RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 USP42Q9H9J4 1324 aaKnown RBP21.95■■□□□ 1.1
VSX1-207ENST00000557285 MAPK8IP3Q9UPT6 1336 aa21.95■■□□□ 1.1
VSX1-207ENST00000557285 HEG1Q9ULI3 1381 aa21.95■■□□□ 1.1
VSX1-207ENST00000557285 ZPR1O75312 459 aa21.94■■□□□ 1.1
VSX1-207ENST00000557285 STARD3NLO95772 234 aa21.94■■□□□ 1.1
VSX1-207ENST00000557285 FKBP8Q14318 412 aa21.94■■□□□ 1.1
VSX1-207ENST00000557285 PARP3Q9Y6F1 533 aa21.94■■□□□ 1.1
VSX1-207ENST00000557285 COL15A1P39059 1388 aa21.94■■□□□ 1.1
VSX1-207ENST00000557285 USPL1Q5W0Q7 1092 aa21.93■■□□□ 1.1
VSX1-207ENST00000557285 PLEKHF1Q96S99 279 aa21.93■■□□□ 1.1
VSX1-207ENST00000557285 NFE2L2Q16236 605 aa21.91■■□□□ 1.1
VSX1-207ENST00000557285 THUMPD2Q9BTF0 503 aaKnown RBP21.91■■□□□ 1.1
VSX1-207ENST00000557285 PNNQ9H307 717 aaKnown RBP21.91■■□□□ 1.1
VSX1-207ENST00000557285 MIS18AQ9NYP9 233 aa21.91■■□□□ 1.1
VSX1-207ENST00000557285 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
VSX1-207ENST00000557285 HTATSF1O43719 755 aaKnown RBP21.9■■□□□ 1.1
VSX1-207ENST00000557285 PRAMEF22A3QJZ6 481 aa21.89■■□□□ 1.09
VSX1-207ENST00000557285 A1BGP04217 495 aa21.88■■□□□ 1.09
VSX1-207ENST00000557285 DDR1Q08345 913 aa21.88■■□□□ 1.09
VSX1-207ENST00000557285 CCDC146Q8IYE0 955 aa21.88■■□□□ 1.09
VSX1-207ENST00000557285 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
VSX1-207ENST00000557285 KIF13BQ9NQT8 1826 aa21.87■■□□□ 1.09
VSX1-207ENST00000557285 PIP4K2AP48426 406 aaPredicted RBP21.87■■□□□ 1.09
VSX1-207ENST00000557285 TAF7Q15545 349 aaPredicted RBP21.87■■□□□ 1.09
VSX1-207ENST00000557285 NARFQ9UHQ1 456 aa21.87■■□□□ 1.09
VSX1-207ENST00000557285 C10orf71Q711Q0 1435 aa21.87■■□□□ 1.09
VSX1-207ENST00000557285 A0A0G2JLW4 131 aa21.86■■□□□ 1.09
VSX1-207ENST00000557285 GRIN3BO60391 1043 aa21.86■■□□□ 1.09
VSX1-207ENST00000557285 WDR43Q15061 677 aaKnown RBP eCLIP21.86■■□□□ 1.09
VSX1-207ENST00000557285 USP16Q9Y5T5 823 aa21.86■■□□□ 1.09
VSX1-207ENST00000557285 PXDNLA1KZ92 1463 aa21.85■■□□□ 1.09
VSX1-207ENST00000557285 EIF5P55010 431 aaKnown RBP21.85■■□□□ 1.09
VSX1-207ENST00000557285 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
VSX1-207ENST00000557285 PRKRIP1Q9H875 184 aaPredicted RBP21.85■■□□□ 1.09
VSX1-207ENST00000557285 KIAA1551Q9HCM1 1747 aa21.84■■□□□ 1.09
VSX1-207ENST00000557285 SNRPA1P09661 255 aaKnown RBP21.84■■□□□ 1.09
VSX1-207ENST00000557285 BICDL1Q6ZP65 573 aa21.84■■□□□ 1.09
VSX1-207ENST00000557285 TBC1D2BQ9UPU7 963 aa21.84■■□□□ 1.09
VSX1-207ENST00000557285 RRP7AQ9Y3A4 280 aaKnown RBP21.84■■□□□ 1.09
VSX1-207ENST00000557285 A0A087WZG4 1122 aa21.83■■□□□ 1.09
VSX1-207ENST00000557285 POLRMTO00411 1230 aaKnown RBP21.83■■□□□ 1.09
VSX1-207ENST00000557285 DPEP1P16444 411 aa21.83■■□□□ 1.09
VSX1-207ENST00000557285 RIPK4P57078 832 aa21.83■■□□□ 1.09
VSX1-207ENST00000557285 NFIXQ14938 502 aa21.83■■□□□ 1.09
VSX1-207ENST00000557285 BCL2L12Q9HB09 334 aa21.83■■□□□ 1.09
VSX1-207ENST00000557285 TM4SF1P30408 202 aa21.82■■□□□ 1.08
VSX1-207ENST00000557285 NEUROD2Q15784 382 aa21.82■■□□□ 1.08
VSX1-207ENST00000557285 ZNF784Q8NCA9 323 aaPredicted RBP21.82■■□□□ 1.08
VSX1-207ENST00000557285 KDM3BQ7LBC6 1761 aa21.82■■□□□ 1.08
VSX1-207ENST00000557285 AFDNP55196 1824 aaKnown RBP21.81■■□□□ 1.08
VSX1-207ENST00000557285 IL6STP40189 918 aaPredicted RBP21.81■■□□□ 1.08
VSX1-207ENST00000557285 TGFB2P61812 414 aa21.81■■□□□ 1.08
VSX1-207ENST00000557285 BCS1LQ9Y276 419 aa21.81■■□□□ 1.08
VSX1-207ENST00000557285 SCN7AQ01118 1682 aa21.8■■□□□ 1.08
VSX1-207ENST00000557285 PNISRQ8TF01 805 aaKnown RBP21.8■■□□□ 1.08
VSX1-207ENST00000557285 TMPOP42166 694 aaKnown RBP21.79■■□□□ 1.08
VSX1-207ENST00000557285 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
VSX1-207ENST00000557285 ADAMTS8Q9UP79 889 aa21.78■■□□□ 1.08
VSX1-207ENST00000557285 LAMB4A4D0S4 1761 aa21.77■■□□□ 1.08
VSX1-207ENST00000557285 SERPINB2P05120 415 aa21.77■■□□□ 1.08
VSX1-207ENST00000557285 CHRNA5P30532 468 aa21.77■■□□□ 1.08
VSX1-207ENST00000557285 DZIP3Q86Y13 1208 aaKnown RBP21.77■■□□□ 1.08
VSX1-207ENST00000557285 TSPYL4Q9UJ04 414 aa21.77■■□□□ 1.08
VSX1-207ENST00000557285 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
VSX1-207ENST00000557285 BRCA1P38398 1863 aaKnown RBP21.75■■□□□ 1.07
VSX1-207ENST00000557285 BCORQ6W2J9 1755 aa21.75■■□□□ 1.07
VSX1-207ENST00000557285 EIF4A1P60842 406 aaKnown RBP21.75■■□□□ 1.07
VSX1-207ENST00000557285 LMOD3Q0VAK6 560 aa21.75■■□□□ 1.07
VSX1-207ENST00000557285 NGEFQ8N5V2 710 aa21.75■■□□□ 1.07
VSX1-207ENST00000557285 RUNDC1Q96C34 613 aa21.75■■□□□ 1.07
VSX1-207ENST00000557285 NBPF26B4DH59 902 aa21.74■■□□□ 1.07
VSX1-207ENST00000557285 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
VSX1-207ENST00000557285 NBPF10Q6P3W6 841 aaKnown RBP21.74■■□□□ 1.07
VSX1-207ENST00000557285 CCDC24Q8N4L8 307 aa21.74■■□□□ 1.07
VSX1-207ENST00000557285 NBPF15Q8N660 670 aa21.74■■□□□ 1.07
VSX1-207ENST00000557285 LAS1LQ9Y4W2 734 aaKnown RBP21.74■■□□□ 1.07
VSX1-207ENST00000557285 NRXN2Q9P2S2 1712 aa21.73■■□□□ 1.07
VSX1-207ENST00000557285 NPHP1O15259 732 aa21.73■■□□□ 1.07
VSX1-207ENST00000557285 GIGYF1O75420 1035 aaPredicted RBP21.73■■□□□ 1.07
VSX1-207ENST00000557285 KCNA3P22001 575 aa21.73■■□□□ 1.07
VSX1-207ENST00000557285 PIM2Q9P1W9 311 aa21.73■■□□□ 1.07
VSX1-207ENST00000557285 CARMIL3Q8ND23 1372 aa21.73■■□□□ 1.07
VSX1-207ENST00000557285 ARHGAP27Q6ZUM4 889 aa21.72■■□□□ 1.07
VSX1-207ENST00000557285 SETDB2Q96T68 719 aa21.71■■□□□ 1.07
VSX1-207ENST00000557285 MYL6BP14649 208 aa21.7■■□□□ 1.06
VSX1-207ENST00000557285 DALRD3Q5D0E6 543 aaKnown RBP21.7■■□□□ 1.06
VSX1-207ENST00000557285 C2CD5Q86YS7 1000 aa21.69■■□□□ 1.06
VSX1-207ENST00000557285 ZNF526Q8TF50 670 aaPredicted RBP21.69■■□□□ 1.06
VSX1-207ENST00000557285 CCDC184Q52MB2 194 aa21.68■■□□□ 1.06
VSX1-207ENST00000557285 TRIM35Q9UPQ4 493 aa21.68■■□□□ 1.06
VSX1-207ENST00000557285 ZNF652Q9Y2D9 606 aa21.68■■□□□ 1.06
VSX1-207ENST00000557285 ARFGEF1Q9Y6D6 1849 aa21.68■■□□□ 1.06
VSX1-207ENST00000557285 ANKRD31Q8N7Z5 1873 aa21.67■■□□□ 1.06
VSX1-207ENST00000557285 ATP10DQ9P241 1426 aa21.67■■□□□ 1.06
VSX1-207ENST00000557285 FAM177BA6PVY3 158 aa21.67■■□□□ 1.06
VSX1-207ENST00000557285 EIF2S2P20042 333 aaKnown RBP21.67■■□□□ 1.06
VSX1-207ENST00000557285 CNBD1Q8NA66 436 aa21.67■■□□□ 1.06
VSX1-207ENST00000557285 SENP3-EIF4A1A0A087X0R7 540 aa21.66■■□□□ 1.06
VSX1-207ENST00000557285 PRR5LQ6MZQ0 368 aa21.66■■□□□ 1.06
VSX1-207ENST00000557285 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms