RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 IL1RAPL2Q9NP60 686 aa14.24□□□□□ -0.13
VIPAS39-211ENST00000557658 UBE2HP62256 183 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 SSH3Q8TE77 659 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 PIBF1Q8WXW3 757 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 IL25Q9H293 177 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 USP25Q9UHP3 1055 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 MLECQ14165 292 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 MYRIPQ8NFW9 859 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 USP44Q9H0E7 712 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 ATP6V1DQ9Y5K8 247 aa14.23□□□□□ -0.13
VIPAS39-211ENST00000557658 IGSF1Q8N6C5 1336 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 SGSM2O43147 1006 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 PRIMPOLQ96LW4 560 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 TTC21AQ8NDW8 1320 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 STX6O43752 255 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 ADCY5O95622 1261 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 TTC14Q96N46 770 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 EYA1Q99502 592 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 LIMCH1Q9UPQ0 1083 aa14.22□□□□□ -0.13
VIPAS39-211ENST00000557658 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.13
VIPAS39-211ENST00000557658 GNAT3A8MTJ3 354 aa14.21□□□□□ -0.14
VIPAS39-211ENST00000557658 SURF6O75683 361 aaKnown RBP14.21□□□□□ -0.14
VIPAS39-211ENST00000557658 AMPHP49418 695 aa14.21□□□□□ -0.14
VIPAS39-211ENST00000557658 NOLC1Q14978 699 aaKnown RBP eCLIP14.21□□□□□ -0.14
VIPAS39-211ENST00000557658 CNTROBQ8N137 903 aa14.21□□□□□ -0.14
VIPAS39-211ENST00000557658 SMC3Q9UQE7 1217 aa14.21□□□□□ -0.14
VIPAS39-211ENST00000557658 CEP170BQ9Y4F5 1589 aaPredicted RBP14.21□□□□□ -0.14
VIPAS39-211ENST00000557658 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 SYT1P21579 422 aa14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 AK2P54819 239 aa14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 PI4K2BQ8TCG2 481 aa14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 RHPN1Q8TCX5 695 aa14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 MAP4K4O95819 1239 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 F13A1P00488 732 aa14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 PPP1R42Q7Z4L9 355 aa14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 ZNF830Q96NB3 372 aaPredicted RBP14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 LSG1Q9H089 658 aaKnown RBP14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 BABAM1Q9NWV8 329 aa14.2□□□□□ -0.14
VIPAS39-211ENST00000557658 POLA2Q14181 598 aa14.19□□□□□ -0.14
VIPAS39-211ENST00000557658 KIF1BPQ96EK5 621 aa14.19□□□□□ -0.14
VIPAS39-211ENST00000557658 KDM4AO75164 1064 aa14.19□□□□□ -0.14
VIPAS39-211ENST00000557658 RUFY3Q7L099 469 aa14.19□□□□□ -0.14
VIPAS39-211ENST00000557658 MPNDQ8N594 471 aa14.19□□□□□ -0.14
VIPAS39-211ENST00000557658 ESF1Q9H501 851 aaKnown RBP14.19□□□□□ -0.14
VIPAS39-211ENST00000557658 TTC12Q9H892 705 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-211ENST00000557658 FIBPO43427 364 aa14.18□□□□□ -0.14
VIPAS39-211ENST00000557658 TAF7Q15545 349 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-211ENST00000557658 TPRNQ4KMQ1 711 aa14.17□□□□□ -0.14
VIPAS39-211ENST00000557658 RASEFQ8IZ41 740 aa14.17□□□□□ -0.14
VIPAS39-211ENST00000557658 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
VIPAS39-211ENST00000557658 SRGAP3O43295 1099 aa14.17□□□□□ -0.14
VIPAS39-211ENST00000557658 FAM69CQ0P6D2 419 aa14.17□□□□□ -0.14
VIPAS39-211ENST00000557658 HDGFL1Q5TGJ6 251 aa14.17□□□□□ -0.14
VIPAS39-211ENST00000557658 SPTLC3Q9NUV7 552 aa14.17□□□□□ -0.14
VIPAS39-211ENST00000557658 MAP3K5Q99683 1374 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 ADAMTS13Q76LX8 1427 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 SMAP1Q8IYB5 467 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 CCDC94Q9BW85 323 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 TPM3P06753 285 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 CASTP20810 708 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 CWC27Q6UX04 472 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 RUFY2Q8WXA3 655 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 ZSCAN31Q96LW9 406 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 FUCA2Q9BTY2 467 aa14.16□□□□□ -0.14
VIPAS39-211ENST00000557658 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 IL17REQ8NFR9 667 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 LARP6Q9BRS8 491 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 TNRQ92752 1358 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 CRYBG1Q9Y4K1 1723 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 GJB2P29033 226 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 GIMAP6Q6P9H5 292 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 ARID3AQ99856 593 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 PHAXQ9H814 394 aaKnown RBP14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 SH2B1Q9NRF2 756 aaPredicted RBP14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 DIAPH3Q9NSV4 1193 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 HYPKQ9NX55 129 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.14
VIPAS39-211ENST00000557658 GLRX3O76003 335 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 PLCB2Q00722 1185 aa14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 VPS53Q5VIR6 699 aa14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 UBR1Q8IWV7 1749 aa14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 USP42Q9H9J4 1324 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 SPG7Q9UQ90 795 aa14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 CCDC83Q8IWF9 413 aa14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
VIPAS39-211ENST00000557658 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms