NDB2 785 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 CCDC114Q96M63 670 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 STX6O43752 255 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 VPS18Q9P253 973 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 IGSF3O75054 1194 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 FERMT3Q86UX7 667 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 HLTFQ14527 1009 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 HDXQ7Z353 690 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 VPS36Q86VN1 386 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 FAM114A1Q8IWE2 563 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 PTPRGP23470 1445 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 NBPF8Q3BBV2 869 aa13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 ZNF830Q96NB3 372 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-201ENST00000558282 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 BMP2KQ9NSY1 1161 aaPredicted RBP13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 VGLL3A8MV65 326 aa13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 RAB3GAP1Q15042 981 aa13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 NECTIN2Q92692 538 aa13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 SMC5Q8IY18 1101 aa13.6□□□□□ -0.23
CSPG4P12-201ENST00000558282 G3V3G9 751 aa13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 ATP6V1AP38606 617 aa13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 DNAJC21Q5F1R6 531 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 NUP88Q99567 741 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 NUP133Q8WUM0 1156 aa13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 FGFR1OPO95684 399 aaKnown RBP13.59□□□□□ -0.23
CSPG4P12-201ENST00000558282 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.23
CSPG4P12-201ENST00000558282 PIBF1Q8WXW3 757 aa13.58□□□□□ -0.23
CSPG4P12-201ENST00000558282 DDX12PQ92771 950 aa13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 STMN4Q9H169 189 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 FAM76AQ8TAV0 307 aa13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 NCOA2Q15596 1464 aa13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 CLNS1AP54105 237 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 DMTNQ08495 405 aa13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 CCDC178Q5BJE1 867 aa13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 CFAP57Q96MR6 1250 aa13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-201ENST00000558282 FSIP1Q8NA03 581 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 HMGB1P09429 215 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 TTC14Q96N46 770 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 CCDC69A6NI79 296 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 ALDH1L2Q3SY69 923 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 VPS37DQ86XT2 251 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 TMEM57Q8N5G2 664 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 SCLT1Q96NL6 688 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 KIF3CO14782 793 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 HMOX1P09601 288 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 ARHGAP25P42331 645 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 TUBB2AQ13885 445 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 TUBB2BQ9BVA1 445 aa13.57□□□□□ -0.24
CSPG4P12-201ENST00000558282 GOLIM4O00461 696 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 ZFYP08048 801 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 INPP5BP32019 993 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 RARSP54136 660 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 CWC27Q6UX04 472 aaKnown RBP13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 LMNTD2Q8IXW0 634 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 GAS2L2Q8NHY3 880 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 SH3BGRP55822 239 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 GOPCQ9HD26 462 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 KDM4AO75164 1064 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 GSTTP1A0A1W2PQM5 241 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 ANKRD18BA2A2Z9 1011 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 ZSCAN22P10073 491 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 ZSWIM4Q9H7M6 989 aa13.56□□□□□ -0.24
CSPG4P12-201ENST00000558282 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 GLRX3O76003 335 aaKnown RBP13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 GIMAP6Q6P9H5 292 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 CACNA2D4Q7Z3S7 1137 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 CTAGE9A4FU28 777 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 KANK3Q6NY19 840 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 U2AF2P26368 475 aaKnown RBP eCLIP13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 NACAP1Q9BZK3 213 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 ATP2C2O75185 946 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 C8orf34Q49A92 452 aa13.55□□□□□ -0.24
CSPG4P12-201ENST00000558282 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms