RNA–Protein interactions for RNA: ENST00000557555.1

ITGA7-220, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-220ENST00000557555 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.68
ITGA7-220ENST00000557555 ZNF316A6NFI3 1004 aaPredicted RBP19.26■□□□□ 0.67
ITGA7-220ENST00000557555 GPR162Q16538 588 aa19.26■□□□□ 0.67
ITGA7-220ENST00000557555 COL15A1P39059 1388 aa19.26■□□□□ 0.67
ITGA7-220ENST00000557555 ZPR1O75312 459 aa19.25■□□□□ 0.67
ITGA7-220ENST00000557555 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
ITGA7-220ENST00000557555 FKBP8Q14318 412 aa19.24■□□□□ 0.67
ITGA7-220ENST00000557555 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
ITGA7-220ENST00000557555 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
ITGA7-220ENST00000557555 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
ITGA7-220ENST00000557555 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
ITGA7-220ENST00000557555 NARFQ9UHQ1 456 aa19.23■□□□□ 0.67
ITGA7-220ENST00000557555 PARP3Q9Y6F1 533 aa19.23■□□□□ 0.67
ITGA7-220ENST00000557555 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
ITGA7-220ENST00000557555 YY1P25490 414 aa19.22■□□□□ 0.67
ITGA7-220ENST00000557555 RIPK4P57078 832 aa19.22■□□□□ 0.67
ITGA7-220ENST00000557555 PNISRQ8TF01 805 aaKnown RBP19.22■□□□□ 0.67
ITGA7-220ENST00000557555 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
ITGA7-220ENST00000557555 MIS18AQ9NYP9 233 aa19.22■□□□□ 0.67
ITGA7-220ENST00000557555 A0A087WZG4 1122 aa19.21■□□□□ 0.67
ITGA7-220ENST00000557555 A1BGP04217 495 aa19.21■□□□□ 0.67
ITGA7-220ENST00000557555 TMPOP42166 694 aaKnown RBP19.21■□□□□ 0.67
ITGA7-220ENST00000557555 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
ITGA7-220ENST00000557555 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
ITGA7-220ENST00000557555 USP16Q9Y5T5 823 aa19.21■□□□□ 0.67
ITGA7-220ENST00000557555 C10orf71Q711Q0 1435 aa19.2■□□□□ 0.66
ITGA7-220ENST00000557555 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
ITGA7-220ENST00000557555 YBX3P16989 372 aaKnown RBP eCLIP19.2■□□□□ 0.66
ITGA7-220ENST00000557555 TM4SF1P30408 202 aa19.2■□□□□ 0.66
ITGA7-220ENST00000557555 IL6STP40189 918 aaPredicted RBP19.2■□□□□ 0.66
ITGA7-220ENST00000557555 DDR1Q08345 913 aa19.2■□□□□ 0.66
ITGA7-220ENST00000557555 RUNDC1Q96C34 613 aa19.2■□□□□ 0.66
ITGA7-220ENST00000557555 KIF13BQ9NQT8 1826 aa19.19■□□□□ 0.66
ITGA7-220ENST00000557555 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
ITGA7-220ENST00000557555 LMOD3Q0VAK6 560 aa19.18■□□□□ 0.66
ITGA7-220ENST00000557555 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
ITGA7-220ENST00000557555 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
ITGA7-220ENST00000557555 GRIN3BO60391 1043 aa19.17■□□□□ 0.66
ITGA7-220ENST00000557555 TGFB2P61812 414 aa19.17■□□□□ 0.66
ITGA7-220ENST00000557555 RRP7AQ9Y3A4 280 aaKnown RBP19.17■□□□□ 0.66
ITGA7-220ENST00000557555 ZNF330Q9Y3S2 320 aaPredicted RBP19.17■□□□□ 0.66
ITGA7-220ENST00000557555 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
ITGA7-220ENST00000557555 EIF4A1P60842 406 aaKnown RBP19.16■□□□□ 0.66
ITGA7-220ENST00000557555 NFIXQ14938 502 aa19.16■□□□□ 0.66
ITGA7-220ENST00000557555 NPM2Q86SE8 214 aaKnown RBP19.16■□□□□ 0.66
ITGA7-220ENST00000557555 TBC1D2BQ9UPU7 963 aa19.16■□□□□ 0.66
ITGA7-220ENST00000557555 KIAA1551Q9HCM1 1747 aa19.15■□□□□ 0.66
ITGA7-220ENST00000557555 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
ITGA7-220ENST00000557555 UTRNP46939 3433 aa19.14■□□□□ 0.65
ITGA7-220ENST00000557555 CHD4Q14839 1912 aa19.14■□□□□ 0.65
ITGA7-220ENST00000557555 GIGYF1O75420 1035 aaPredicted RBP19.14■□□□□ 0.65
ITGA7-220ENST00000557555 PIP4K2AP48426 406 aaPredicted RBP19.14■□□□□ 0.65
ITGA7-220ENST00000557555 SCN7AQ01118 1682 aa19.14■□□□□ 0.65
ITGA7-220ENST00000557555 A0A0G2JLW4 131 aa19.13■□□□□ 0.65
ITGA7-220ENST00000557555 NBPF26B4DH59 902 aa19.13■□□□□ 0.65
ITGA7-220ENST00000557555 NBPF10Q6P3W6 841 aaKnown RBP19.13■□□□□ 0.65
ITGA7-220ENST00000557555 NBPF15Q8N660 670 aa19.13■□□□□ 0.65
ITGA7-220ENST00000557555 BABAM1Q9NWV8 329 aa19.13■□□□□ 0.65
ITGA7-220ENST00000557555 TSPYL4Q9UJ04 414 aa19.13■□□□□ 0.65
ITGA7-220ENST00000557555 WWC3Q9ULE0 1092 aa19.13■□□□□ 0.65
ITGA7-220ENST00000557555 LAMB4A4D0S4 1761 aa19.12■□□□□ 0.65
ITGA7-220ENST00000557555 N4BP2Q86UW6 1770 aaPredicted RBP19.12■□□□□ 0.65
ITGA7-220ENST00000557555 CAMTA2O94983 1202 aa19.12■□□□□ 0.65
ITGA7-220ENST00000557555 DPEP1P16444 411 aa19.12■□□□□ 0.65
ITGA7-220ENST00000557555 DZIP3Q86Y13 1208 aaKnown RBP19.12■□□□□ 0.65
ITGA7-220ENST00000557555 TRIM35Q9UPQ4 493 aa19.12■□□□□ 0.65
ITGA7-220ENST00000557555 GOLGB1Q14789 3259 aaKnown RBP19.12■□□□□ 0.65
ITGA7-220ENST00000557555 SERPINB2P05120 415 aa19.11■□□□□ 0.65
ITGA7-220ENST00000557555 CCDC184Q52MB2 194 aa19.11■□□□□ 0.65
ITGA7-220ENST00000557555 BICDL1Q6ZP65 573 aa19.11■□□□□ 0.65
ITGA7-220ENST00000557555 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
ITGA7-220ENST00000557555 ANP32CO43423 234 aa19.1■□□□□ 0.65
ITGA7-220ENST00000557555 TBC1D9BQ66K14 1250 aa19.1■□□□□ 0.65
ITGA7-220ENST00000557555 AFDNP55196 1824 aaKnown RBP19.09■□□□□ 0.65
ITGA7-220ENST00000557555 KCNA3P22001 575 aa19.09■□□□□ 0.65
ITGA7-220ENST00000557555 BCORQ6W2J9 1755 aa19.09■□□□□ 0.65
ITGA7-220ENST00000557555 APAF1O14727 1248 aa19.07■□□□□ 0.64
ITGA7-220ENST00000557555 BCS1LQ9Y276 419 aa19.07■□□□□ 0.64
ITGA7-220ENST00000557555 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
ITGA7-220ENST00000557555 CHL1O00533 1208 aa19.06■□□□□ 0.64
ITGA7-220ENST00000557555 CHRNA5P30532 468 aa19.06■□□□□ 0.64
ITGA7-220ENST00000557555 CLEC4GQ6UXB4 293 aa19.06■□□□□ 0.64
ITGA7-220ENST00000557555 SETDB2Q96T68 719 aa19.06■□□□□ 0.64
ITGA7-220ENST00000557555 BRCA1P38398 1863 aaKnown RBP19.05■□□□□ 0.64
ITGA7-220ENST00000557555 RGL2O15211 777 aa19.05■□□□□ 0.64
ITGA7-220ENST00000557555 ZNF784Q8NCA9 323 aaPredicted RBP19.05■□□□□ 0.64
ITGA7-220ENST00000557555 PIM2Q9P1W9 311 aa19.05■□□□□ 0.64
ITGA7-220ENST00000557555 ZNF652Q9Y2D9 606 aa19.05■□□□□ 0.64
ITGA7-220ENST00000557555 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
ITGA7-220ENST00000557555 ERBB4Q15303 1308 aa19.04■□□□□ 0.64
ITGA7-220ENST00000557555 PRR5LQ6MZQ0 368 aa19.03■□□□□ 0.64
ITGA7-220ENST00000557555 NGEFQ8N5V2 710 aa19.03■□□□□ 0.64
ITGA7-220ENST00000557555 MRS2Q9HD23 443 aa19.03■□□□□ 0.64
ITGA7-220ENST00000557555 MYL6BP14649 208 aa19.02■□□□□ 0.64
ITGA7-220ENST00000557555 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.64
ITGA7-220ENST00000557555 DALRD3Q5D0E6 543 aaKnown RBP19.02■□□□□ 0.64
ITGA7-220ENST00000557555 CFAP44Q96MT7 982 aa19.02■□□□□ 0.64
ITGA7-220ENST00000557555 HLFQ16534 295 aa19.01■□□□□ 0.63
ITGA7-220ENST00000557555 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
ITGA7-220ENST00000557555 BRIP1Q9BX63 1249 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms