RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 H0YIN7 160 aa13.25□□□□□ -0.29
PABPN1-208ENST00000557702 ZPR1O75312 459 aa13.25□□□□□ -0.29
PABPN1-208ENST00000557702 C2CD5Q86YS7 1000 aa13.25□□□□□ -0.29
PABPN1-208ENST00000557702 GGNBP2Q9H3C7 697 aa13.25□□□□□ -0.29
PABPN1-208ENST00000557702 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
PABPN1-208ENST00000557702 FYB1O15117 783 aa13.24□□□□□ -0.29
PABPN1-208ENST00000557702 TAF1DQ9H5J8 278 aaPredicted RBP13.24□□□□□ -0.29
PABPN1-208ENST00000557702 ABT1Q9ULW3 272 aaKnown RBP13.24□□□□□ -0.29
PABPN1-208ENST00000557702 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
PABPN1-208ENST00000557702 EAPPQ56P03 285 aaPredicted RBP13.23□□□□□ -0.29
PABPN1-208ENST00000557702 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
PABPN1-208ENST00000557702 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
PABPN1-208ENST00000557702 MCOLN1Q9GZU1 580 aa13.22□□□□□ -0.29
PABPN1-208ENST00000557702 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 C21orf2O43822 256 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.29
PABPN1-208ENST00000557702 SERPINB2P05120 415 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 ECE1P42892 770 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 NFIXQ14938 502 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.292e-8■■□□□ 11.7
PABPN1-208ENST00000557702 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
PABPN1-208ENST00000557702 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
PABPN1-208ENST00000557702 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
PABPN1-208ENST00000557702 LTBP3Q9NS15 1303 aa13.2□□□□□ -0.3
PABPN1-208ENST00000557702 COL5A3P25940 1745 aaPredicted RBP13.2□□□□□ -0.3
PABPN1-208ENST00000557702 HSP90AB1P08238 724 aaKnown RBP13.2□□□□□ -0.3
PABPN1-208ENST00000557702 PAXIP1Q6ZW49 1069 aaPredicted RBP13.2□□□□□ -0.3
PABPN1-208ENST00000557702 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
PABPN1-208ENST00000557702 NCAPD2Q15021 1401 aa13.2□□□□□ -0.3
PABPN1-208ENST00000557702 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
PABPN1-208ENST00000557702 CABP4P57796 275 aa13.19□□□□□ -0.3
PABPN1-208ENST00000557702 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
PABPN1-208ENST00000557702 CAPNS2Q96L46 248 aa13.19□□□□□ -0.3
PABPN1-208ENST00000557702 EYA1Q99502 592 aa13.19□□□□□ -0.3
PABPN1-208ENST00000557702 TNRC18O15417 2968 aaPredicted RBP13.18□□□□□ -0.3
PABPN1-208ENST00000557702 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
PABPN1-208ENST00000557702 GRM1Q13255 1194 aa13.18□□□□□ -0.3
PABPN1-208ENST00000557702 INTS5Q6P9B9 1019 aaKnown RBP13.18□□□□□ -0.3
PABPN1-208ENST00000557702 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
PABPN1-208ENST00000557702 HACL1Q9UJ83 578 aa13.18□□□□□ -0.3
PABPN1-208ENST00000557702 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
PABPN1-208ENST00000557702 PDZRN3Q9UPQ7 1066 aa13.18□□□□□ -0.3
PABPN1-208ENST00000557702 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
PABPN1-208ENST00000557702 EPHX2P34913 555 aa13.17□□□□□ -0.3
PABPN1-208ENST00000557702 MAP1SQ66K74 1059 aaPredicted RBP13.17□□□□□ -0.3
PABPN1-208ENST00000557702 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
PABPN1-208ENST00000557702 SCN4AP35499 1836 aa13.16□□□□□ -0.3
PABPN1-208ENST00000557702 CA12O43570 354 aa13.16□□□□□ -0.3
PABPN1-208ENST00000557702 PDE6BP35913 854 aa13.16□□□□□ -0.3
PABPN1-208ENST00000557702 DGKZQ13574 1117 aa13.16□□□□□ -0.3
PABPN1-208ENST00000557702 CYP4F22Q6NT55 531 aa13.16□□□□□ -0.3
PABPN1-208ENST00000557702 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
PABPN1-208ENST00000557702 DLEC1Q9Y238 1755 aa13.15□□□□□ -0.3
PABPN1-208ENST00000557702 MAP2K2P36507 400 aa13.15□□□□□ -0.3
PABPN1-208ENST00000557702 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
PABPN1-208ENST00000557702 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
PABPN1-208ENST00000557702 SOGA3Q5TF21 947 aa13.14□□□□□ -0.31
PABPN1-208ENST00000557702 FER1L6Q2WGJ9 1857 aa13.14□□□□□ -0.31
PABPN1-208ENST00000557702 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
PABPN1-208ENST00000557702 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
PABPN1-208ENST00000557702 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
PABPN1-208ENST00000557702 CNKSR1Q969H4 720 aa13.13□□□□□ -0.31
PABPN1-208ENST00000557702 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
PABPN1-208ENST00000557702 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
PABPN1-208ENST00000557702 CASP8AP2Q9UKL3 1982 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 MTHFSP49914 203 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
PABPN1-208ENST00000557702 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
PABPN1-208ENST00000557702 AOC2O75106 756 aa13.11□□□□□ -0.31
PABPN1-208ENST00000557702 SOX10P56693 466 aa13.11□□□□□ -0.31
PABPN1-208ENST00000557702 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
PABPN1-208ENST00000557702 ZNF541Q9H0D2 1346 aa13.11□□□□□ -0.31
PABPN1-208ENST00000557702 COL15A1P39059 1388 aa13.1□□□□□ -0.31
PABPN1-208ENST00000557702 ADAMTS7Q9UKP4 1686 aa13.1□□□□□ -0.31
PABPN1-208ENST00000557702 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
PABPN1-208ENST00000557702 TESK2Q96S53 571 aa13.1□□□□□ -0.31
PABPN1-208ENST00000557702 TLL2Q9Y6L7 1015 aa13.1□□□□□ -0.31
PABPN1-208ENST00000557702 RNF123Q5XPI4 1314 aa13.1□□□□□ -0.31
PABPN1-208ENST00000557702 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
PABPN1-208ENST00000557702 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
PABPN1-208ENST00000557702 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
PABPN1-208ENST00000557702 PRPF40BQ6NWY9 871 aaKnown RBP13.09□□□□□ -0.31
PABPN1-208ENST00000557702 THSD7BQ9C0I4 1608 aa13.09□□□□□ -0.31
PABPN1-208ENST00000557702 ADAMTSL1Q8N6G6 1762 aa13.08□□□□□ -0.32
PABPN1-208ENST00000557702 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.32
PABPN1-208ENST00000557702 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
PABPN1-208ENST00000557702 CST9Q5W186 159 aa13.08□□□□□ -0.32
PABPN1-208ENST00000557702 GCC1Q96CN9 775 aa13.08□□□□□ -0.32
PABPN1-208ENST00000557702 FMR1Q06787 632 aaKnown RBP eCLIP13.07□□□□□ -0.32
PABPN1-208ENST00000557702 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
PABPN1-208ENST00000557702 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
PABPN1-208ENST00000557702 CCDC24Q8N4L8 307 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms