RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 QPCTQ16769 361 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 CRIPAKQ8N1N5 446 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-247ENST00000557311 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 NUDT12Q9BQG2 462 aa7.42□□□□□ -1.22
ATXN3-247ENST00000557311 GMPR2Q9P2T1 348 aaKnown RBP7.42□□□□□ -1.22
ATXN3-247ENST00000557311 CHD2O14647 1828 aaKnown RBP7.42□□□□□ -1.22
ATXN3-247ENST00000557311 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-247ENST00000557311 PLEKHG3A1L390 1219 aa7.41□□□□□ -1.22
ATXN3-247ENST00000557311 DXOO77932 396 aaKnown RBP7.41□□□□□ -1.22
ATXN3-247ENST00000557311 MMP16P51512 607 aa7.41□□□□□ -1.22
ATXN3-247ENST00000557311 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
ATXN3-247ENST00000557311 ZNF326Q5BKZ1 582 aaKnown RBP7.41□□□□□ -1.22
ATXN3-247ENST00000557311 SH3D19Q5HYK7 790 aa7.41□□□□□ -1.22
ATXN3-247ENST00000557311 PRPF38BQ5VTL8 546 aaKnown RBP7.41□□□□□ -1.22
ATXN3-247ENST00000557311 CYP4X1Q8N118 509 aa7.41□□□□□ -1.22
ATXN3-247ENST00000557311 PROCA1Q8NCQ7 364 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-247ENST00000557311 METP08581 1390 aa7.41□□□□□ -1.22
ATXN3-247ENST00000557311 ATRNO75882 1429 aa7.41□□□□□ -1.22
ATXN3-247ENST00000557311 PTCH1Q13635 1447 aa7.41□□□□□ -1.22
ATXN3-247ENST00000557311 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-247ENST00000557311 TRPM2O94759 1503 aa7.4□□□□□ -1.22
ATXN3-247ENST00000557311 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
ATXN3-247ENST00000557311 SETBP1Q9Y6X0 1596 aa7.39□□□□□ -1.23
ATXN3-247ENST00000557311 ADGRL2O95490 1459 aa7.39□□□□□ -1.23
ATXN3-247ENST00000557311 C1orf167Q5SNV9 1468 aa7.39□□□□□ -1.23
ATXN3-247ENST00000557311 ADGRL3Q9HAR2 1447 aa7.39□□□□□ -1.23
ATXN3-247ENST00000557311 CFAP99D6REC4 459 aa7.39□□□□□ -1.23
ATXN3-247ENST00000557311 UNC5CLQ8IV45 518 aa7.39□□□□□ -1.23
ATXN3-247ENST00000557311 PTPN23Q9H3S7 1636 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 NUP155O75694 1391 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 NPHP3Q7Z494 1330 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 AXIN1O15169 862 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 LILRB3O75022 631 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 CCNYL3P0C7X3 344 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 RTL5Q5HYW3 569 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-247ENST00000557311 DEFB132Q7Z7B7 95 aa7.38□□□□□ -1.23
ATXN3-247ENST00000557311 BCL9LQ86UU0 1499 aa7.37□□□□□ -1.23
ATXN3-247ENST00000557311 BLMP54132 1417 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-247ENST00000557311 SMPD1P17405 629 aa7.37□□□□□ -1.23
ATXN3-247ENST00000557311 SMCPP49901 116 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-247ENST00000557311 FOXO3O43524 673 aa7.36□□□□□ -1.23
ATXN3-247ENST00000557311 AP1G2O75843 785 aa7.36□□□□□ -1.23
ATXN3-247ENST00000557311 PTPRNQ16849 979 aa7.36□□□□□ -1.23
ATXN3-247ENST00000557311 TUSC1Q2TAM9 212 aa7.36□□□□□ -1.23
ATXN3-247ENST00000557311 SEPT12Q8IYM1 358 aa7.36□□□□□ -1.23
ATXN3-247ENST00000557311 LRPPRCP42704 1394 aaKnown RBP7.35□□□□□ -1.23
ATXN3-247ENST00000557311 TTC24A2A3L6 582 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-247ENST00000557311 C11orf95C9JLR9 678 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-247ENST00000557311 J3QL48 77 aa7.35□□□□□ -1.23
ATXN3-247ENST00000557311 WNT7AO00755 349 aa7.35□□□□□ -1.23
ATXN3-247ENST00000557311 TRIM32Q13049 653 aa7.35□□□□□ -1.23
ATXN3-247ENST00000557311 DESI1Q6ICB0 168 aa7.35□□□□□ -1.23
ATXN3-247ENST00000557311 ROBO2Q9HCK4 1378 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 BAG6P46379 1132 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-247ENST00000557311 KCNH2Q12809 1159 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 VPS72Q15906 364 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 CTC1Q2NKJ3 1217 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 LYPD8Q6UX82 237 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 KRT27Q7Z3Y8 459 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 MRGPRX2Q96LB1 330 aa7.34□□□□□ -1.23
ATXN3-247ENST00000557311 NHSL1Q5SYE7 1610 aa7.34□□□□□ -1.24
ATXN3-247ENST00000557311 ROCK1Q13464 1354 aa7.33□□□□□ -1.24
ATXN3-247ENST00000557311 MYOM2P54296 1465 aa7.33□□□□□ -1.24
ATXN3-247ENST00000557311 AGERQ15109 404 aa7.33□□□□□ -1.24
ATXN3-247ENST00000557311 PTCRAQ6ISU1 281 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-247ENST00000557311 SNIP1Q8TAD8 396 aaKnown RBP7.33□□□□□ -1.24
ATXN3-247ENST00000557311 UNC93B1Q9H1C4 597 aa7.33□□□□□ -1.24
ATXN3-247ENST00000557311 EVA1BQ9NVM1 165 aa7.33□□□□□ -1.24
ATXN3-247ENST00000557311 UNC13BO14795 1591 aa7.33□□□□□ -1.24
ATXN3-247ENST00000557311 RPGRIP1LQ68CZ1 1315 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 CROCC2H7BZ55 1655 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 RALGAPBQ86X10 1494 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 PER1O15534 1290 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-247ENST00000557311 WFS1O76024 890 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
ATXN3-247ENST00000557311 SKOR1P84550 965 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 NFX1Q12986 1120 aaKnown RBP7.32□□□□□ -1.24
ATXN3-247ENST00000557311 MAP10Q9P2G4 905 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
ATXN3-247ENST00000557311 HFM1A2PYH4 1435 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
ATXN3-247ENST00000557311 SPATA31A3Q5VYP0 1347 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 CTDSPL2Q05D32 466 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 PSME1Q06323 249 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 KRT28Q7Z3Y7 464 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 XRN1Q8IZH2 1706 aaKnown RBP7.31□□□□□ -1.24
ATXN3-247ENST00000557311 BAP1Q92560 729 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 HPS1Q92902 700 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 GOPCQ9HD26 462 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 ATP13A2Q9NQ11 1180 aa7.31□□□□□ -1.24
ATXN3-247ENST00000557311 RFC5P40937 340 aa7.3□□□□□ -1.24
ATXN3-247ENST00000557311 R3HDM1Q15032 1099 aaKnown RBP7.3□□□□□ -1.24
ATXN3-247ENST00000557311 EHBP1Q8NDI1 1231 aa7.3□□□□□ -1.24
ATXN3-247ENST00000557311 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms