RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 STARD3NLO95772 234 aa18.21■□□□□ 0.51
RIPK3-206ENST00000557624 EZH2Q15910 746 aaKnown RBP18.21■□□□□ 0.51
RIPK3-206ENST00000557624 SOS1Q07889 1333 aaPredicted RBP18.21■□□□□ 0.51
RIPK3-206ENST00000557624 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
RIPK3-206ENST00000557624 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.51
RIPK3-206ENST00000557624 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
RIPK3-206ENST00000557624 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
RIPK3-206ENST00000557624 LINC00116Q8NCU8 138 aa18.2■□□□□ 0.5
RIPK3-206ENST00000557624 CAMKK2Q96RR4 588 aa18.2■□□□□ 0.5
RIPK3-206ENST00000557624 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
RIPK3-206ENST00000557624 PIP4K2AP48426 406 aaPredicted RBP18.2■□□□□ 0.5
RIPK3-206ENST00000557624 CCDC30Q5VVM6 783 aa18.19■□□□□ 0.5
RIPK3-206ENST00000557624 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
RIPK3-206ENST00000557624 A1BGP04217 495 aa18.18■□□□□ 0.5
RIPK3-206ENST00000557624 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
RIPK3-206ENST00000557624 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
RIPK3-206ENST00000557624 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
RIPK3-206ENST00000557624 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
RIPK3-206ENST00000557624 ANXA1P04083 346 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 CHMP4AQ9BY43 222 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 C4BP0C0L5 1744 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 RREB1Q92766 1687 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 MYL6BP14649 208 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
RIPK3-206ENST00000557624 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
RIPK3-206ENST00000557624 PROSER3Q2NL68 480 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 SSH1Q8WYL5 1049 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
RIPK3-206ENST00000557624 ZNF330Q9Y3S2 320 aaPredicted RBP18.16■□□□□ 0.5
RIPK3-206ENST00000557624 CNTNAP4Q9C0A0 1308 aa18.15■□□□□ 0.5
RIPK3-206ENST00000557624 NBPF26B4DH59 902 aa18.15■□□□□ 0.5
RIPK3-206ENST00000557624 NBPF14Q5TI25 921 aa18.15■□□□□ 0.5
RIPK3-206ENST00000557624 NBPF10Q6P3W6 841 aaKnown RBP18.15■□□□□ 0.5
RIPK3-206ENST00000557624 INTS5Q6P9B9 1019 aaKnown RBP18.15■□□□□ 0.5
RIPK3-206ENST00000557624 NBPF15Q8N660 670 aa18.15■□□□□ 0.5
RIPK3-206ENST00000557624 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
RIPK3-206ENST00000557624 PDIA6Q15084 440 aa18.14■□□□□ 0.49
RIPK3-206ENST00000557624 AK7Q96M32 723 aa18.14■□□□□ 0.49
RIPK3-206ENST00000557624 ERBB4Q15303 1308 aa18.14■□□□□ 0.49
RIPK3-206ENST00000557624 NUP188Q5SRE5 1749 aa18.13■□□□□ 0.49
RIPK3-206ENST00000557624 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
RIPK3-206ENST00000557624 GNPATO15228 680 aa18.13■□□□□ 0.49
RIPK3-206ENST00000557624 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
RIPK3-206ENST00000557624 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
RIPK3-206ENST00000557624 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
RIPK3-206ENST00000557624 BCAR3O75815 825 aa18.12■□□□□ 0.49
RIPK3-206ENST00000557624 HMGB2P26583 209 aaKnown RBP18.12■□□□□ 0.49
RIPK3-206ENST00000557624 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
RIPK3-206ENST00000557624 ZNF827Q17R98 1081 aa18.11■□□□□ 0.49
RIPK3-206ENST00000557624 MRPL50Q8N5N7 158 aaKnown RBP18.11■□□□□ 0.49
RIPK3-206ENST00000557624 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
RIPK3-206ENST00000557624 SMIM5Q71RC9 77 aa18.1■□□□□ 0.49
RIPK3-206ENST00000557624 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
RIPK3-206ENST00000557624 PHAXQ9H814 394 aaKnown RBP18.1■□□□□ 0.49
RIPK3-206ENST00000557624 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
RIPK3-206ENST00000557624 PHF14O94880 888 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
RIPK3-206ENST00000557624 AIMP1Q12904 312 aaKnown RBP18.09■□□□□ 0.49
RIPK3-206ENST00000557624 G2E3Q7L622 706 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 ARXQ96QS3 562 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
RIPK3-206ENST00000557624 UBR3Q6ZT12 1888 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 LRP10Q7Z4F1 713 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 XAGE3Q8WTP9 111 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 TFCP2L1Q9NZI6 479 aa18.09■□□□□ 0.49
RIPK3-206ENST00000557624 COL15A1P39059 1388 aa18.08■□□□□ 0.48
RIPK3-206ENST00000557624 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.48
RIPK3-206ENST00000557624 FLIIQ13045 1269 aa18.08■□□□□ 0.48
RIPK3-206ENST00000557624 FRAT1Q92837 279 aaPredicted RBP18.08■□□□□ 0.48
RIPK3-206ENST00000557624 STK32BQ9NY57 414 aa18.08■□□□□ 0.48
RIPK3-206ENST00000557624 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
RIPK3-206ENST00000557624 KIF16BQ96L93 1317 aa18.07■□□□□ 0.48
RIPK3-206ENST00000557624 TUBGCP6Q96RT7 1819 aa18.07■□□□□ 0.48
RIPK3-206ENST00000557624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
RIPK3-206ENST00000557624 FKBP5Q13451 457 aaPredicted RBP18.06■□□□□ 0.48
RIPK3-206ENST00000557624 TTLL7Q6ZT98 887 aa18.06■□□□□ 0.48
RIPK3-206ENST00000557624 NOB1Q9ULX3 412 aaKnown RBP18.06■□□□□ 0.48
RIPK3-206ENST00000557624 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
RIPK3-206ENST00000557624 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
RIPK3-206ENST00000557624 BRPF1P55201 1214 aaPredicted RBP18.05■□□□□ 0.48
RIPK3-206ENST00000557624 KIF6Q6ZMV9 814 aa18.05■□□□□ 0.48
RIPK3-206ENST00000557624 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
RIPK3-206ENST00000557624 SSFA2P28290 1259 aa18.04■□□□□ 0.48
RIPK3-206ENST00000557624 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
RIPK3-206ENST00000557624 C4AP0C0L4 1744 aa18.04■□□□□ 0.48
RIPK3-206ENST00000557624 A0A087WZG4 1122 aa18.03■□□□□ 0.48
RIPK3-206ENST00000557624 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
RIPK3-206ENST00000557624 ADRA2BP18089 450 aa18.03■□□□□ 0.48
RIPK3-206ENST00000557624 ARHGEF1Q92888 912 aaKnown RBP18.03■□□□□ 0.48
RIPK3-206ENST00000557624 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
RIPK3-206ENST00000557624 PTPRCP08575 1304 aa18.03■□□□□ 0.48
RIPK3-206ENST00000557624 MSH5O43196 834 aa18.02■□□□□ 0.48
RIPK3-206ENST00000557624 PLIN1O60240 522 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms