RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MAP2K1Q02750 393 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-220ENST00000557037 USPL1Q5W0Q7 1092 aa17.63■□□□□ 0.41
PSEN1-220ENST00000557037 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
PSEN1-220ENST00000557037 ZNF831Q5JPB2 1677 aa17.62■□□□□ 0.41
PSEN1-220ENST00000557037 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
PSEN1-220ENST00000557037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.416e-6■□□□□ 8.9
PSEN1-220ENST00000557037 EMILIN1Q9Y6C2 1016 aa17.62■□□□□ 0.41
PSEN1-220ENST00000557037 WDR33Q9C0J8 1336 aaKnown RBP17.62■□□□□ 0.41
PSEN1-220ENST00000557037 PPM1GO15355 546 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-220ENST00000557037 EAPPQ56P03 285 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-220ENST00000557037 PUS7Q96PZ0 661 aaKnown RBP17.61■□□□□ 0.41
PSEN1-220ENST00000557037 NCAPD2Q15021 1401 aa17.61■□□□□ 0.41
PSEN1-220ENST00000557037 RASSF10A6NK89 507 aa17.6■□□□□ 0.41
PSEN1-220ENST00000557037 C21orf2O43822 256 aa17.6■□□□□ 0.41
PSEN1-220ENST00000557037 ZPR1O75312 459 aa17.6■□□□□ 0.41
PSEN1-220ENST00000557037 NFIXQ14938 502 aa17.6■□□□□ 0.41
PSEN1-220ENST00000557037 TAF1DQ9H5J8 278 aaPredicted RBP17.6■□□□□ 0.41
PSEN1-220ENST00000557037 TSKSQ9UJT2 592 aa17.6■□□□□ 0.41
PSEN1-220ENST00000557037 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
PSEN1-220ENST00000557037 AFDNP55196 1824 aaKnown RBP17.6■□□□□ 0.41
PSEN1-220ENST00000557037 DICER1Q9UPY3 1922 aaKnown RBP17.59■□□□□ 0.41
PSEN1-220ENST00000557037 DLEC1Q9Y238 1755 aa17.59■□□□□ 0.41
PSEN1-220ENST00000557037 ERVV-2B6SEH9 535 aa17.59■□□□□ 0.41
PSEN1-220ENST00000557037 H0YIN7 160 aa17.59■□□□□ 0.41
PSEN1-220ENST00000557037 EYA1Q99502 592 aa17.59■□□□□ 0.41
PSEN1-220ENST00000557037 ABT1Q9ULW3 272 aaKnown RBP17.59■□□□□ 0.41
PSEN1-220ENST00000557037 TONSLQ96HA7 1378 aa17.58■□□□□ 0.4
PSEN1-220ENST00000557037 IQCA1LA6NCM1 817 aa17.58■□□□□ 0.4
PSEN1-220ENST00000557037 NEUROD1Q13562 356 aa17.58■□□□□ 0.4
PSEN1-220ENST00000557037 ZNF622Q969S3 477 aaKnown RBP eCLIP17.58■□□□□ 0.4
PSEN1-220ENST00000557037 KIF24Q5T7B8 1368 aa17.57■□□□□ 0.4
PSEN1-220ENST00000557037 CARMIL3Q8ND23 1372 aa17.57■□□□□ 0.4
PSEN1-220ENST00000557037 SERPINB2P05120 415 aa17.57■□□□□ 0.4
PSEN1-220ENST00000557037 CABP4P57796 275 aa17.57■□□□□ 0.4
PSEN1-220ENST00000557037 GRM1Q13255 1194 aa17.57■□□□□ 0.4
PSEN1-220ENST00000557037 INTS5Q6P9B9 1019 aaKnown RBP17.57■□□□□ 0.4
PSEN1-220ENST00000557037 BEGAINQ9BUH8 593 aa17.57■□□□□ 0.4
PSEN1-220ENST00000557037 MCOLN1Q9GZU1 580 aa17.57■□□□□ 0.4
PSEN1-220ENST00000557037 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
PSEN1-220ENST00000557037 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
PSEN1-220ENST00000557037 TAOK3Q9H2K8 898 aa17.55■□□□□ 0.4
PSEN1-220ENST00000557037 ADAMTS7Q9UKP4 1686 aa17.54■□□□□ 0.4
PSEN1-220ENST00000557037 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
PSEN1-220ENST00000557037 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
PSEN1-220ENST00000557037 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-220ENST00000557037 CAPNS2Q96L46 248 aa17.53■□□□□ 0.4
PSEN1-220ENST00000557037 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
PSEN1-220ENST00000557037 TJP1Q07157 1748 aa17.52■□□□□ 0.39
PSEN1-220ENST00000557037 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.39
PSEN1-220ENST00000557037 SCN4AP35499 1836 aa17.51■□□□□ 0.39
PSEN1-220ENST00000557037 CASP8AP2Q9UKL3 1982 aa17.51■□□□□ 0.39
PSEN1-220ENST00000557037 SOS1Q07889 1333 aaPredicted RBP17.51■□□□□ 0.39
PSEN1-220ENST00000557037 LTBP3Q9NS15 1303 aa17.51■□□□□ 0.39
PSEN1-220ENST00000557037 HSP90AB1P08238 724 aaKnown RBP17.51■□□□□ 0.39
PSEN1-220ENST00000557037 CYP4F22Q6NT55 531 aa17.51■□□□□ 0.39
PSEN1-220ENST00000557037 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
PSEN1-220ENST00000557037 GPR101Q96P66 508 aaPredicted RBP17.51■□□□□ 0.39
PSEN1-220ENST00000557037 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
PSEN1-220ENST00000557037 NARFQ9UHQ1 456 aa17.51■□□□□ 0.39
PSEN1-220ENST00000557037 EPHX2P34913 555 aa17.5■□□□□ 0.39
PSEN1-220ENST00000557037 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
PSEN1-220ENST00000557037 TESK2Q96S53 571 aa17.5■□□□□ 0.39
PSEN1-220ENST00000557037 HACL1Q9UJ83 578 aa17.5■□□□□ 0.39
PSEN1-220ENST00000557037 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
PSEN1-220ENST00000557037 DGKZQ13574 1117 aa17.49■□□□□ 0.39
PSEN1-220ENST00000557037 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
PSEN1-220ENST00000557037 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
PSEN1-220ENST00000557037 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
PSEN1-220ENST00000557037 ZNF541Q9H0D2 1346 aa17.48■□□□□ 0.39
PSEN1-220ENST00000557037 FMR1Q06787 632 aaKnown RBP eCLIP17.48■□□□□ 0.39
PSEN1-220ENST00000557037 AOC2O75106 756 aa17.47■□□□□ 0.39
PSEN1-220ENST00000557037 ECE1P42892 770 aa17.47■□□□□ 0.39
PSEN1-220ENST00000557037 SOX10P56693 466 aa17.47■□□□□ 0.39
PSEN1-220ENST00000557037 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.39
PSEN1-220ENST00000557037 COL15A1P39059 1388 aa17.46■□□□□ 0.39
PSEN1-220ENST00000557037 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
PSEN1-220ENST00000557037 MTHFSP49914 203 aa17.46■□□□□ 0.39
PSEN1-220ENST00000557037 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
PSEN1-220ENST00000557037 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
PSEN1-220ENST00000557037 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.38
PSEN1-220ENST00000557037 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
PSEN1-220ENST00000557037 COL11A2P13942 1736 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-220ENST00000557037 PDE6BP35913 854 aa17.45■□□□□ 0.38
PSEN1-220ENST00000557037 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
PSEN1-220ENST00000557037 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
PSEN1-220ENST00000557037 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
PSEN1-220ENST00000557037 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
PSEN1-220ENST00000557037 PRPF38BQ5VTL8 546 aaKnown RBP17.44■□□□□ 0.38
PSEN1-220ENST00000557037 PNMA8AQ86V59 439 aaPredicted RBP17.44■□□□□ 0.38
PSEN1-220ENST00000557037 BRIP1Q9BX63 1249 aa17.44■□□□□ 0.38
PSEN1-220ENST00000557037 ZBTB1Q9Y2K1 713 aa17.44■□□□□ 0.38
PSEN1-220ENST00000557037 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
PSEN1-220ENST00000557037 PRPF40BQ6NWY9 871 aaKnown RBP17.43■□□□□ 0.38
PSEN1-220ENST00000557037 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
PSEN1-220ENST00000557037 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
PSEN1-220ENST00000557037 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
PSEN1-220ENST00000557037 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
PSEN1-220ENST00000557037 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
PSEN1-220ENST00000557037 ZNF277Q9NRM2 450 aaPredicted RBP17.41■□□□□ 0.38
PSEN1-220ENST00000557037 TRAF5O00463 557 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms