RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
SHC4-205ENST00000558220 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
SHC4-205ENST00000558220 NFAT5O94916 1531 aa11.76□□□□□ -0.53
SHC4-205ENST00000558220 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
SHC4-205ENST00000558220 LTN1O94822 1766 aa11.75□□□□□ -0.53
SHC4-205ENST00000558220 KCNQ2O43526 872 aa11.75□□□□□ -0.53
SHC4-205ENST00000558220 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
SHC4-205ENST00000558220 TMC1Q8TDI8 760 aa11.75□□□□□ -0.53
SHC4-205ENST00000558220 TERF2IPQ9NYB0 399 aa11.75□□□□□ -0.53
SHC4-205ENST00000558220 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
SHC4-205ENST00000558220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.74□□□□□ -0.53
SHC4-205ENST00000558220 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
SHC4-205ENST00000558220 KCNC4Q03721 635 aa11.73□□□□□ -0.53
SHC4-205ENST00000558220 DDX12PQ92771 950 aa11.73□□□□□ -0.53
SHC4-205ENST00000558220 EDC4Q6P2E9 1401 aaKnown RBP11.72□□□□□ -0.53
SHC4-205ENST00000558220 NINLQ9Y2I6 1382 aa11.72□□□□□ -0.53
SHC4-205ENST00000558220 TNS2Q63HR2 1409 aa11.71□□□□□ -0.53
SHC4-205ENST00000558220 IL2RBP14784 551 aa11.71□□□□□ -0.53
SHC4-205ENST00000558220 SLC12A5Q9H2X9 1139 aa11.71□□□□□ -0.53
SHC4-205ENST00000558220 NLRP2Q9NX02 1062 aa11.71□□□□□ -0.53
SHC4-205ENST00000558220 STK32BQ9NY57 414 aa11.71□□□□□ -0.53
SHC4-205ENST00000558220 CD163L1Q9NR16 1453 aa11.7□□□□□ -0.54
SHC4-205ENST00000558220 TXNRD1Q16881 649 aa11.7□□□□□ -0.54
SHC4-205ENST00000558220 NME9Q86XW9 330 aa11.7□□□□□ -0.54
SHC4-205ENST00000558220 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
SHC4-205ENST00000558220 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
SHC4-205ENST00000558220 TSR3Q9UJK0 312 aaKnown RBP11.7□□□□□ -0.54
SHC4-205ENST00000558220 NHSQ6T4R5 1651 aa11.7□□□□□ -0.54
SHC4-205ENST00000558220 FAM208AQ9UK61 1670 aaKnown RBP11.7□□□□□ -0.54
SHC4-205ENST00000558220 CASZ1Q86V15 1759 aa11.69□□□□□ -0.54
SHC4-205ENST00000558220 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
SHC4-205ENST00000558220 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
SHC4-205ENST00000558220 LRCH3Q96II8 777 aa11.69□□□□□ -0.54
SHC4-205ENST00000558220 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
SHC4-205ENST00000558220 A0A1W2PP64 1363 aa11.68□□□□□ -0.54
SHC4-205ENST00000558220 SLC15A2Q16348 729 aa11.68□□□□□ -0.54
SHC4-205ENST00000558220 TSR1Q2NL82 804 aaKnown RBP11.67□□□□□ -0.54
SHC4-205ENST00000558220 PTF1AQ7RTS3 328 aa11.67□□□□□ -0.54
SHC4-205ENST00000558220 IP6K1Q92551 441 aa11.67□□□□□ -0.54
SHC4-205ENST00000558220 COG3Q96JB2 828 aa11.67□□□□□ -0.54
SHC4-205ENST00000558220 YY1P25490 414 aa11.66□□□□□ -0.54
SHC4-205ENST00000558220 NBR1Q14596 966 aa11.66□□□□□ -0.54
SHC4-205ENST00000558220 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
SHC4-205ENST00000558220 BTAF1O14981 1849 aa11.65□□□□□ -0.54
SHC4-205ENST00000558220 ST20-MTHFSA0A0A6YYL1 179 aa11.65□□□□□ -0.54
SHC4-205ENST00000558220 Q6ZNB5 142 aa11.65□□□□□ -0.54
SHC4-205ENST00000558220 MTFR1LQ9H019 292 aa11.65□□□□□ -0.54
SHC4-205ENST00000558220 MAP3K7O43318 606 aa11.64□□□□□ -0.55
SHC4-205ENST00000558220 ZBTB7AO95365 584 aa11.64□□□□□ -0.55
SHC4-205ENST00000558220 AMPHP49418 695 aa11.64□□□□□ -0.55
SHC4-205ENST00000558220 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
SHC4-205ENST00000558220 PACS2Q86VP3 889 aa11.64□□□□□ -0.55
SHC4-205ENST00000558220 ACSBG1Q96GR2 724 aa11.64□□□□□ -0.55
SHC4-205ENST00000558220 TESK2Q96S53 571 aa11.64□□□□□ -0.55
SHC4-205ENST00000558220 HMGB2P26583 209 aaKnown RBP11.63□□□□□ -0.55
SHC4-205ENST00000558220 TMF1P82094 1093 aa11.63□□□□□ -0.55
SHC4-205ENST00000558220 SLC27A3Q5K4L6 730 aa11.63□□□□□ -0.55
SHC4-205ENST00000558220 ANKRD36BQ8N2N9 1353 aa11.63□□□□□ -0.55
SHC4-205ENST00000558220 PDIA6Q15084 440 aa11.62□□□□□ -0.55
SHC4-205ENST00000558220 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
SHC4-205ENST00000558220 QSER1Q2KHR3 1735 aa11.61□□□□□ -0.55
SHC4-205ENST00000558220 HOXC9P31274 260 aa11.61□□□□□ -0.55
SHC4-205ENST00000558220 DDX54Q8TDD1 881 aaKnown RBP11.61□□□□□ -0.55
SHC4-205ENST00000558220 SLC16A10Q8TF71 515 aa11.61□□□□□ -0.55
SHC4-205ENST00000558220 LTV1Q96GA3 475 aaPredicted RBP11.61□□□□□ -0.55
SHC4-205ENST00000558220 RTL1A6NKG5 1358 aa11.61□□□□□ -0.55
SHC4-205ENST00000558220 MYOM1P52179 1685 aa11.61□□□□□ -0.55
SHC4-205ENST00000558220 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
SHC4-205ENST00000558220 CHD4Q14839 1912 aa11.6□□□□□ -0.55
SHC4-205ENST00000558220 PDGFDQ9GZP0 370 aaPredicted RBP11.6□□□□□ -0.55
SHC4-205ENST00000558220 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
SHC4-205ENST00000558220 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
SHC4-205ENST00000558220 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
SHC4-205ENST00000558220 PPP4CP60510 307 aa11.59□□□□□ -0.55
SHC4-205ENST00000558220 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
SHC4-205ENST00000558220 ZCRB1Q8TBF4 217 aaKnown RBP11.59□□□□□ -0.55
SHC4-205ENST00000558220 SYT17Q9BSW7 474 aa11.59□□□□□ -0.55
SHC4-205ENST00000558220 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
SHC4-205ENST00000558220 SMAPO00193 183 aa11.58□□□□□ -0.56
SHC4-205ENST00000558220 SYTL4Q96C24 671 aaPredicted RBP11.58□□□□□ -0.56
SHC4-205ENST00000558220 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
SHC4-205ENST00000558220 ARXQ96QS3 562 aa11.58□□□□□ -0.56
SHC4-205ENST00000558220 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
SHC4-205ENST00000558220 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
SHC4-205ENST00000558220 KIF20BQ96Q89 1820 aa11.58□□□□□ -0.56
SHC4-205ENST00000558220 LY75O60449 1722 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 UTRNP46939 3433 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 USP47Q96K76 1375 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 FYB1O15117 783 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 POLD1P28340 1107 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 FAM198AQ9UFP1 575 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 DOT1LQ8TEK3 1739 aa11.57□□□□□ -0.56
SHC4-205ENST00000558220 MAP3K5Q99683 1374 aa11.56□□□□□ -0.56
SHC4-205ENST00000558220 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
SHC4-205ENST00000558220 PRIM1P49642 420 aaKnown RBP11.56□□□□□ -0.56
SHC4-205ENST00000558220 PRSS12P56730 875 aa11.56□□□□□ -0.56
SHC4-205ENST00000558220 TJAP1Q5JTD0 557 aa11.56□□□□□ -0.56
SHC4-205ENST00000558220 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
SHC4-205ENST00000558220 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms