RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 FOXD4L4Q8WXT5 416 aaPredicted RBP8.07□□□□□ -1.12
PRPF39-212ENST00000557477 EML1O00423 815 aa8.06□□□□□ -1.12
PRPF39-212ENST00000557477 POTEAQ6S8J7 498 aa8.06□□□□□ -1.12
PRPF39-212ENST00000557477 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
PRPF39-212ENST00000557477 GLYCTKQ8IVS8 523 aa8.06□□□□□ -1.12
PRPF39-212ENST00000557477 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
PRPF39-212ENST00000557477 HELQQ8TDG4 1101 aa8.06□□□□□ -1.12
PRPF39-212ENST00000557477 ZSCAN10Q96SZ4 725 aaPredicted RBP8.06□□□□□ -1.12
PRPF39-212ENST00000557477 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
PRPF39-212ENST00000557477 PARP3Q9Y6F1 533 aa8.06□□□□□ -1.12
PRPF39-212ENST00000557477 SPINT1O43278 529 aa8.05□□□□□ -1.12
PRPF39-212ENST00000557477 TEAD4Q15561 434 aa8.05□□□□□ -1.12
PRPF39-212ENST00000557477 ECM1Q16610 540 aa8.05□□□□□ -1.12
PRPF39-212ENST00000557477 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
PRPF39-212ENST00000557477 CABP1Q9NZU7 370 aa8.05□□□□□ -1.12
PRPF39-212ENST00000557477 SERTM1A2A2V5 107 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 AVPP01185 164 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 NOS2P35228 1153 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 CTSOP43234 321 aaPredicted RBP8.04□□□□□ -1.12
PRPF39-212ENST00000557477 FKBP4Q02790 459 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRPF39-212ENST00000557477 COX20Q5RI15 118 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 TMEM214Q6NUQ4 689 aaKnown RBP8.04□□□□□ -1.12
PRPF39-212ENST00000557477 C16orf46Q6P387 395 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 L3MBTL2Q969R5 705 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 NGLY1Q96IV0 654 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 GRIP2Q9C0E4 1043 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 CHMP3Q9Y3E7 222 aa8.04□□□□□ -1.12
PRPF39-212ENST00000557477 UPP2O95045 317 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 GPC1P35052 558 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
PRPF39-212ENST00000557477 HIRAP54198 1017 aaPredicted RBP8.03□□□□□ -1.12
PRPF39-212ENST00000557477 ARHGAP4P98171 946 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 SF3B2Q13435 895 aaKnown RBP8.03□□□□□ -1.12
PRPF39-212ENST00000557477 NOM1Q5C9Z4 860 aaKnown RBP8.03□□□□□ -1.12
PRPF39-212ENST00000557477 SLC27A3Q5K4L6 730 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 C6orf118Q5T5N4 469 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 RHBDD1Q8TEB9 315 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 POLMQ9NP87 494 aaPredicted RBP8.03□□□□□ -1.12
PRPF39-212ENST00000557477 LRFN2Q9ULH4 789 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 HCN4Q9Y3Q4 1203 aa8.03□□□□□ -1.12
PRPF39-212ENST00000557477 TNFRSF10BO14763 440 aa8.02□□□□□ -1.13
PRPF39-212ENST00000557477 AXIN1O15169 862 aa8.02□□□□□ -1.13
PRPF39-212ENST00000557477 BMP2P12643 396 aa8.02□□□□□ -1.13
PRPF39-212ENST00000557477 BMP1P13497 986 aa8.02□□□□□ -1.13
PRPF39-212ENST00000557477 MPSTP25325 297 aa8.02□□□□□ -1.13
PRPF39-212ENST00000557477 MARSP56192 900 aaKnown RBP8.02□□□□□ -1.13
PRPF39-212ENST00000557477 CTC1Q2NKJ3 1217 aa8.02□□□□□ -1.13
PRPF39-212ENST00000557477 DNAJC14Q6Y2X3 702 aaPredicted RBP8.02□□□□□ -1.13
PRPF39-212ENST00000557477 NIFKQ9BYG3 293 aaKnown RBP8.02□□□□□ -1.13
PRPF39-212ENST00000557477 PLA2G4AP47712 749 aa8.01□□□□□ -1.13
PRPF39-212ENST00000557477 C4orf17Q53FE4 359 aa8.01□□□□□ -1.13
PRPF39-212ENST00000557477 FAM26DQ5JW98 314 aa8.01□□□□□ -1.13
PRPF39-212ENST00000557477 MRPL14Q6P1L8 145 aaKnown RBP8.01□□□□□ -1.13
PRPF39-212ENST00000557477 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
PRPF39-212ENST00000557477 ALDH16A1Q8IZ83 802 aa8.01□□□□□ -1.13
PRPF39-212ENST00000557477 MYO19Q96H55 970 aa8.01□□□□□ -1.13
PRPF39-212ENST00000557477 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.01□□□□□ -1.13
PRPF39-212ENST00000557477 ST8SIA5O15466 376 aa8□□□□□ -1.13
PRPF39-212ENST00000557477 NPR3P17342 541 aa8□□□□□ -1.13
PRPF39-212ENST00000557477 GTF2E1P29083 439 aaPredicted RBP8□□□□□ -1.13
PRPF39-212ENST00000557477 TXLNAP40222 546 aa8□□□□□ -1.13
PRPF39-212ENST00000557477 GNASQ5JWF2 1037 aa8□□□□□ -1.13
PRPF39-212ENST00000557477 RNF217Q8TC41 542 aa8□□□□□ -1.13
PRPF39-212ENST00000557477 PHACTR1Q9C0D0 580 aa8□□□□□ -1.13
PRPF39-212ENST00000557477 PHKA2P46019 1235 aa7.99□□□□□ -1.13
PRPF39-212ENST00000557477 SMCPP49901 116 aaPredicted RBP7.99□□□□□ -1.13
PRPF39-212ENST00000557477 SCARF1Q14162 830 aa7.99□□□□□ -1.13
PRPF39-212ENST00000557477 TRIM46Q7Z4K8 759 aa7.99□□□□□ -1.13
PRPF39-212ENST00000557477 ZNF428Q96B54 188 aa7.99□□□□□ -1.13
PRPF39-212ENST00000557477 SPATA31C2B4DYI2 1134 aa7.98□□□□□ -1.13
PRPF39-212ENST00000557477 FAM13AO94988 1023 aa7.98□□□□□ -1.13
PRPF39-212ENST00000557477 DGKZQ13574 1117 aa7.98□□□□□ -1.13
PRPF39-212ENST00000557477 RTN1Q16799 776 aa7.98□□□□□ -1.13
PRPF39-212ENST00000557477 AAASQ9NRG9 546 aa7.98□□□□□ -1.13
PRPF39-212ENST00000557477 KLK14Q9P0G3 267 aa7.98□□□□□ -1.13
PRPF39-212ENST00000557477 STIM2Q9P246 746 aa7.98□□□□□ -1.13
PRPF39-212ENST00000557477 ZBTB39O15060 712 aa7.97□□□□□ -1.13
PRPF39-212ENST00000557477 MAPK1P28482 360 aa7.97□□□□□ -1.13
PRPF39-212ENST00000557477 EIF1AXP47813 144 aaKnown RBP7.97□□□□□ -1.13
PRPF39-212ENST00000557477 POU4F2Q12837 409 aa7.97□□□□□ -1.13
PRPF39-212ENST00000557477 PRICKLE2Q7Z3G6 844 aa7.97□□□□□ -1.13
PRPF39-212ENST00000557477 CRIPAKQ8N1N5 446 aa7.97□□□□□ -1.13
PRPF39-212ENST00000557477 KLRG1Q96E93 195 aa7.97□□□□□ -1.13
PRPF39-212ENST00000557477 TTLL8A6PVC2 850 aa7.96□□□□□ -1.14
PRPF39-212ENST00000557477 NBPF10Q6P3W6 841 aaKnown RBP7.96□□□□□ -1.14
PRPF39-212ENST00000557477 ETFBKMTQ8IXQ9 262 aa7.96□□□□□ -1.14
PRPF39-212ENST00000557477 AIDAQ96BJ3 306 aa7.96□□□□□ -1.14
PRPF39-212ENST00000557477 DCTN4Q9UJW0 460 aa7.96□□□□□ -1.14
PRPF39-212ENST00000557477 RHOQP17081 205 aa7.95□□□□□ -1.14
PRPF39-212ENST00000557477 C1orf53Q5VUE5 145 aa7.95□□□□□ -1.14
PRPF39-212ENST00000557477 LYSMD3Q7Z3D4 306 aa7.95□□□□□ -1.14
PRPF39-212ENST00000557477 ATCAYQ86WG3 371 aa7.95□□□□□ -1.14
PRPF39-212ENST00000557477 DACH1Q9UI36 760 aa7.95□□□□□ -1.14
PRPF39-212ENST00000557477 SOS2Q07890 1332 aaPredicted RBP7.95□□□□□ -1.14
PRPF39-212ENST00000557477 ANKRD33BA6NCL7 494 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 FIGNL2A6NMB9 653 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 ATP4AP20648 1035 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 NBPF1Q3BBV0 1214 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 C11orf91Q3C1V1 193 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms