RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 CA12O43570 354 aa18.88■□□□□ 0.61
TMEM260-215ENST00000557626 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
TMEM260-215ENST00000557626 FER1L6Q2WGJ9 1857 aa18.87■□□□□ 0.61
TMEM260-215ENST00000557626 ADAMTSL1Q8N6G6 1762 aa18.87■□□□□ 0.61
TMEM260-215ENST00000557626 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
TMEM260-215ENST00000557626 ATG3Q9NT62 314 aa18.87■□□□□ 0.61
TMEM260-215ENST00000557626 CYP4F22Q6NT55 531 aa18.86■□□□□ 0.61
TMEM260-215ENST00000557626 CNTROBQ8N137 903 aa18.86■□□□□ 0.61
TMEM260-215ENST00000557626 L3MBTL3Q96JM7 780 aaPredicted RBP18.86■□□□□ 0.61
TMEM260-215ENST00000557626 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
TMEM260-215ENST00000557626 FBLN1P23142 703 aa18.85■□□□□ 0.61
TMEM260-215ENST00000557626 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
TMEM260-215ENST00000557626 MAP1SQ66K74 1059 aaPredicted RBP18.84■□□□□ 0.61
TMEM260-215ENST00000557626 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
TMEM260-215ENST00000557626 SLC4A9Q96Q91 983 aa18.84■□□□□ 0.61
TMEM260-215ENST00000557626 HABP4Q5JVS0 413 aaKnown RBP18.83■□□□□ 0.6
TMEM260-215ENST00000557626 COG3Q96JB2 828 aa18.83■□□□□ 0.6
TMEM260-215ENST00000557626 TM4SF1P30408 202 aa18.82■□□□□ 0.6
TMEM260-215ENST00000557626 MAP2K2P36507 400 aa18.82■□□□□ 0.6
TMEM260-215ENST00000557626 C2CD5Q86YS7 1000 aa18.82■□□□□ 0.6
TMEM260-215ENST00000557626 AOC2O75106 756 aa18.81■□□□□ 0.6
TMEM260-215ENST00000557626 NBPF15Q8N660 670 aa18.81■□□□□ 0.6
TMEM260-215ENST00000557626 TAOK3Q9H2K8 898 aa18.81■□□□□ 0.6
TMEM260-215ENST00000557626 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMEM260-215ENST00000557626 HACL1Q9UJ83 578 aa18.81■□□□□ 0.6
TMEM260-215ENST00000557626 NRXN2Q9P2S2 1712 aa18.8■□□□□ 0.6
TMEM260-215ENST00000557626 H0YIN7 160 aa18.8■□□□□ 0.6
TMEM260-215ENST00000557626 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
TMEM260-215ENST00000557626 A0A1W2PP64 1363 aa18.8■□□□□ 0.6
TMEM260-215ENST00000557626 LTBP3Q9NS15 1303 aa18.79■□□□□ 0.6
TMEM260-215ENST00000557626 C21orf2O43822 256 aa18.79■□□□□ 0.6
TMEM260-215ENST00000557626 EPHX2P34913 555 aa18.79■□□□□ 0.6
TMEM260-215ENST00000557626 RRS1Q15050 365 aaKnown RBP18.79■□□□□ 0.6
TMEM260-215ENST00000557626 PNMA8AQ86V59 439 aaPredicted RBP18.79■□□□□ 0.6
TMEM260-215ENST00000557626 TERF2IPQ9NYB0 399 aa18.79■□□□□ 0.6
TMEM260-215ENST00000557626 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
TMEM260-215ENST00000557626 TRPM7Q96QT4 1865 aa18.77■□□□□ 0.6
TMEM260-215ENST00000557626 DLL1O00548 723 aa18.76■□□□□ 0.59
TMEM260-215ENST00000557626 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
TMEM260-215ENST00000557626 ZPR1O75312 459 aa18.75■□□□□ 0.59
TMEM260-215ENST00000557626 BRPF1P55201 1214 aaPredicted RBP18.75■□□□□ 0.59
TMEM260-215ENST00000557626 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
TMEM260-215ENST00000557626 USPL1Q5W0Q7 1092 aa18.74■□□□□ 0.59
TMEM260-215ENST00000557626 ZNF622Q969S3 477 aaKnown RBP eCLIP18.74■□□□□ 0.59
TMEM260-215ENST00000557626 TLL2Q9Y6L7 1015 aa18.74■□□□□ 0.59
TMEM260-215ENST00000557626 A0A0C4DFX4 3053 aa18.73■□□□□ 0.59
TMEM260-215ENST00000557626 ADAMTS7Q9UKP4 1686 aa18.73■□□□□ 0.59
TMEM260-215ENST00000557626 INSRP06213 1382 aa18.73■□□□□ 0.59
TMEM260-215ENST00000557626 CARMIL3Q8ND23 1372 aa18.72■□□□□ 0.59
TMEM260-215ENST00000557626 NFIXQ14938 502 aa18.72■□□□□ 0.59
TMEM260-215ENST00000557626 HSP90AB2PQ58FF8 381 aa18.72■□□□□ 0.59
TMEM260-215ENST00000557626 IFNL2Q8IZJ0 200 aa18.72■□□□□ 0.59
TMEM260-215ENST00000557626 RNF123Q5XPI4 1314 aa18.72■□□□□ 0.59
TMEM260-215ENST00000557626 SERPINB2P05120 415 aa18.71■□□□□ 0.59
TMEM260-215ENST00000557626 PHKG2P15735 406 aa18.71■□□□□ 0.59
TMEM260-215ENST00000557626 FMR1Q06787 632 aaKnown RBP eCLIP18.71■□□□□ 0.59
TMEM260-215ENST00000557626 ZNF541Q9H0D2 1346 aa18.71■□□□□ 0.59
TMEM260-215ENST00000557626 CUL9Q8IWT3 2517 aa18.7■□□□□ 0.58
TMEM260-215ENST00000557626 FXR1P51114 621 aaKnown RBP eCLIP18.7■□□□□ 0.58
TMEM260-215ENST00000557626 CACNA1SQ13698 1873 aa18.7■□□□□ 0.58
TMEM260-215ENST00000557626 CIAPIN1Q6FI81 312 aa18.7■□□□□ 0.58
TMEM260-215ENST00000557626 COL11A2P13942 1736 aaPredicted RBP18.69■□□□□ 0.58
TMEM260-215ENST00000557626 CST9Q5W186 159 aa18.68■□□□□ 0.58
TMEM260-215ENST00000557626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
TMEM260-215ENST00000557626 ANKRD31Q8N7Z5 1873 aa18.68■□□□□ 0.58
TMEM260-215ENST00000557626 FLT4P35916 1363 aa18.68■□□□□ 0.58
TMEM260-215ENST00000557626 MKI67P46013 3256 aaKnown RBP18.66■□□□□ 0.58
TMEM260-215ENST00000557626 PTCD1O75127 700 aaKnown RBP18.66■□□□□ 0.58
TMEM260-215ENST00000557626 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
TMEM260-215ENST00000557626 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
TMEM260-215ENST00000557626 TJP1Q07157 1748 aa18.66■□□□□ 0.58
TMEM260-215ENST00000557626 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
TMEM260-215ENST00000557626 SLX4Q8IY92 1834 aa18.65■□□□□ 0.58
TMEM260-215ENST00000557626 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
TMEM260-215ENST00000557626 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
TMEM260-215ENST00000557626 TRAF5O00463 557 aa18.64■□□□□ 0.57
TMEM260-215ENST00000557626 PDE6BP35913 854 aa18.64■□□□□ 0.57
TMEM260-215ENST00000557626 SAPCD2Q86UD0 394 aa18.64■□□□□ 0.57
TMEM260-215ENST00000557626 SZT2Q5T011 3432 aa18.64■□□□□ 0.57
TMEM260-215ENST00000557626 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
TMEM260-215ENST00000557626 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
TMEM260-215ENST00000557626 INTS5Q6P9B9 1019 aaKnown RBP18.62■□□□□ 0.57
TMEM260-215ENST00000557626 BICDL1Q6ZP65 573 aa18.62■□□□□ 0.57
TMEM260-215ENST00000557626 HHIPL1Q96JK4 782 aa18.62■□□□□ 0.57
TMEM260-215ENST00000557626 NARFQ9UHQ1 456 aa18.62■□□□□ 0.57
TMEM260-215ENST00000557626 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
TMEM260-215ENST00000557626 KIF24Q5T7B8 1368 aa18.61■□□□□ 0.57
TMEM260-215ENST00000557626 PRPF40BQ6NWY9 871 aaKnown RBP18.61■□□□□ 0.57
TMEM260-215ENST00000557626 CNKSR1Q969H4 720 aa18.61■□□□□ 0.57
TMEM260-215ENST00000557626 SOS1Q07889 1333 aaPredicted RBP18.6■□□□□ 0.57
TMEM260-215ENST00000557626 CTU1Q7Z7A3 348 aaKnown RBP18.6■□□□□ 0.57
TMEM260-215ENST00000557626 GPC2Q8N158 579 aa18.6■□□□□ 0.57
TMEM260-215ENST00000557626 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
TMEM260-215ENST00000557626 LMOD1P29536 600 aaPredicted RBP18.59■□□□□ 0.57
TMEM260-215ENST00000557626 NOGQ13253 232 aa18.59■□□□□ 0.57
TMEM260-215ENST00000557626 SLC17A8Q8NDX2 589 aa18.59■□□□□ 0.57
TMEM260-215ENST00000557626 ZNF277Q9NRM2 450 aaPredicted RBP18.59■□□□□ 0.57
TMEM260-215ENST00000557626 HPS5Q9UPZ3 1129 aa18.59■□□□□ 0.57
TMEM260-215ENST00000557626 COL15A1P39059 1388 aa18.58■□□□□ 0.57
TMEM260-215ENST00000557626 CELF2O95319 508 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms