RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
ABCD4-226ENST00000556971 ASAP1Q9ULH1 1129 aa17.77■□□□□ 0.44
ABCD4-226ENST00000556971 HPS5Q9UPZ3 1129 aa17.77■□□□□ 0.44
ABCD4-226ENST00000556971 MKI67P46013 3256 aaKnown RBP17.77■□□□□ 0.43
ABCD4-226ENST00000556971 CENPJQ9HC77 1338 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-226ENST00000556971 CGNL1Q0VF96 1302 aa17.75■□□□□ 0.43
ABCD4-226ENST00000556971 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
ABCD4-226ENST00000556971 COL5A3P25940 1745 aaPredicted RBP17.75■□□□□ 0.43
ABCD4-226ENST00000556971 AFDNP55196 1824 aaKnown RBP17.75■□□□□ 0.43
ABCD4-226ENST00000556971 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
ABCD4-226ENST00000556971 CYP27B1O15528 508 aa17.74■□□□□ 0.43
ABCD4-226ENST00000556971 CST9Q5W186 159 aa17.74■□□□□ 0.43
ABCD4-226ENST00000556971 TAOK3Q9H2K8 898 aa17.74■□□□□ 0.43
ABCD4-226ENST00000556971 COL6A3P12111 3177 aa17.73■□□□□ 0.43
ABCD4-226ENST00000556971 C21orf2O43822 256 aa17.73■□□□□ 0.43
ABCD4-226ENST00000556971 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
ABCD4-226ENST00000556971 C2CD5Q86YS7 1000 aa17.73■□□□□ 0.43
ABCD4-226ENST00000556971 COLQQ9Y215 455 aaPredicted RBP17.73■□□□□ 0.43
ABCD4-226ENST00000556971 KDRP35968 1356 aa17.73■□□□□ 0.43
ABCD4-226ENST00000556971 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
ABCD4-226ENST00000556971 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
ABCD4-226ENST00000556971 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
ABCD4-226ENST00000556971 TRAF5O00463 557 aa17.72■□□□□ 0.43
ABCD4-226ENST00000556971 RPS6KA4O75676 772 aa17.72■□□□□ 0.43
ABCD4-226ENST00000556971 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
ABCD4-226ENST00000556971 USP42Q9H9J4 1324 aaKnown RBP17.72■□□□□ 0.43
ABCD4-226ENST00000556971 CTU1Q7Z7A3 348 aaKnown RBP17.71■□□□□ 0.43
ABCD4-226ENST00000556971 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.42
ABCD4-226ENST00000556971 LTBP3Q9NS15 1303 aa17.71■□□□□ 0.42
ABCD4-226ENST00000556971 MNX1P50219 401 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-226ENST00000556971 ZIC5Q96T25 663 aa17.7■□□□□ 0.42
ABCD4-226ENST00000556971 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
ABCD4-226ENST00000556971 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
ABCD4-226ENST00000556971 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
ABCD4-226ENST00000556971 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
ABCD4-226ENST00000556971 HOXC9P31274 260 aa17.68■□□□□ 0.42
ABCD4-226ENST00000556971 SAPCD2Q86UD0 394 aa17.68■□□□□ 0.42
ABCD4-226ENST00000556971 SLC4A9Q96Q91 983 aa17.68■□□□□ 0.42
ABCD4-226ENST00000556971 CEP290O15078 2479 aa17.67■□□□□ 0.42
ABCD4-226ENST00000556971 CARMIL3Q8ND23 1372 aa17.67■□□□□ 0.42
ABCD4-226ENST00000556971 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
ABCD4-226ENST00000556971 TM4SF1P30408 202 aa17.67■□□□□ 0.42
ABCD4-226ENST00000556971 MPNDQ8N594 471 aa17.67■□□□□ 0.42
ABCD4-226ENST00000556971 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
ABCD4-226ENST00000556971 H0YIN7 160 aa17.66■□□□□ 0.42
ABCD4-226ENST00000556971 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
ABCD4-226ENST00000556971 ZNF622Q969S3 477 aaKnown RBP eCLIP17.65■□□□□ 0.42
ABCD4-226ENST00000556971 MAP3K19Q56UN5 1328 aa17.65■□□□□ 0.42
ABCD4-226ENST00000556971 SBNO2Q9Y2G9 1366 aa17.65■□□□□ 0.42
ABCD4-226ENST00000556971 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
ABCD4-226ENST00000556971 EVC2Q86UK5 1308 aa17.64■□□□□ 0.41
ABCD4-226ENST00000556971 ZNF831Q5JPB2 1677 aa17.64■□□□□ 0.41
ABCD4-226ENST00000556971 COL11A2P13942 1736 aaPredicted RBP17.64■□□□□ 0.41
ABCD4-226ENST00000556971 CACNA1SQ13698 1873 aa17.63■□□□□ 0.41
ABCD4-226ENST00000556971 AMPHP49418 695 aa17.63■□□□□ 0.41
ABCD4-226ENST00000556971 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
ABCD4-226ENST00000556971 NOGQ13253 232 aa17.62■□□□□ 0.41
ABCD4-226ENST00000556971 BICDL1Q6ZP65 573 aa17.62■□□□□ 0.41
ABCD4-226ENST00000556971 SAGE1Q9NXZ1 904 aa17.62■□□□□ 0.41
ABCD4-226ENST00000556971 INSRP06213 1382 aa17.62■□□□□ 0.41
ABCD4-226ENST00000556971 CELF2O95319 508 aaKnown RBP17.61■□□□□ 0.41
ABCD4-226ENST00000556971 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
ABCD4-226ENST00000556971 HHIPL1Q96JK4 782 aa17.6■□□□□ 0.41
ABCD4-226ENST00000556971 STAC3Q96MF2 364 aa17.6■□□□□ 0.41
ABCD4-226ENST00000556971 ANKRD31Q8N7Z5 1873 aa17.59■□□□□ 0.41
ABCD4-226ENST00000556971 TRPA1O75762 1119 aa17.59■□□□□ 0.41
ABCD4-226ENST00000556971 NFIXQ14938 502 aa17.59■□□□□ 0.41
ABCD4-226ENST00000556971 NKX1-1Q15270 411 aaPredicted RBP17.59■□□□□ 0.41
ABCD4-226ENST00000556971 FBLN1P23142 703 aa17.58■□□□□ 0.4
ABCD4-226ENST00000556971 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
ABCD4-226ENST00000556971 AKAP11Q9UKA4 1901 aa17.58■□□□□ 0.4
ABCD4-226ENST00000556971 SLX4Q8IY92 1834 aa17.58■□□□□ 0.4
ABCD4-226ENST00000556971 SERPINB2P05120 415 aa17.57■□□□□ 0.4
ABCD4-226ENST00000556971 CRKLP46109 303 aaKnown RBP17.57■□□□□ 0.4
ABCD4-226ENST00000556971 RNF186Q9NXI6 227 aa17.57■□□□□ 0.4
ABCD4-226ENST00000556971 COL25A1Q9BXS0 654 aaPredicted RBP17.56■□□□□ 0.4
ABCD4-226ENST00000556971 PKN2Q16513 984 aaKnown RBP17.55■□□□□ 0.4
ABCD4-226ENST00000556971 ZNF408Q9H9D4 720 aa17.55■□□□□ 0.4
ABCD4-226ENST00000556971 ZPR1O75312 459 aa17.54■□□□□ 0.4
ABCD4-226ENST00000556971 SYNE4Q8N205 404 aa17.54■□□□□ 0.4
ABCD4-226ENST00000556971 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
ABCD4-226ENST00000556971 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
ABCD4-226ENST00000556971 POTEFA5A3E0 1075 aa17.52■□□□□ 0.4
ABCD4-226ENST00000556971 LMOD1P29536 600 aaPredicted RBP17.52■□□□□ 0.4
ABCD4-226ENST00000556971 GPC2Q8N158 579 aa17.52■□□□□ 0.4
ABCD4-226ENST00000556971 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
ABCD4-226ENST00000556971 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
ABCD4-226ENST00000556971 EDC4Q6P2E9 1401 aaKnown RBP17.51■□□□□ 0.39
ABCD4-226ENST00000556971 HDAC9Q9UKV0 1011 aa17.51■□□□□ 0.39
ABCD4-226ENST00000556971 BCORQ6W2J9 1755 aa17.51■□□□□ 0.39
ABCD4-226ENST00000556971 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
ABCD4-226ENST00000556971 EPS15P42566 896 aa17.5■□□□□ 0.39
ABCD4-226ENST00000556971 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
ABCD4-226ENST00000556971 OTUD5Q96G74 571 aa17.5■□□□□ 0.39
ABCD4-226ENST00000556971 PAPPA2Q9BXP8 1791 aa17.49■□□□□ 0.39
ABCD4-226ENST00000556971 RANBP2P49792 3224 aaKnown RBP17.49■□□□□ 0.39
ABCD4-226ENST00000556971 KIF23Q02241 960 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-226ENST00000556971 GLIS2Q9BZE0 524 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-226ENST00000556971 GJA3Q9Y6H8 435 aa17.49■□□□□ 0.39
ABCD4-226ENST00000556971 TJP1Q07157 1748 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms