RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
RCCD1-209ENST00000557750 C4BP0C0L5 1744 aa15.97■□□□□ 0.15
RCCD1-209ENST00000557750 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
RCCD1-209ENST00000557750 KCNQ3O43525 872 aa15.96■□□□□ 0.15
RCCD1-209ENST00000557750 ATP6V1AP38606 617 aa15.96■□□□□ 0.15
RCCD1-209ENST00000557750 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.15
RCCD1-209ENST00000557750 ADCY9O60503 1353 aa15.96■□□□□ 0.15
RCCD1-209ENST00000557750 ZNF526Q8TF50 670 aaPredicted RBP15.95■□□□□ 0.14
RCCD1-209ENST00000557750 ZNF496Q96IT1 587 aaPredicted RBP15.95■□□□□ 0.14
RCCD1-209ENST00000557750 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
RCCD1-209ENST00000557750 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
RCCD1-209ENST00000557750 CFAP44Q96MT7 982 aa15.94■□□□□ 0.14
RCCD1-209ENST00000557750 SLC4A9Q96Q91 983 aa15.94■□□□□ 0.14
RCCD1-209ENST00000557750 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
RCCD1-209ENST00000557750 BABAM1Q9NWV8 329 aa15.93■□□□□ 0.14
RCCD1-209ENST00000557750 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
RCCD1-209ENST00000557750 CHL1O00533 1208 aa15.92■□□□□ 0.14
RCCD1-209ENST00000557750 SSFA2P28290 1259 aa15.92■□□□□ 0.14
RCCD1-209ENST00000557750 GNAI1P63096 354 aa15.92■□□□□ 0.14
RCCD1-209ENST00000557750 HNRNPUQ00839 825 aaKnown RBP eCLIP15.92■□□□□ 0.14
RCCD1-209ENST00000557750 ITPK1Q13572 414 aa15.92■□□□□ 0.14
RCCD1-209ENST00000557750 KCPQ6ZWJ8 1503 aa15.92■□□□□ 0.14
RCCD1-209ENST00000557750 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
RCCD1-209ENST00000557750 SIPA1L3O60292 1781 aaPredicted RBP15.92■□□□□ 0.14
RCCD1-209ENST00000557750 WDR63Q8IWG1 891 aa15.92■□□□□ 0.14
RCCD1-209ENST00000557750 HEG1Q9ULI3 1381 aa15.91■□□□□ 0.14
RCCD1-209ENST00000557750 HSPA6P17066 643 aa15.91■□□□□ 0.14
RCCD1-209ENST00000557750 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
RCCD1-209ENST00000557750 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
RCCD1-209ENST00000557750 ZNF853P0CG23 659 aa15.9■□□□□ 0.14
RCCD1-209ENST00000557750 EIF4A1P60842 406 aaKnown RBP15.9■□□□□ 0.14
RCCD1-209ENST00000557750 DNAJC10Q8IXB1 793 aa15.9■□□□□ 0.14
RCCD1-209ENST00000557750 IL16Q14005 1332 aa15.89■□□□□ 0.14
RCCD1-209ENST00000557750 GNPATO15228 680 aa15.89■□□□□ 0.13
RCCD1-209ENST00000557750 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
RCCD1-209ENST00000557750 ZNF521Q96K83 1311 aa15.89■□□□□ 0.13
RCCD1-209ENST00000557750 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
RCCD1-209ENST00000557750 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
RCCD1-209ENST00000557750 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
RCCD1-209ENST00000557750 PRAMEF22A3QJZ6 481 aa15.87■□□□□ 0.13
RCCD1-209ENST00000557750 STARD3NLO95772 234 aa15.87■□□□□ 0.13
RCCD1-209ENST00000557750 MMP10P09238 476 aa15.87■□□□□ 0.13
RCCD1-209ENST00000557750 KIF3CO14782 793 aa15.86■□□□□ 0.13
RCCD1-209ENST00000557750 CRKLP46109 303 aaKnown RBP15.86■□□□□ 0.13
RCCD1-209ENST00000557750 GOLGA2Q08379 1002 aa15.86■□□□□ 0.13
RCCD1-209ENST00000557750 KRT24Q2M2I5 525 aa15.86■□□□□ 0.13
RCCD1-209ENST00000557750 KDM3BQ7LBC6 1761 aa15.86■□□□□ 0.13
RCCD1-209ENST00000557750 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
RCCD1-209ENST00000557750 CYP19A1P11511 503 aaPredicted RBP15.86■□□□□ 0.13
RCCD1-209ENST00000557750 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
RCCD1-209ENST00000557750 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
RCCD1-209ENST00000557750 CNTNAP4Q9C0A0 1308 aa15.85■□□□□ 0.13
RCCD1-209ENST00000557750 FANCIQ9NVI1 1328 aa15.85■□□□□ 0.13
RCCD1-209ENST00000557750 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
RCCD1-209ENST00000557750 CCDC87Q9NVE4 849 aa15.84■□□□□ 0.13
RCCD1-209ENST00000557750 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
RCCD1-209ENST00000557750 E9PSI1 815 aa15.83■□□□□ 0.13
RCCD1-209ENST00000557750 RC3H1Q5TC82 1133 aaKnown RBP15.83■□□□□ 0.13
RCCD1-209ENST00000557750 ZNF831Q5JPB2 1677 aa15.83■□□□□ 0.12
RCCD1-209ENST00000557750 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.12
RCCD1-209ENST00000557750 TJP1Q07157 1748 aa15.83■□□□□ 0.12
RCCD1-209ENST00000557750 A0A0G2JLW4 131 aa15.83■□□□□ 0.12
RCCD1-209ENST00000557750 ELL2O00472 640 aaPredicted RBP15.83■□□□□ 0.12
RCCD1-209ENST00000557750 EIF2S2P20042 333 aaKnown RBP15.83■□□□□ 0.12
RCCD1-209ENST00000557750 TRAPPC3LQ5T215 181 aa15.83■□□□□ 0.12
RCCD1-209ENST00000557750 INTS5Q6P9B9 1019 aaKnown RBP15.83■□□□□ 0.12
RCCD1-209ENST00000557750 CDCA7LQ96GN5 454 aa15.83■□□□□ 0.12
RCCD1-209ENST00000557750 ZBTB1Q9Y2K1 713 aa15.83■□□□□ 0.12
RCCD1-209ENST00000557750 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.12
RCCD1-209ENST00000557750 A1BGP04217 495 aa15.82■□□□□ 0.12
RCCD1-209ENST00000557750 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
RCCD1-209ENST00000557750 TGFB2P61812 414 aa15.82■□□□□ 0.12
RCCD1-209ENST00000557750 DUSP27Q5VZP5 1158 aa15.82■□□□□ 0.12
RCCD1-209ENST00000557750 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
RCCD1-209ENST00000557750 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
RCCD1-209ENST00000557750 BCS1LQ9Y276 419 aa15.82■□□□□ 0.12
RCCD1-209ENST00000557750 NECTIN2Q92692 538 aa15.81■□□□□ 0.12
RCCD1-209ENST00000557750 ARHGEF1Q92888 912 aaKnown RBP15.81■□□□□ 0.12
RCCD1-209ENST00000557750 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
RCCD1-209ENST00000557750 ZBED9Q6R2W3 1325 aa15.81■□□□□ 0.12
RCCD1-209ENST00000557750 RPS6KA4O75676 772 aa15.8■□□□□ 0.12
RCCD1-209ENST00000557750 HOXB7P09629 217 aa15.8■□□□□ 0.12
RCCD1-209ENST00000557750 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
RCCD1-209ENST00000557750 SLFN5Q08AF3 891 aa15.8■□□□□ 0.12
RCCD1-209ENST00000557750 KIAA1551Q9HCM1 1747 aa15.8■□□□□ 0.12
RCCD1-209ENST00000557750 EXOSC9Q06265 439 aaKnown RBP15.79■□□□□ 0.12
RCCD1-209ENST00000557750 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
RCCD1-209ENST00000557750 ARHGAP27Q6ZUM4 889 aa15.79■□□□□ 0.12
RCCD1-209ENST00000557750 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
RCCD1-209ENST00000557750 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
RCCD1-209ENST00000557750 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
RCCD1-209ENST00000557750 KIF13BQ9NQT8 1826 aa15.79■□□□□ 0.12
RCCD1-209ENST00000557750 C10orf71Q711Q0 1435 aa15.79■□□□□ 0.12
RCCD1-209ENST00000557750 N4BP2Q86UW6 1770 aaPredicted RBP15.79■□□□□ 0.12
RCCD1-209ENST00000557750 GYS1P13807 737 aa15.79■□□□□ 0.12
RCCD1-209ENST00000557750 DPEP1P16444 411 aa15.79■□□□□ 0.12
RCCD1-209ENST00000557750 COL5A3P25940 1745 aaPredicted RBP15.79■□□□□ 0.12
RCCD1-209ENST00000557750 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
RCCD1-209ENST00000557750 ADRA2BP18089 450 aa15.78■□□□□ 0.12
RCCD1-209ENST00000557750 SOS1Q07889 1333 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms