RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ARHGAP9Q9BRR9 750 aa7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 NOD1Q9Y239 953 aa7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 GRIN2AQ12879 1464 aa7.64□□□□□ -1.19
MTHFD1-216ENST00000557539 ANKRD33BA6NCL7 494 aa7.64□□□□□ -1.19
MTHFD1-216ENST00000557539 WFS1O76024 890 aa7.64□□□□□ -1.19
MTHFD1-216ENST00000557539 ABL1P00519 1130 aa7.64□□□□□ -1.19
MTHFD1-216ENST00000557539 KIFC2Q96AC6 838 aa7.64□□□□□ -1.19
MTHFD1-216ENST00000557539 CHIC2Q9UKJ5 165 aa7.64□□□□□ -1.19
MTHFD1-216ENST00000557539 WDR97A6NE52 1622 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 EPRSP07814 1512 aaKnown RBP7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 UHRF1BP1Q6BDS2 1440 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 ADH1CP00326 375 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 TIMP2P16035 220 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 OXLD1Q5BKU9 147 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 SH3RF1Q7Z6J0 888 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 ZBTB33Q86T24 672 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 LARGE2Q8N3Y3 721 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 PRIMPOLQ96LW4 560 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 DOLKQ9UPQ8 538 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 KIAA1024Q9UPX6 916 aa7.63□□□□□ -1.19
MTHFD1-216ENST00000557539 NR3C2P08235 984 aa7.62□□□□□ -1.19
MTHFD1-216ENST00000557539 GRM5P41594 1212 aa7.62□□□□□ -1.19
MTHFD1-216ENST00000557539 PRELPP51888 382 aa7.62□□□□□ -1.19
MTHFD1-216ENST00000557539 DZIP3Q86Y13 1208 aaKnown RBP7.62□□□□□ -1.19
MTHFD1-216ENST00000557539 C1orf216Q8TAB5 229 aa7.62□□□□□ -1.19
MTHFD1-216ENST00000557539 ANO2Q9NQ90 1003 aa7.62□□□□□ -1.19
MTHFD1-216ENST00000557539 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
MTHFD1-216ENST00000557539 H3BRB1 525 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 TERTO14746 1132 aaKnown RBP7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 ZBTB7BO15156 539 aaPredicted RBP7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 SEC13P55735 322 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 WDR4P57081 412 aaKnown RBP7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 GTF2IP78347 998 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 ZNF211Q13398 564 aaPredicted RBP7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 ARID5BQ14865 1188 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 SH3BP5LQ7L8J4 393 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 BPHLQ86WA6 291 aaPredicted RBP7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 NPAS4Q8IUM7 802 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 SIX5Q8N196 739 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 ZFP42Q96MM3 310 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 CCDC85AQ96PX6 553 aaPredicted RBP7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 C1QTNF2Q9BXJ5 285 aa7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 TUT1Q9H6E5 874 aaKnown RBP7.61□□□□□ -1.19
MTHFD1-216ENST00000557539 LRP5O75197 1615 aa7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 SFI1A8K8P3 1242 aa7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 DKK1O94907 266 aa7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 CEBPAP49715 358 aaPredicted RBP7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 AGERQ15109 404 aa7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 ZNF326Q5BKZ1 582 aaKnown RBP7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 CCDC102BQ68D86 513 aa7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 ZNF784Q8NCA9 323 aaPredicted RBP7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 CXXC1Q9P0U4 656 aaPredicted RBP7.6□□□□□ -1.19
MTHFD1-216ENST00000557539 LGR5O75473 907 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 PSME1Q06323 249 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 OCLNQ16625 522 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 MRPL14Q6P1L8 145 aaKnown RBP7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 TAS1R3Q7RTX0 852 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 GLYCTKQ8IVS8 523 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 TPCN2Q8NHX9 752 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 CARD14Q9BXL6 1004 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 EGFL7Q9UHF1 273 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 KIAA0556O60303 1618 aa7.59□□□□□ -1.19
MTHFD1-216ENST00000557539 MAGEB6P1A0A0J9YX57 407 aa7.58□□□□□ -1.2
MTHFD1-216ENST00000557539 GIGYF1O75420 1035 aaPredicted RBP7.58□□□□□ -1.2
MTHFD1-216ENST00000557539 TCF3P15923 654 aa7.58□□□□□ -1.2
MTHFD1-216ENST00000557539 ITPKCQ96DU7 683 aa7.58□□□□□ -1.2
MTHFD1-216ENST00000557539 ZFAND3Q9H8U3 227 aa7.58□□□□□ -1.2
MTHFD1-216ENST00000557539 PTPRKQ15262 1439 aa7.58□□□□□ -1.2
MTHFD1-216ENST00000557539 WIPF1O43516 503 aa7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 ICMTO60725 284 aa7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 ZIC2O95409 532 aaPredicted RBP7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 MAPK1P28482 360 aa7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 NR5A1Q13285 461 aa7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 MLECQ14165 292 aa7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 TRMT44Q8IYL2 757 aaKnown RBP7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 PURBQ96QR8 312 aaKnown RBP7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 HINFPQ9BQA5 517 aa7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 NCOA1Q15788 1441 aa7.57□□□□□ -1.2
MTHFD1-216ENST00000557539 RXRBP28702 533 aa7.56□□□□□ -1.2
MTHFD1-216ENST00000557539 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
MTHFD1-216ENST00000557539 MKNK1Q9BUB5 465 aa7.56□□□□□ -1.2
MTHFD1-216ENST00000557539 ABCC2Q92887 1545 aa7.56□□□□□ -1.2
MTHFD1-216ENST00000557539 TTBK1Q5TCY1 1321 aaPredicted RBP7.55□□□□□ -1.2
MTHFD1-216ENST00000557539 TAGLNQ01995 201 aaKnown RBP7.55□□□□□ -1.2
MTHFD1-216ENST00000557539 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
MTHFD1-216ENST00000557539 SEPT3Q9UH03 358 aa7.55□□□□□ -1.2
MTHFD1-216ENST00000557539 MAP4K5Q9Y4K4 846 aa7.55□□□□□ -1.2
MTHFD1-216ENST00000557539 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
MTHFD1-216ENST00000557539 PBRM1Q86U86 1689 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 POGZQ7Z3K3 1410 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 RAPGEF6Q8TEU7 1601 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 SOBPA7XYQ1 873 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 C21orf2O43822 256 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 FSHRP23945 695 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 VEGFBP49765 207 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 ERFEQ4G0M1 354 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 DCTN4Q9UJW0 460 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 PRDM2Q13029 1718 aa7.54□□□□□ -1.2
MTHFD1-216ENST00000557539 CD109Q6YHK3 1445 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms